Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0392221 Lupinus albus HOM05D006585 ORTHO05D007798 2.1e-109 399.1 199 100.0
Lj4g0008721 Lotus japonicus HOM05D006585 ORTHO05D007798 3.4e-72 275.4 207 68.6
Phvul.003G063800 Phaseolus vulgaris HOM05D006585 ORTHO05D007798 2.2e-71 272.7 209 67.9
arahy.Tifrunner.gnm1.ann1.I6QGYY Arachis hypogaea HOM05D006585 ORTHO05D007798 4.2e-70 268.5 207 66.7
Glyma.18G143200 Glycine max HOM05D006585 ORTHO05D007798 2.7e-69 265.8 209 67.0
arahy.Tifrunner.gnm1.ann1.QD46ZG Arachis hypogaea HOM05D006585 ORTHO05D007798 7.4e-67 257.7 207 65.2
Psat1g023160 Pisum sativum HOM05D006585 ORTHO05D007798 6.9e-65 251.1 206 66.5
Medtr2g079800 Medicago truncatula HOM05D006585 ORTHO05D007798 2.2e-63 246.1 208 64.9
Ca_22577_v3 Cicer arietinum L. HOM05D006585 ORTHO05D007798 1.4e-62 243.4 177 69.5
VMungo0251G2192 Vigna mungo HOM05D006585 ORTHO05D007798 2.5e-62 242.7 180 68.3
Medtr8g069560 Medicago truncatula HOM05D006585 ORTHO05D007798 1.7e-58 229.9 232 57.8
TPR.G34666 Trifolium pratense HOM05D006585 ORTHO05D007798 1.8e-52 209.9 174 63.8
QL03p058556 Quercus lobata HOM05D006585 ORTHO05D007798 3.0e-52 209.1 209 57.4
Duzib248G0505 Durio zibethinus HOM05D006585 ORTHO05D007798 5.0e-47 191.8 211 53.6
Cfa009198 Carpinus fangiana HOM05D006585 ORTHO05D007798 1.2e-45 187.2 210 52.9
Thecc.02G257200 Theobroma cacao HOM05D006585 ORTHO05D007798 7.5e-43 177.9 211 51.2
Gohir.A03G136500 Gossypium hirsutum HOM05D006585 ORTHO05D007798 1.3e-42 177.2 209 49.3
Potri.010G044800 Populus trichocarpa HOM05D006585 ORTHO05D007798 2.2e-42 176.4 211 50.7
Sed0016045 Sechium edule HOM05D006585 ORTHO05D007798 6.3e-42 174.9 212 48.1
TWI36G0027 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 1.2e-40 170.6 211 49.8
CiPaw.05G183700 Carya illinoinensis HOM05D006585 ORTHO05D007798 1.6e-40 170.2 207 50.7
Gorai.005G179800 Gossypium raimondii HOM05D006585 ORTHO05D007798 1.6e-40 170.2 209 48.3
Dinv24805 Davidia involucrata HOM05D006585 ORTHO05D007798 1.1e-38 164.1 209 51.7
Sabra10G0023300 Salix brachista HOM05D000740 ORTHO05D003236 7.2e-38 161.4 236 46.6
Haze_12236 Corylus avellana HOM05D006585 ORTHO05D007798 1.6e-37 160.2 186 53.8
Ciclev10033875m.g Citrus clementina HOM05D006585 ORTHO05D007798 2.1e-37 159.8 206 48.5
GSVIVG01004087001 Vitis vinifera HOM05D006585 ORTHO05D007798 2.1e-37 159.8 203 51.2
Cpa.g.sc33.3 Carica papaya HOM05D006585 ORTHO05D007798 2.7e-37 159.5 195 50.3
RcHm_v2.0_Chr4g0433351 Rosa chinensis HOM05D006585 ORTHO05D007798 1.4e-36 157.1 233 43.3
ClCG08G017740 Citrullus lanatus HOM05D006585 ORTHO05D007798 1.8e-36 156.8 226 43.8
TAR371G0523 Trochodendron aralioides HOM05D006585 ORTHO05D007798 2.3e-36 156.4 210 47.6
COL.COLO4_24245 Corchorus olitorius HOM05D006585 ORTHO05D002520 3.4e-35 152.5 191 48.7
Lj6C811T17 Lonicera japonica HOM05D006585 ORTHO05D007798 8.3e-34 147.9 217 46.5
FvH4_4g25900 Fragaria vesca HOM05D006585 ORTHO05D007798 1.4e-33 147.1 233 42.5
TWI75G0333 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 7.0e-33 144.8 207 44.9
