Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0391581 Lupinus albus HOM05D007336 ORTHO05D009339 1.7e-64 249.2 126 100.0
Glyma.19G230700 Glycine max HOM05D007336 ORTHO05D009339 1.6e-54 216.1 125 83.2
Lj1g0024848 Lotus japonicus HOM05D007336 ORTHO05D009339 2.9e-53 211.8 126 80.2
Psat0s3672g0040 Pisum sativum HOM05D007336 ORTHO05D009339 2.5e-52 208.8 126 79.4
Phvul.001G227200 Phaseolus vulgaris HOM05D007336 ORTHO05D009339 7.3e-52 207.2 126 81.7
arahy.Tifrunner.gnm1.ann1.N7WCQ3 Arachis hypogaea HOM05D000001 ORTHO05D010781 1.8e-50 202.6 125 81.6
Medtr7g112530 Medicago truncatula HOM05D007336 ORTHO05D009339 1.8e-50 202.6 126 77.8
arahy.Tifrunner.gnm1.ann1.63GRQU Arachis hypogaea HOM05D007336 ORTHO05D010781 1.5e-49 199.5 125 80.0
MD04G1197300 Malus domestica HOM05D007336 ORTHO05D009339 1.5e-49 199.5 126 77.0
MD12G1210100 Malus domestica HOM05D007336 ORTHO05D009339 3.4e-49 198.4 126 77.0
Prupe.6G317700 Prunus persica HOM05D007336 ORTHO05D009339 6.4e-48 194.1 120 78.3
TPR.G39916 Trifolium pratense HOM05D007336 ORTHO05D009339 1.9e-47 192.6 126 74.6
GSVIVG01031156001 Vitis vinifera HOM05D007336 ORTHO05D009339 3.9e-45 184.9 121 69.4
Cfa006663 Carpinus fangiana HOM05D007336 ORTHO05D009339 5.0e-45 184.5 121 71.9
Atru.chr1.2192 Acer truncatum HOM05D007336 ORTHO05D009339 6.6e-45 184.1 124 71.0
Manes.01G127100 Manihot esculenta HOM05D007336 ORTHO05D009339 6.6e-45 184.1 123 70.7
RcHm_v2.0_Chr3g0456501 Rosa chinensis HOM05D007336 ORTHO05D009339 2.5e-44 182.2 122 72.1
Atru.chr1.2191 Acer truncatum HOM05D007336 ORTHO05D009339 5.6e-44 181.0 124 70.2
FvH4_6g06960 Fragaria vesca HOM05D007336 ORTHO05D009339 9.5e-44 180.3 122 71.3
Potri.005G021800 Populus trichocarpa HOM05D007336 ORTHO05D009339 1.6e-43 179.5 121 68.6
FAN05G1709 Fragaria x ananassa HOM05D007336 ORTHO05D009339 2.1e-43 179.1 122 70.5
FAN05G3591 Fragaria x ananassa HOM05D007336 ORTHO05D009339 2.1e-43 179.1 122 70.5
TAR362G0973 Trochodendron aralioides HOM05D007336 ORTHO05D009339 2.8e-43 178.7 125 66.4
CiPaw.08G158700 Carya illinoinensis HOM05D007336 ORTHO05D009339 1.1e-42 176.8 123 68.3
FAN09G1805 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.1e-42 176.8 122 70.5
FAN14G5314 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.1e-42 176.8 122 70.5
Aqoxy2G02873 Aquilegia oxysepala HOM05D007336 ORTHO05D009339 3.1e-42 175.3 122 68.9
COL.COLO4_03798 Corchorus olitorius HOM05D007336 ORTHO05D009339 5.2e-42 174.5 126 67.5
Duzib128G0390 Durio zibethinus HOM05D007336 ORTHO05D009339 5.2e-42 174.5 126 65.9
Ciclev10002848m.g Citrus clementina HOM05D007336 ORTHO05D009339 6.8e-42 174.1 126 65.9
FAN02G4454 Fragaria x ananassa HOM05D007336 ORTHO05D009339 2.0e-41 172.6 132 66.7
CANSAT54G2288 Cannabis sativa HOM05D007336 ORTHO05D009339 5.8e-41 171.0 119 68.9
MELO3C004210.2 Cucumis melo HOM05D007336 ORTHO05D009339 5.8e-41 171.0 122 68.9
Gorai.007G303000 Gossypium raimondii HOM05D007336 ORTHO05D009339 7.5e-41 170.6 126 65.9
Thecc.05G317300 Theobroma cacao HOM05D007336 ORTHO05D009339 7.5e-41 170.6 126 65.9
Haze_04108 Corylus avellana HOM05D002548 ORTHO05D003031 1.3e-40 169.9 159 56.6
