Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0392181 Lupinus albus HOM05D002002 ORTHO05D008797 0.0e+00 1637.9 948 100.0
Lalb_Chr05g0228431 Lupinus albus HOM05D002002 ORTHO05D008797 0.0e+00 1095.5 860 75.8
Glyma.18G143900 Glycine max HOM05D002002 ORTHO05D008797 2.4e-293 1012.3 929 65.4
Phvul.003G065200 Phaseolus vulgaris HOM05D002002 ORTHO05D008797 3.5e-292 1008.4 972 65.0
Glyma.08G282400 Glycine max HOM05D002002 ORTHO05D008797 2.4e-272 942.6 909 66.3
arahy.Tifrunner.gnm1.ann1.PHTA8N Arachis hypogaea HOM05D002002 ORTHO05D008711 1.3e-262 910.2 907 62.6
Psat4g115320 Pisum sativum HOM05D002002 ORTHO05D008797 2.1e-260 902.9 892 64.7
Lj4g0017193 Lotus japonicus HOM05D002002 ORTHO05D008797 3.7e-257 892.1 887 61.8
arahy.Tifrunner.gnm1.ann1.YSSX7I Arachis hypogaea HOM05D002002 ORTHO05D008797 4.5e-255 885.2 888 63.4
Ca_22584_v3 Cicer arietinum L. HOM05D002002 ORTHO05D008711 9.1e-248 860.9 813 67.5
TPR.G17755 Trifolium pratense HOM05D002002 ORTHO05D008711 6.5e-161 572.4 530 64.3
Cfa009210 Carpinus fangiana HOM05D002002 ORTHO05D008797 6.7e-158 562.4 904 46.2
Dinv15235 Davidia involucrata HOM05D002002 ORTHO05D008797 1.5e-157 561.2 924 45.3
MD16G1102300 Malus domestica HOM05D002002 ORTHO05D008797 3.2e-152 543.5 895 46.4
Haze_12247 Corylus avellana HOM05D002002 ORTHO05D008711 1.6e-151 541.2 853 46.7
Atru.chr11.2102 Acer truncatum HOM05D002002 ORTHO05D008797 6.9e-147 525.8 907 45.8
QL03p058108 Quercus lobata HOM05D002002 ORTHO05D008797 6.5e-145 519.2 677 50.1
CiPaw.05G182600 Carya illinoinensis HOM05D002002 ORTHO05D008797 1.8e-142 511.1 895 43.8
CsaV3_5G031140 Cucumis sativus L. HOM05D002002 ORTHO05D008797 2.6e-141 507.3 937 45.6
MELO3C011952.2 Cucumis melo HOM05D002002 ORTHO05D008711 1.8e-134 484.6 920 43.7
Potri.010G046000 Populus trichocarpa HOM05D002002 ORTHO05D008797 3.0e-134 483.8 920 43.0
Manes.13G024600 Manihot esculenta HOM05D002002 ORTHO05D008797 8.8e-134 482.3 918 43.9
Duzib248G0209 Durio zibethinus HOM05D002002 ORTHO05D008797 8.2e-132 475.7 1030 40.6
RcHm_v2.0_Chr4g0432951 Rosa chinensis HOM05D002002 ORTHO05D008797 1.3e-129 468.4 922 42.5
Ciclev10030634m.g Citrus clementina HOM05D002002 ORTHO05D008797 5.5e-128 463.0 900 43.3
Duzib251G0042 Durio zibethinus HOM05D002002 ORTHO05D008797 5.2e-126 456.4 937 41.5
Sed0005394 Sechium edule HOM05D002002 ORTHO05D008797 6.8e-126 456.1 870 43.3
FAN17G1038 Fragaria x ananassa HOM05D002002 ORTHO05D008711 5.7e-125 453.0 863 42.6
Cpa.g.sc33.18 Carica papaya HOM05D002002 ORTHO05D008797 7.5e-125 452.6 860 41.9