CANSAT01G1755 Cannabis sativa HOM05D006585 ORTHO05D007798 2.7e-32 142.9 237 40.5
MD13G1097800 Malus domestica HOM05D006585 ORTHO05D007798 2.7e-32 142.9 257 38.1
Aqoxy5G03808 Aquilegia oxysepala HOM05D006585 ORTHO05D007798 5.0e-31 138.7 212 45.3
Sopen05g008150 Solanum pennellii HOM05D006585 ORTHO05D007798 1.1e-30 137.5 219 42.9
Prupe.1G247500 Prunus persica HOM05D006585 ORTHO05D007798 1.5e-30 137.1 251 40.2
Actinidia27800 Actinidia chinensis HOM05D006585 ORTHO05D007798 3.2e-30 136.0 245 41.6
THA.LOC104823651 Tarenaya hassleriana HOM05D006585 ORTHO05D007798 3.2e-30 136.0 209 45.9
Prupe.1G247600 Prunus persica HOM05D006585 ORTHO05D007798 5.5e-30 135.2 182 46.7
Nn3g16750 Nelumbo nucifera HOM05D006585 ORTHO05D007798 2.8e-29 132.9 205 44.4
Dinv20613 Davidia involucrata HOM05D006585 ORTHO05D007798 3.6e-29 132.5 208 42.8
FAN17G2552 Fragaria x ananassa HOM05D006585 ORTHO05D007798 4.7e-29 132.1 245 40.0
DCAR_031138 Daucus carota HOM05D006585 ORTHO05D007798 8.0e-29 131.3 213 40.4
Oeu049180.1 Olea europaea HOM05D006585 ORTHO05D007798 3.4e-27 125.9 212 39.2
Manes.13G025900 Manihot esculenta HOM05D006585 ORTHO05D007798 1.3e-26 124.0 192 42.7
MBI10_g00733_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 8.3e-26 121.3 217 37.3
FAN12G1097 Fragaria x ananassa HOM05D006585 ORTHO05D007798 2.4e-25 119.8 225 38.7
FAN12G1379 Fragaria x ananassa HOM05D006585 ORTHO05D007798 2.4e-25 119.8 225 38.7
AL1G21590 Arabidopsis lyrata HOM05D006585 ORTHO05D007798 2.0e-24 116.7 252 34.5
Solyc05g013360.3 Solanum lycopersicum HOM05D006585 ORTHO05D007798 2.0e-24 116.7 201 41.3
AT1G10710 Arabidopsis thaliana HOM05D006585 ORTHO05D007798 3.5e-24 115.9 252 33.3
Gohir.D02G159700 Gossypium hirsutum HOM05D006585 ORTHO05D007798 1.0e-23 114.4 178 41.0
Carub.0001s1022 Capsella rubella HOM05D006585 ORTHO05D007798 2.9e-23 112.8 255 34.9
Glyma.08G283200 Glycine max HOM05D006585 ORTHO05D007798 2.9e-23 112.8 91 63.7
MD13G1097900 Malus domestica HOM05D006585 ORTHO05D007798 2.9e-23 112.8 245 36.7
PGR119G1584 Punica granatum HOM05D006585 ORTHO05D007798 5.0e-23 112.1 180 44.4
Peaxi162Scf00128g00033 Petunia axillaris HOM05D006585 ORTHO05D007798 6.6e-23 111.7 211 39.3
HanXRQChr17g0539731 Helianthus annuus HOM05D006585 ORTHO05D007798 8.6e-23 111.3 221 39.4
Nitab4.5_0002255g0100 Nicotiana tabacum HOM05D006585 ORTHO05D007798 2.5e-22 109.8 194 40.2
CARHR010890 Cardamine hirsuta HOM05D006585 ORTHO05D007798 4.3e-22 109.0 236 33.9
AUR62024297 Chenopodium quinoa HOM05D006585 ORTHO05D007798 1.4e-20 104.0 215 37.7
Cc11_g15560 Coffea canephora HOM05D006585 ORTHO05D007798 1.8e-20 103.6 211 38.4
MBI16_g23844_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 1.8e-20 103.6 218 35.8
EL10Ac6g13783 Beta vulgaris HOM05D006585 ORTHO05D007798 2.3e-20 103.2 214 35.0
SGA_v2.0_scaffold63G21726 Striga asiatica HOM05D006585 ORTHO05D007798 2.3e-20 103.2 219 33.3
Sp1g09410 Schrenkiella parvula HOM05D006585 ORTHO05D007798 5.2e-20 102.1 251 33.9
