Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 8.5e-51 203.4 102 100.0
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 1.7e-46 189.1 102 88.2
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 8.2e-46 186.8 103 88.3
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 8.2e-46 186.8 102 86.3
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 1.4e-45 186.0 103 87.4
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 9.1e-45 183.3 102 85.3
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 1.6e-44 182.6 103 85.4
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 4.5e-44 181.0 102 86.3
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 5.9e-44 180.6 102 82.4
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 5.9e-44 180.6 102 82.4
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 4.7e-41 171.0 107 76.6
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 1.8e-40 169.1 107 74.8
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 3.0e-40 168.3 107 75.7
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 5.2e-40 167.5 101 77.2
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 5.2e-40 167.5 101 77.2
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 5.2e-40 167.5 101 77.2
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 8.8e-40 166.8 102 76.5
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 1.2e-39 166.4 102 76.5
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 2.6e-39 165.2 101 76.2
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 7.5e-39 163.7 101 76.2
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 9.7e-39 163.3 102 75.5
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 9.7e-39 163.3 108 74.1
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 2.8e-38 161.8 101 72.3
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 3.7e-38 161.4 101 75.2
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 3.7e-38 161.4 101 74.3
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 1.4e-37 159.5 102 72.5
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 1.4e-37 159.5 101 72.3
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 2.4e-37 158.7 96 75.0
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 3.1e-37 158.3 107 68.2
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 3.1e-37 158.3 105 71.4
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 4.1e-37 157.9 101 72.3
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 1.6e-36 156.0 95 73.7
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 2.0e-36 155.6 104 71.2
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 2.7e-36 155.2 100 72.0
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 3.5e-36 154.8 101 72.3
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 4.5e-36 154.5 100 73.0
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 7.7e-36 153.7 108 67.6
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 8.5e-35 150.2 107 67.3
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 1.1e-34 149.8 100 70.0
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 1.1e-34 149.8 108 65.7
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 1.1e-34 149.8 108 65.7
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 1.1e-34 149.8 107 69.2
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 1.1e-34 149.8 81 87.7
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 1.9e-34 149.1 93 75.3
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 2.5e-34 148.7 96 69.8
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 2.5e-34 148.7 93 72.0
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 2.5e-34 148.7 96 70.8
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 3.2e-34 148.3 102 68.6
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 3.2e-34 148.3 96 71.9
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 3.2e-34 148.3 96 69.8
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 4.2e-34 147.9 96 69.8
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 4.2e-34 147.9 101 67.3
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 5.5e-34 147.5 93 71.0
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 5.5e-34 147.5 96 71.9
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 5.5e-34 147.5 103 68.0
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 7.2e-34 147.1 110 65.5
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 9.4e-34 146.7 96 68.8
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 9.4e-34 146.7 96 68.8
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 9.4e-34 146.7 96 68.8
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 9.4e-34 146.7 96 69.8
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 1.2e-33 146.4 95 69.5
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 1.2e-33 146.4 96 68.8
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 1.2e-33 146.4 96 68.8
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 1.6e-33 146.0 96 68.8
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 2.1e-33 145.6 95 68.4
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 2.7e-33 145.2 95 68.4
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 2.7e-33 145.2 96 70.8
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 6.1e-33 144.1 80 85.0
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 8.0e-33 143.7 103 67.0
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 2.3e-32 142.1 93 72.0
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 2.3e-32 142.1 92 68.5
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 4.0e-32 141.4 95 67.4
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 4.0e-32 141.4 96 71.9
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 4.0e-32 141.4 103 67.0
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 5.2e-32 141.0 103 68.0
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 5.2e-32 141.0 103 68.0
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 6.8e-32 140.6 92 67.4
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 8.8e-32 140.2 96 66.7
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 8.8e-32 140.2 137 54.0
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 1.5e-31 139.4 80 83.8
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 2.6e-31 138.7 103 67.0
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 2.6e-31 138.7 103 66.0
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 4.4e-31 137.9 105 61.9
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 5.7e-31 137.5 96 66.7
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 7.5e-31 137.1 95 65.3
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 1.3e-30 136.3 145 49.7
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 1.3e-30 136.3 95 68.4
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 1.3e-30 136.3 93 71.0
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 2.8e-30 135.2 90 67.8
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 4.8e-30 134.4 98 63.3
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 1.4e-29 132.9 92 65.2
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 1.4e-29 132.9 86 76.7
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 4.1e-29 131.3 80 77.5
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 4.1e-29 131.3 96 63.5
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 9.1e-29 130.2 80 73.8
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 4.5e-28 127.9 88 69.3
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 1.7e-27 125.9 97 62.9
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 1.5e-26 122.9 94 64.9
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 3.3e-26 121.7 86 66.3
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 4.2e-26 121.3 91 62.6
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 5.5e-26 120.9 88 62.5
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 2.6e-23 112.1 95 55.8
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 6.3e-22 107.5 87 63.2
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 1.1e-21 106.7 80 63.8
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 1.1e-21 106.7 82 62.2
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 2.4e-21 105.5 87 55.2
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 1.6e-20 102.8 77 63.6
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 5.9e-20 100.9 71 69.0
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 6.1e-17 90.9 72 58.3
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 1.8e-16 89.4 53 71.7
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 4.0e-16 88.2 56 69.6
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 1.3e-14 83.2 50 70.0
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 4.6e-12 74.7 53 71.7
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 1.7e-11 72.8 52 65.4
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 7.3e-10 67.4 53 64.2
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 6.2e-09 64.3 50 58.0


User provided reference genes

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