MD13G1101700 Malus domestica HOM05D002002 ORTHO05D008797 1.3e-124 451.8 858 43.8
Sabra08G0141500 Salix brachista HOM05D002002 ORTHO05D008797 4.5e-122 443.4 901 41.5
GSVIVG01005756001 Vitis vinifera HOM05D002002 ORTHO05D008797 1.7e-121 441.4 548 54.6
Dinv24786 Davidia involucrata HOM05D002002 ORTHO05D008797 3.8e-121 440.3 960 40.4
ClCG05G025730 Citrullus lanatus HOM05D002002 ORTHO05D008797 1.5e-117 428.3 983 39.5
TPR.G3029 Trifolium pratense HOM05D002002 ORTHO05D008797 3.7e-116 423.7 686 46.1
Gohir.D04G179800 Gossypium hirsutum HOM05D002002 ORTHO05D008797 4.1e-115 420.2 931 40.0
Gorai.012G173000 Gossypium raimondii HOM05D002002 ORTHO05D008797 7.0e-115 419.5 931 40.0
FvH4_4g25541 Fragaria vesca HOM05D002002 ORTHO05D008797 7.7e-114 416.0 895 40.3
TAR374G0715 Trochodendron aralioides HOM05D002002 ORTHO05D008797 2.3e-113 414.5 960 41.7
Actinidia15094 Actinidia chinensis HOM05D002002 ORTHO05D008797 6.6e-113 412.9 998 40.5
CANSAT01G0132 Cannabis sativa HOM05D002002 ORTHO05D008797 3.3e-112 410.6 910 41.8
Nitab4.5_0000007g0090 Nicotiana tabacum HOM05D002002 ORTHO05D008797 4.0e-110 403.7 926 40.0
Eucgr.H02500 Eucalyptus grandis HOM05D002002 ORTHO05D008797 3.7e-108 397.1 946 37.7
Gohir.A04G136700 Gossypium hirsutum HOM05D002002 ORTHO05D008797 1.8e-107 394.8 818 41.1
Prupe.1G244100 Prunus persica HOM05D002002 ORTHO05D008797 5.9e-106 389.8 712 43.4
CSS0037172 Camellia sinensis var. sinensis HOM05D002002 ORTHO05D008797 7.8e-106 389.4 912 41.8
Thecc.02G259600 Theobroma cacao HOM05D002002 ORTHO05D008797 3.9e-105 387.1 971 39.3
Potri.008G186900 Populus trichocarpa HOM05D002002 ORTHO05D008797 6.6e-105 386.3 909 40.6
Nn3g16709 Nelumbo nucifera HOM05D002002 ORTHO05D008797 4.0e-102 377.1 1001 39.5
Aqoxy3G01206 Aquilegia oxysepala HOM05D002002 ORTHO05D008797 1.3e-100 372.1 971 38.2
Nn4g22624 Nelumbo nucifera HOM05D002002 ORTHO05D008797 4.1e-99 367.1 990 37.9
TWI75G1475 Tripterygium wilfordii HOM05D002002 ORTHO05D008797 9.2e-99 365.9 929 37.9
Migut.K00597 Erythranthe guttata HOM05D002002 ORTHO05D008797 1.7e-97 361.7 962 37.8
EL10Ac6g13807 Beta vulgaris HOM05D002002 ORTHO05D008797 3.3e-96 357.5 863 40.6
PSO017G3282 Papaver somniferum HOM05D002002 ORTHO05D008797 3.4e-93 347.4 917 36.6
AUR62024280 Chenopodium quinoa HOM05D002002 ORTHO05D008797 5.8e-93 346.7 794 40.9
Nitab4.5_0009240g0010 Nicotiana tabacum HOM05D002002 ORTHO05D008797 2.2e-92 344.7 849 40.9
CAN.G832.3 Capsicum annuum HOM05D002002 ORTHO05D008797 3.2e-91 340.9 858 37.2
AUR62005461 Chenopodium quinoa HOM05D002002 ORTHO05D008797 5.4e-91 340.1 860 39.8