TAR629G0056 Trochodendron aralioides HOM05D006585 ORTHO05D007798 6.8e-20 101.7 174 41.4
Sc04g0009420 Simmondsia chinensis HOM05D006585 ORTHO05D007798 1.5e-19 100.5 212 36.3
Lsat_1_v5_gn_3_28841 Lactuca sativa HOM05D006585 ORTHO05D007798 2.6e-19 99.8 216 34.7
GSVIVG01007676001 Vitis vinifera HOM05D006585 ORTHO05D007798 7.5e-19 98.2 209 35.4
Atru.chr11.2134 Acer truncatum HOM05D006585 ORTHO05D007798 3.2e-17 92.8 140 46.4
Thhalv10007956m.g Eutrema salsugineum HOM05D006585 ORTHO05D007798 4.1e-17 92.4 280 30.0
Ah.03g133160 Amaranthus hybridus HOM05D006585 ORTHO05D007798 1.6e-16 90.5 214 32.7
Atru.chr11.2118 Acer truncatum HOM05D006585 ORTHO05D007798 1.3e-15 87.4 140 44.3
BcaC07g41800 Brassica carinata HOM05D006585 ORTHO05D007798 2.3e-15 86.7 263 29.3
SGA_v2.0_scaffold87G27084 Striga asiatica HOM05D006585 ORTHO05D007798 2.3e-15 86.7 222 30.6
Aa31LG1G4120 Aethionema arabicum HOM05D006585 ORTHO05D007798 6.6e-15 85.1 191 33.5
Zm00001eb382430 Zea mays HOM05D006585 ORTHO05D007798 2.5e-14 83.2 254 29.5
BcaB08g37368 Brassica carinata HOM05D006585 ORTHO05D007798 2.1e-13 80.1 316 25.3
C08p48610 Brassica napus HOM05D006585 ORTHO05D007798 2.1e-13 80.1 284 26.8
Nitab4.5_0002552g0050 Nicotiana tabacum HOM05D006585 ORTHO05D007798 2.1e-13 80.1 191 33.5
Actinidia08143 Actinidia chinensis HOM05D006585 ORTHO05D007798 1.4e-12 77.4 197 35.5
BraA09t41832Z Brassica rapa HOM05D006585 ORTHO05D007798 1.8e-12 77.0 290 26.9
Migut.E00193 Erythranthe guttata HOM05D006585 ORTHO05D007798 1.8e-12 77.0 180 32.8
COL.COLO4_30156 Corchorus olitorius HOM05D006585 ORTHO05D007798 5.2e-12 75.5 206 31.6
ATR1154G038 Amborella trichopoda HOM05D006585 ORTHO05D007798 6.8e-12 75.1 209 33.0
Oeu056719.1 Olea europaea HOM05D006585 ORTHO05D007798 1.2e-11 74.3 174 33.3
A09p64570 Brassica napus HOM05D006585 ORTHO05D007798 2.6e-11 73.2 285 27.4
HPP92_008334 Vanilla planifolia HOM05D034240 ORTHO05D007798 7.5e-11 71.6 215 29.3
Glyma.08G283250 Glycine max HOM05D006585 ORTHO05D007798 4.9e-10 68.9 60 58.3
BolC8t52400H Brassica oleracea HOM05D006585 ORTHO05D007798 6.4e-10 68.6 329 24.3
SalBow8G2270 Salvia bowleyana HOM05D006585 ORTHO05D007798 4.1e-09 65.9 200 30.0
Rhsim12G0041300 Rhododendron simsii HOM05D006585 ORTHO05D007798 7.0e-09 65.1 134 34.3
ECA246G2324 Erigeron canadensis HOM05D000225 ORTHO05D002520 1.0e-07 61.2 170 34.7
SGA_v2.0_scaffold779G53588 Striga asiatica HOM05D006585 ORTHO05D007798 1.0e-07 61.2 87 41.4
SGA_v2.0_scaffold34G13586 Striga asiatica HOM05D006585 ORTHO05D007798 2.3e-07 60.1 87 41.4
PSO832G2940 Papaver somniferum HOM05D006585 ORTHO05D007798 8.6e-07 58.2 151 27.8
SHI17755 Sapria himalayana HOM05D006585 ORTHO05D007798 1.5e-06 57.4 168 33.3
FAN22G0568 Fragaria x ananassa HOM05D006585 ORTHO05D007798 1.9e-06 57.0 60 45.0
DCAR_005656 Daucus carota HOM05D006585 ORTHO05D007798 4.3e-06 55.8 55 54.5
FAN07G1571 Fragaria x ananassa HOM05D006585 ORTHO05D007798 7.3e-06 55.1 54 48.1


User provided reference genes

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