Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0391651 Lupinus albus HOM05D000874 ORTHO05D001267 8.9e-205 716.8 398 100.0
Lalb_Chr05g0229601 Lupinus albus HOM05D000874 ORTHO05D001267 1.2e-84 317.8 426 53.1
Glyma.06G204600 Glycine max HOM05D000874 ORTHO05D001267 3.0e-59 233.4 386 42.7
Glyma.04G160800 Glycine max HOM05D000874 ORTHO05D001267 5.6e-58 229.2 275 54.2
VMungo1309G3138 Vigna mungo HOM05D000874 ORTHO05D001267 2.0e-55 220.7 284 50.4
Phvul.009G202700 Phaseolus vulgaris HOM05D000874 ORTHO05D001267 3.8e-54 216.5 315 46.0
Psat4g051080 Pisum sativum HOM05D000874 ORTHO05D001267 4.9e-54 216.1 309 48.9
Lj1g0025338 Lotus japonicus HOM05D000874 ORTHO05D001267 8.4e-54 215.3 367 45.2
Medtr2g060650 Medicago truncatula HOM05D000874 ORTHO05D001267 3.7e-49 199.9 281 52.7
Ca_02921_v3 Cicer arietinum L. HOM05D000874 ORTHO05D001267 5.5e-37 159.5 263 51.3
arahy.Tifrunner.gnm1.ann1.A58RJ7 Arachis hypogaea HOM05D000874 ORTHO05D001267 1.0e-30 138.7 320 42.8
arahy.Tifrunner.gnm1.ann1.GR9NQC Arachis hypogaea HOM05D000874 ORTHO05D001267 1.0e-30 138.7 328 43.0
Medtr2g061440 Medicago truncatula HOM05D002527 ORTHO05D001267 4.5e-23 113.2 107 55.1
Dinv17430 Davidia involucrata HOM05D000874 ORTHO05D001267 2.7e-20 104.0 272 39.7
TAR371G0581 Trochodendron aralioides HOM05D000874 ORTHO05D003941 4.7e-20 103.2 292 30.5
Atru.chr9.525 Acer truncatum HOM05D000874 ORTHO05D001267 5.2e-19 99.8 291 37.8
ClCG06G015550 Citrullus lanatus HOM05D000874 ORTHO05D001267 3.3e-18 97.1 323 33.4
Haze_07744 Corylus avellana HOM05D000874 ORTHO05D001267 2.8e-17 94.0 293 38.2
CiPaw.11G055300 Carya illinoinensis HOM05D000874 ORTHO05D001267 1.1e-16 92.0 271 38.7
Manes.14G086800 Manihot esculenta HOM05D000874 ORTHO05D001267 1.6e-15 88.2 316 35.4
TWI60G1583 Tripterygium wilfordii HOM05D000874 ORTHO05D001267 1.6e-15 88.2 291 34.0
Manes.06G083000 Manihot esculenta HOM05D000874 ORTHO05D001267 3.5e-15 87.0 297 37.4
GSVIVG01008114001 Vitis vinifera HOM05D000874 ORTHO05D001267 4.5e-15 86.7 188 36.2
Thecc.03G104300 Theobroma cacao HOM05D000874 ORTHO05D001267 1.0e-14 85.5 220 32.7
QL10p019931 Quercus lobata HOM05D000874 ORTHO05D001267 1.3e-14 85.1 305 35.1
Nn4g23458 Nelumbo nucifera HOM05D000874 ORTHO05D001267 6.5e-14 82.8 303 34.0
Lj5A134T72 Lonicera japonica HOM05D000874 ORTHO05D001267 8.5e-14 82.4 136 50.0
MELO3C017235.2 Cucumis melo HOM05D000874 ORTHO05D001267 1.6e-12 78.2 327 31.8
Prupe.5G206700 Prunus persica HOM05D000874 ORTHO05D001267 2.1e-12 77.8 259 34.0
Sed0005310 Sechium edule HOM05D000874 ORTHO05D001267 4.0e-11 73.6 300 32.3
CsaV3_1G003050 Cucumis sativus L. HOM05D000874 ORTHO05D001267 5.2e-11 73.2 311 31.8
Gohir.D03G097100 Gossypium hirsutum HOM05D000874 ORTHO05D001267 1.2e-10 72.0 189 32.3