Peaxi162Scf00128g00134 Petunia axillaris HOM05D002002 ORTHO05D008797 1.6e-90 338.6 937 38.0
ECA233G4520 Erigeron canadensis HOM05D002002 ORTHO05D008797 8.1e-87 326.2 903 37.7
FAN22G2309 Fragaria x ananassa HOM05D002002 ORTHO05D008797 1.2e-85 322.4 680 39.7
PGR119G0425 Punica granatum HOM05D002002 ORTHO05D008797 3.8e-84 317.4 910 37.0
Sc11g0000970 Simmondsia chinensis HOM05D002002 ORTHO05D008797 4.1e-83 313.9 951 38.1
COL.COLO4_24277 Corchorus olitorius HOM05D002002 ORTHO05D008797 3.9e-81 307.4 738 36.4
Sopen05g008360 Solanum pennellii HOM05D002002 ORTHO05D008797 5.1e-81 307.0 948 35.3
Hund25388 Selenicereus undatus HOM05D002002 ORTHO05D008797 1.1e-80 305.8 953 36.2
vmacro16196 Vaccinium macrocarpon HOM05D002002 ORTHO05D008797 1.8e-78 298.5 883 38.4
DCAR_031153 Daucus carota HOM05D002002 ORTHO05D008797 1.1e-75 289.3 862 38.7
TPR.G3025 Trifolium pratense HOM05D002002 ORTHO05D008797 3.2e-75 287.7 248 66.5
TAR622G0079 Trochodendron aralioides HOM05D002002 ORTHO05D008797 4.2e-75 287.3 873 36.0
Oeu059906.4 Olea europaea HOM05D002002 ORTHO05D008797 7.1e-75 286.6 893 34.2
SalBow2G1965 Salvia bowleyana HOM05D002002 ORTHO05D008797 1.1e-72 279.3 888 35.7
Oeu029877.3 Olea europaea HOM05D002002 ORTHO05D008797 1.5e-72 278.9 803 37.6
PSO478G2109 Papaver somniferum HOM05D002002 ORTHO05D008797 1.9e-72 278.5 903 33.3
DCAR_007056 Daucus carota HOM05D002002 ORTHO05D008797 2.1e-71 275.0 824 36.0
HanXRQChr08g0208141 Helianthus annuus HOM05D002002 ORTHO05D008797 3.5e-66 257.7 896 36.3
Rhsim12G0110400 Rhododendron simsii HOM05D002002 ORTHO05D008797 6.7e-65 253.4 728 39.3
SGA_v2.0_scaffold476G52131 Striga asiatica HOM05D002002 ORTHO05D008797 1.3e-63 249.2 911 36.7
Aa31LG4G10340 Aethionema arabicum HOM05D002002 ORTHO05D008711 9.0e-62 243.0 967 32.6
ATR0824G114 Amborella trichopoda HOM05D002002 ORTHO05D008797 1.5e-61 242.3 797 34.0
Lsat_1_v5_gn_8_152141 Lactuca sativa HOM05D002002 ORTHO05D008711 4.2e-59 234.2 941 32.6
Os04g0661700 Oryza sativa ssp. japonica HOM05D002002 ORTHO05D008797 2.5e-56 224.9 895 32.0
AL2G30050 Arabidopsis lyrata HOM05D002002 ORTHO05D008797 3.3e-56 224.6 832 31.5
Sp5g25780 Schrenkiella parvula HOM05D002002 ORTHO05D008797 4.8e-55 220.7 1021 29.9
Cc11_g15720 Coffea canephora HOM05D002002 ORTHO05D008797 6.2e-55 220.3 898 31.7
unitig_26.g10348 Utricularia gibba HOM05D002002 ORTHO05D008797 4.2e-51 207.6 926 31.7
HPP92_005414 Vanilla planifolia HOM05D002002 ORTHO05D008797 4.3e-48 197.6 973 31.2
SEGI_21221 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 2.8e-47 194.9 950 33.5
TPR.G2569 Trifolium pratense HOM05D002002 ORTHO05D008797 7.6e-45 186.8 141 70.2
