Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0390631 Lupinus albus HOM05D007275 ORTHO05D009279 2.1e-42 175.3 87 100.0
Nitab4.5_0000726g0090 Nicotiana tabacum HOM05D007275 ORTHO05D009279 2.2e-15 85.5 50 78.0
QL02p030913 Quercus lobata HOM05D007275 ORTHO05D009279 2.2e-15 85.5 50 76.0
Cfa012796 Carpinus fangiana HOM05D007275 ORTHO05D009279 2.9e-15 85.1 50 78.0
Hma1.2p1_0229F.1_g097175 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 3.8e-15 84.7 50 78.0
Hma1.2p1_0229F.1_g097200 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 3.8e-15 84.7 50 78.0
Ciclev10024283m.g Citrus clementina HOM05D007275 ORTHO05D009279 6.4e-15 84.0 50 78.0
Hma1.2p1_0359F.1_g135280 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 8.4e-15 83.6 50 78.0
Nitab4.5_0007661g0010 Nicotiana tabacum HOM05D007275 ORTHO05D009279 8.4e-15 83.6 52 75.0
Phvul.002G297500 Phaseolus vulgaris HOM05D007275 ORTHO05D009279 8.4e-15 83.6 50 78.0
Atru.chr9.2015 Acer truncatum HOM05D007275 ORTHO05D009279 1.4e-14 82.8 50 78.0
arahy.Tifrunner.gnm1.ann1.GQP3LI Arachis hypogaea HOM05D007275 ORTHO05D009279 1.4e-14 82.8 50 74.0
Cc08_g15930 Coffea canephora HOM05D007275 ORTHO05D009279 1.4e-14 82.8 51 74.5
Peaxi162Scf00074g01033 Petunia axillaris HOM05D007275 ORTHO05D009279 1.4e-14 82.8 50 72.0
Prupe.5G117300 Prunus persica HOM05D007275 ORTHO05D009279 1.4e-14 82.8 50 76.0
Nitab4.5_0010144g0020 Nicotiana tabacum HOM05D007275 ORTHO05D009279 1.9e-14 82.4 50 72.0
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 2.4e-14 82.0 60 63.3
Haze_08628 Corylus avellana HOM05D007275 ORTHO05D009279 2.4e-14 82.0 50 74.0
Dinv37542 Davidia involucrata HOM05D007275 ORTHO05D009279 2.4e-14 82.0 50 76.0
Lj4g0015273 Lotus japonicus HOM05D007275 ORTHO05D009279 3.2e-14 81.6 65 61.5
AUR62010827 Chenopodium quinoa HOM05D007275 ORTHO05D009279 4.2e-14 81.3 50 72.0
Hma1.2p1_2596F.1_g325120 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 4.2e-14 81.3 49 77.6
arahy.Tifrunner.gnm1.ann1.IALD8X Arachis hypogaea HOM05D007275 ORTHO05D009279 5.4e-14 80.9 50 72.0
Dinv38844 Davidia involucrata HOM05D007275 ORTHO05D009279 5.4e-14 80.9 50 74.0
Glyma.05G216300 Glycine max HOM05D007275 ORTHO05D009279 5.4e-14 80.9 50 74.0
Sabra03G0100000 Salix brachista HOM05D007275 ORTHO05D009279 5.4e-14 80.9 50 72.0
Potri.003G138800 Populus trichocarpa HOM05D007275 ORTHO05D009279 7.1e-14 80.5 50 72.0
Gohir.A12G235700 Gossypium hirsutum HOM05D007275 ORTHO05D009279 9.2e-14 80.1 50 70.0
Gohir.D12G236900 Gossypium hirsutum HOM05D007275 ORTHO05D009279 9.2e-14 80.1 50 70.0
Gorai.008G253500 Gossypium raimondii HOM05D007275 ORTHO05D009279 9.2e-14 80.1 50 70.0
Nitab4.5_0000223g0330 Nicotiana tabacum HOM05D007275 ORTHO05D009279 9.2e-14 80.1 50 70.0
Potri.001G092700 Populus trichocarpa HOM05D007275 ORTHO05D009279 9.2e-14 80.1 50 72.0
Actinidia22145 Actinidia chinensis HOM05D007275 ORTHO05D009279 1.2e-13 79.7 50 74.0