Oeu017180.1 Olea europaea HOM05D000874 ORTHO05D001267 1.5e-10 71.6 317 31.9
FAN13G1125 Fragaria x ananassa HOM05D000874 ORTHO05D001049 3.4e-10 70.5 193 40.4
Rhsim08G0144400 Rhododendron simsii HOM05D000874 ORTHO05D001267 4.4e-10 70.1 183 42.6
SalBow5G5238 Salvia bowleyana HOM05D000874 ORTHO05D001267 4.4e-10 70.1 136 42.6
Gohir.A03G070700 Gossypium hirsutum HOM05D000874 ORTHO05D001267 5.7e-10 69.7 189 31.7
Gorai.003G101900 Gossypium raimondii HOM05D000874 ORTHO05D001267 5.7e-10 69.7 189 31.7
Ciclev10018493m.g Citrus clementina HOM05D000874 ORTHO05D001267 7.5e-10 69.3 250 36.4
Duzib068G0415 Durio zibethinus HOM05D000874 ORTHO05D003941 9.8e-10 68.9 202 31.2
vmacro16489 Vaccinium macrocarpon HOM05D000874 ORTHO05D001267 9.8e-10 68.9 158 51.9
CSS0023333 Camellia sinensis var. sinensis HOM05D000874 ORTHO05D001267 1.7e-09 68.2 235 37.4
FvH4_5g13670 Fragaria vesca HOM05D000874 ORTHO05D001267 1.7e-09 68.2 286 32.5
Actinidia04813 Actinidia chinensis HOM05D000874 ORTHO05D001267 2.2e-09 67.8 276 35.1
Cpa.g.sc94.72 Carica papaya HOM05D000874 ORTHO05D001267 3.7e-09 67.0 209 34.4
Hma1.2p1_0060F.1_g032960 Hydrangea macrophylla HOM05D000874 ORTHO05D001267 3.7e-09 67.0 321 34.0
Cc00_g03520 Coffea canephora HOM05D000874 ORTHO05D001267 4.8e-09 66.6 366 31.7
TWI60G0797 Tripterygium wilfordii HOM05D000874 ORTHO05D001267 6.3e-09 66.2 186 31.2
unitig_26.g9669 Utricularia gibba HOM05D000874 ORTHO05D001267 8.3e-09 65.9 144 33.3
FAN08G0155 Fragaria x ananassa HOM05D000874 ORTHO05D001267 1.1e-08 65.5 286 32.9
FAN18G0264 Fragaria x ananassa HOM05D000874 ORTHO05D001267 1.8e-08 64.7 284 32.0
CSS0039968 Camellia sinensis var. sinensis HOM05D000874 ORTHO05D001267 5.4e-08 63.2 235 37.9
RcHm_v2.0_Chr7g0183291 Rosa chinensis HOM05D000874 ORTHO05D001267 9.1e-08 62.4 302 31.8
Eucgr.B00614 Eucalyptus grandis HOM05D000874 ORTHO05D001267 1.2e-07 62.0 263 31.2
EL10Ac5g11157 Beta vulgaris HOM05D000874 ORTHO05D001267 1.6e-07 61.6 205 40.5
AUR62039650 Chenopodium quinoa HOM05D000874 ORTHO05D001267 1.6e-07 61.6 324 29.9
PGR083G2399 Punica granatum HOM05D000874 ORTHO05D001267 2.7e-07 60.8 289 24.9
DCAR_023163 Daucus carota HOM05D000874 ORTHO05D001267 3.5e-07 60.5 291 33.3
Solyc06g069440.3 Solanum lycopersicum HOM05D000874 ORTHO05D001267 4.5e-07 60.1 212 33.0
MSTRG.22953 Avicennia marina HOM05D000874 ORTHO05D001267 1.0e-06 58.9 136 41.2
CANSAT80G1925 Cannabis sativa HOM05D000874 ORTHO05D001267 1.7e-06 58.2 263 32.3
SGA_v2.0_scaffold28G11741 Striga asiatica HOM05D000874 ORTHO05D001267 1.7e-06 58.2 94 43.6
MD14G1213100 Malus domestica HOM05D000874 ORTHO05D001267 2.2e-06 57.8 198 38.9
Nitab4.5_0007645g0020 Nicotiana tabacum HOM05D000874 ORTHO05D001267 2.9e-06 57.4 121 34.7


User provided reference genes

Program Settings