CARHR063850 Cardamine hirsuta HOM05D002002 ORTHO05D008797 5.0e-44 184.1 945 30.3
A02p16740 Brassica napus HOM05D002002 ORTHO05D008797 8.5e-44 183.3 1003 27.9
BraA02t06728Z Brassica rapa HOM05D002002 ORTHO05D008797 1.4e-43 182.6 1025 28.1
SGA_v2.0_scaffold98G29360 Striga asiatica HOM05D002002 ORTHO05D008797 5.1e-41 174.1 481 38.0
AT1G70620 Arabidopsis thaliana HOM05D002002 ORTHO05D008797 6.7e-41 173.7 551 32.8
Thhalv10018098m.g Eutrema salsugineum HOM05D002002 ORTHO05D008797 1.5e-40 172.6 903 29.1
Sed0026296 Sechium edule HOM05D002002 ORTHO05D008797 3.8e-36 157.9 464 34.3
SEGI_37990 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 2.5e-35 155.2 937 32.8
Lj6A812T43 Lonicera japonica HOM05D002002 ORTHO05D008797 5.5e-35 154.1 352 37.2
VMungo0647G2210 Vigna mungo HOM05D019972 ORTHO05D021033 3.6e-34 151.4 167 55.1
CDE07G1782 Ceratophyllum demersum HOM05D002002 ORTHO05D008797 7.9e-34 150.2 909 28.1
Carub.0002s1735 Capsella rubella HOM05D002002 ORTHO05D008797 1.8e-33 149.1 688 28.9
BcaB05g24599 Brassica carinata HOM05D002002 ORTHO05D008797 8.8e-33 146.7 900 26.3
TPR.G1066 Trifolium pratense HOM05D002002 ORTHO05D008797 1.1e-32 146.4 116 69.0
BcaC03g15213 Brassica carinata HOM05D002002 ORTHO05D008797 1.5e-32 146.0 885 27.2
C02p28000 Brassica napus HOM05D002002 ORTHO05D008797 1.8e-30 139.0 811 27.4
BolC2t08843H Brassica oleracea HOM05D002002 ORTHO05D008797 6.9e-30 137.1 968 26.2
VMungo1127G1886 Vigna mungo HOM05D019972 ORTHO05D021033 2.2e-28 132.1 163 52.8
TPR.G3088 Trifolium pratense HOM05D001978 ORTHO05D010457 4.7e-26 124.4 174 57.5
Zm00001eb067460 Zea mays HOM05D002002 ORTHO05D008797 1.5e-24 119.4 581 30.5
GSVIVG01005755001 Vitis vinifera HOM05D002002 ORTHO05D008797 5.3e-22 110.9 97 70.1
TPR.G3084 Trifolium pratense HOM05D002002 ORTHO05D012248 2.9e-20 105.1 123 56.1
Solyc05g013490.4 Solanum lycopersicum HOM05D002002 ORTHO05D008797 5.5e-19 100.9 249 36.9
Pp3c22_14720 Physcomitrium patens HOM05D002002 ORTHO05D008797 6.3e-15 87.4 632 27.4
unitig_26.g10410 Utricularia gibba HOM05D002002 ORTHO05D008797 1.2e-13 83.2 178 40.4
Mapoly0026s0020 Marchantia polymorpha HOM05D002002 ORTHO05D008797 1.6e-13 82.8 270 34.1
TPR.G24664 Trifolium pratense HOM05D002002 ORTHO05D008797 5.0e-12 77.8 74 60.8
VMungo1215G3114 Vigna mungo HOM05D019972 ORTHO05D021033 1.8e-09 69.3 102 47.1
Lj6P812T17 Lonicera japonica HOM05D002002 ORTHO05D008797 2.0e-08 65.9 155 36.8
TPR.G3894 Trifolium pratense HOM05D002002 ORTHO05D008797 1.8e-06 59.3 89 53.9


User provided reference genes

Program Settings