CsaV3_2G006800 Cucumis sativus L. HOM05D007336 ORTHO05D009339 1.3e-40 169.9 122 68.0
THA.LOC104805904 Tarenaya hassleriana HOM05D007336 ORTHO05D009339 1.3e-40 169.9 112 71.4
Gohir.D11G280800 Gossypium hirsutum HOM05D007336 ORTHO05D009339 1.7e-40 169.5 126 65.9
ClCG02G015210 Citrullus lanatus HOM05D007336 ORTHO05D009339 4.9e-40 167.9 122 68.9
PGR031G1948 Punica granatum HOM05D007336 ORTHO05D009339 8.3e-40 167.2 118 67.8
Migut.G00122 Erythranthe guttata HOM05D007336 ORTHO05D009339 4.1e-39 164.9 126 62.7
Actinidia40305 Actinidia chinensis HOM05D007336 ORTHO05D009339 9.2e-39 163.7 123 64.2
Eucgr.H03266 Eucalyptus grandis HOM05D007336 ORTHO05D009339 9.2e-39 163.7 121 65.3
MSTRG.3884 Avicennia marina HOM05D007336 ORTHO05D009339 1.2e-38 163.3 116 69.0
Rhsim04G0227800 Rhododendron simsii HOM05D007336 ORTHO05D009339 4.6e-38 161.4 126 61.9
BcaB04g20156 Brassica carinata HOM05D007336 ORTHO05D009339 6.0e-38 161.0 115 65.2
Eucgr.H03264 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.0e-37 160.2 121 64.5
vmacro08103 Vaccinium macrocarpon HOM05D007336 ORTHO05D009339 3.0e-37 158.7 126 61.9
Aa31LG2G11600 Aethionema arabicum HOM05D007336 ORTHO05D009339 3.9e-37 158.3 115 64.3
CSS0001044 Camellia sinensis var. sinensis HOM05D007336 ORTHO05D009339 5.1e-37 157.9 124 62.1
SalBow2G0618 Salvia bowleyana HOM05D007336 ORTHO05D009339 5.1e-37 157.9 126 61.1
Cc03_g01420 Coffea canephora HOM05D007336 ORTHO05D009339 6.6e-37 157.5 126 59.5
Dinv29713 Davidia involucrata HOM05D002548 ORTHO05D003031 1.1e-36 156.8 120 65.0
A01p27330 Brassica napus HOM05D007336 ORTHO05D009339 1.5e-36 156.4 115 63.5
C01p35170 Brassica napus HOM05D007336 ORTHO05D009339 1.5e-36 156.4 115 63.5
BolC1t03475H Brassica oleracea HOM05D007336 ORTHO05D009339 1.5e-36 156.4 115 63.5
BraA01t02872Z Brassica rapa HOM05D007336 ORTHO05D009339 1.5e-36 156.4 115 63.5
Lsat_1_v5_gn_6_76001 Lactuca sativa HOM05D007336 ORTHO05D009339 1.5e-36 156.4 124 65.3
Thhalv10023757m.g Eutrema salsugineum HOM05D007336 ORTHO05D009339 5.6e-36 154.5 115 60.9
Dinv44340 Davidia involucrata HOM05D007336 ORTHO05D009339 7.3e-36 154.1 122 63.1
CDE02G0601 Ceratophyllum demersum HOM05D007336 ORTHO05D009339 9.5e-36 153.7 115 62.6
Sp2g06650 Schrenkiella parvula HOM05D007336 ORTHO05D009339 1.6e-35 152.9 115 61.7
VMungo1383G0834 Vigna mungo HOM05D007336 ORTHO05D009339 2.8e-35 152.1 91 80.2
HPP92_013733 Vanilla planifolia HOM05D007336 ORTHO05D009339 6.2e-35 151.0 113 61.1
AL1G65880 Arabidopsis lyrata HOM05D007336 ORTHO05D009339 2.3e-34 149.1 123 56.9
Nitab4.5_0000306g0320 Nicotiana tabacum HOM05D007336 ORTHO05D009339 6.8e-34 147.5 117 60.7
BcaC09g49567 Brassica carinata HOM05D007336 ORTHO05D009339 1.2e-33 146.7 115 61.7
AUR62015269 Chenopodium quinoa HOM05D007336 ORTHO05D009339 1.2e-33 146.7 122 58.2
MBI18_g25083_MAGBIO Magnolia biondii HOM05D007336 ORTHO05D009339 1.2e-33 146.7 154 51.9
AUR62018066 Chenopodium quinoa HOM05D007336 ORTHO05D009339 1.5e-33 146.4 122 58.2
Peaxi162Scf00065g01021 Petunia axillaris HOM05D007336 ORTHO05D009339 2.6e-33 145.6 116 60.3
SGA_v2.0_scaffold104G30104 Striga asiatica HOM05D007336 ORTHO05D009339 4.4e-33 144.8 126 57.1
Prupe.2G221300 Prunus persica HOM05D007336 ORTHO05D009339 5.8e-33 144.4 95 71.6
AT1G56260 Arabidopsis thaliana HOM05D007336 ORTHO05D009339 7.6e-33 144.1 124 55.6
CARHR289820 Cardamine hirsuta HOM05D007336 ORTHO05D009339 1.3e-32 143.3 115 56.5
DCAR_030493 Daucus carota HOM05D007336 ORTHO05D009339 1.3e-32 143.3 124 58.9
Carub.0002s0790 Capsella rubella HOM05D007336 ORTHO05D009339 1.7e-32 142.9 124 54.8
SEGI_32823 Sequoiadendron giganteum HOM05D007336 ORTHO05D009339 2.2e-32 142.5 119 54.6
PGSC0003DMG400006241 Solanum tuberosum HOM05D007336 ORTHO05D009339 2.9e-32 142.1 112 59.8
Sc19g0005520 Simmondsia chinensis HOM05D007336 ORTHO05D009339 4.9e-32 141.4 115 60.9
EL10Ac3g06656 Beta vulgaris HOM05D007336 ORTHO05D009339 6.4e-32 141.0 122 54.9
CAN.G14.12 Capsicum annuum HOM05D007336 ORTHO05D009339 8.4e-32 140.6 112 58.9
Zm00001eb300400 Zea mays HOM05D007336 ORTHO05D009339 1.9e-31 139.4 122 55.7
Hund20531 Selenicereus undatus HOM05D007336 ORTHO05D009339 2.4e-31 139.0 116 57.8
unitig_46.g18696 Utricularia gibba HOM05D007336 ORTHO05D009339 3.2e-31 138.7 109 64.2
QL03p019121 Quercus lobata HOM05D007336 ORTHO05D009339 5.4e-31 137.9 224 37.9
Nitab4.5_0002755g0010 Nicotiana tabacum HOM05D007336 ORTHO05D009339 9.2e-31 137.1 134 52.2
Gohir.A11G270600 Gossypium hirsutum HOM05D007336 ORTHO05D009339 2.1e-30 136.0 107 64.5
PSO832G0037 Papaver somniferum HOM05D007336 ORTHO05D009339 1.3e-29 133.3 121 53.7
Solyc01g065710.3 Solanum lycopersicum HOM05D007336 ORTHO05D009339 2.3e-29 132.5 112 57.1
Sopen01g027110 Solanum pennellii HOM05D007336 ORTHO05D009339 2.3e-29 132.5 112 57.1
Glyma.03G233600 Glycine max HOM05D007336 ORTHO05D009339 6.6e-29 131.0 82 75.6
Sed0016582 Sechium edule HOM05D007336 ORTHO05D009339 7.3e-28 127.5 90 67.8
Cpa.g.sc48.123 Carica papaya HOM05D007336 ORTHO05D009339 9.6e-28 127.1 195 40.0
Prupe.3G209800 Prunus persica HOM05D007336 ORTHO05D009339 1.8e-26 122.9 114 57.9
AagrBONN_evm.TU.Sc2ySwM_344.3688 Anthoceros agrestis HOM05D007336 ORTHO05D009339 1.5e-25 119.8 111 50.5
ATR0693G059 Amborella trichopoda HOM05D007336 ORTHO05D009339 2.0e-25 119.4 92 57.6
Eucgr.H03263 Eucalyptus grandis HOM05D007336 ORTHO05D009339 2.6e-25 119.0 92 59.8
HanXRQChr13g0413951 Helianthus annuus HOM05D007336 ORTHO05D009339 3.4e-25 118.6 91 63.7
Eucgr.H03265 Eucalyptus grandis HOM05D007336 ORTHO05D009339 7.6e-25 117.5 92 59.8
Eucgr.L02901 Eucalyptus grandis HOM05D007336 ORTHO05D009339 7.6e-25 117.5 92 59.8
Nn4g25729 Nelumbo nucifera HOM05D007336 ORTHO05D009339 1.3e-24 116.7 86 64.0
Pp3c22_13440 Physcomitrium patens HOM05D007336 ORTHO05D009339 7.1e-23 110.9 122 42.6
Ah.04g153680 Amaranthus hybridus HOM05D007336 ORTHO05D009339 2.7e-22 109.0 94 57.4
Oeu031988.1 Olea europaea HOM05D007336 ORTHO05D009339 3.3e-20 102.1 86 57.0
SMO137G0008 Selaginella moellendorffii HOM05D007336 ORTHO05D009339 3.4e-17 92.0 111 45.9
Mapoly0064s0018 Marchantia polymorpha HOM05D007336 ORTHO05D009339 5.6e-12 74.7 79 44.3


User provided reference genes

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