Manes.02G011100 Manihot esculenta HOM05D007275 ORTHO05D009279 1.2e-13 79.7 50 72.0
Sabra01G0069000 Salix brachista HOM05D007275 ORTHO05D009279 1.2e-13 79.7 50 70.0
AUR62019826 Chenopodium quinoa HOM05D007275 ORTHO05D009279 1.6e-13 79.3 50 72.0
Lalb_Chr16g0390621 Lupinus albus HOM05D007275 ORTHO05D009279 1.6e-13 79.3 50 70.0
MD06G1104700 Malus domestica HOM05D007275 ORTHO05D009279 2.1e-13 79.0 50 70.0
Peaxi162Scf00117g01123 Petunia axillaris HOM05D007275 ORTHO05D009279 2.1e-13 79.0 50 74.0
GSVIVG01019513001 Vitis vinifera HOM05D007275 ORTHO05D009279 2.7e-13 78.6 50 70.0
CSS0010422 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 3.5e-13 78.2 50 72.0
Glyma.08G022200 Glycine max HOM05D007275 ORTHO05D009279 3.5e-13 78.2 50 70.0
Oeu038573.1 Olea europaea HOM05D007275 ORTHO05D009279 3.5e-13 78.2 50 70.0
MD14G1123400 Malus domestica HOM05D007275 ORTHO05D009279 4.6e-13 77.8 50 70.0
Medtr8g099385 Medicago truncatula HOM05D007275 ORTHO05D009279 6.0e-13 77.4 66 59.1
Sc01g0010220 Simmondsia chinensis HOM05D007275 ORTHO05D009279 6.0e-13 77.4 50 72.0
CAN.G532.107 Capsicum annuum HOM05D007275 ORTHO05D009279 1.0e-12 76.6 50 66.0
Nn1g01839 Nelumbo nucifera HOM05D007275 ORTHO05D009279 1.0e-12 76.6 50 68.0
Thecc.03G296000 Theobroma cacao HOM05D007275 ORTHO05D009279 1.0e-12 76.6 50 68.0
EL10Ac5g12903 Beta vulgaris HOM05D007275 ORTHO05D009279 1.3e-12 76.3 50 64.0
DCAR_005035 Daucus carota HOM05D007275 ORTHO05D009279 1.3e-12 76.3 50 70.0
CSS0024458 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 1.7e-12 75.9 50 70.0
Eucgr.D01727 Eucalyptus grandis HOM05D007275 ORTHO05D009279 1.7e-12 75.9 50 68.0
Gohir.A11G024400 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.7e-12 75.9 50 66.0
Gohir.D11G024100 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.7e-12 75.9 50 66.0
Gorai.007G025800 Gossypium raimondii HOM05D007275 ORTHO05D009279 1.7e-12 75.9 50 66.0
TPR.G3422 Trifolium pratense HOM05D007275 ORTHO05D009279 1.7e-12 75.9 50 68.0
Duzib068G1121 Durio zibethinus HOM05D007275 ORTHO05D009279 2.3e-12 75.5 51 66.7
Oeu063532.1 Olea europaea HOM05D007275 ORTHO05D009279 3.0e-12 75.1 68 52.9
PGSC0003DMG400012158 Solanum tuberosum HOM05D007275 ORTHO05D009279 3.0e-12 75.1 50 64.0
TAR375G1117 Trochodendron aralioides HOM05D007275 ORTHO05D009279 3.9e-12 74.7 50 68.0
CiPaw.12G084200 Carya illinoinensis HOM05D007275 ORTHO05D009279 5.1e-12 74.3 50 68.0
TAR629G0721 Trochodendron aralioides HOM05D007275 ORTHO05D010861 5.1e-12 74.3 50 64.0
Nn3g19047 Nelumbo nucifera HOM05D007275 ORTHO05D009279 6.6e-12 73.9 50 64.0
Rhsim02G0242000 Rhododendron simsii HOM05D007275 ORTHO05D009279 6.6e-12 73.9 54 66.7
COL.COLO4_10681 Corchorus olitorius HOM05D007275 ORTHO05D009279 8.7e-12 73.6 50 66.0
RcHm_v2.0_Chr7g0195121 Rosa chinensis HOM05D007275 ORTHO05D009279 8.7e-12 73.6 65 58.5
FvH4_3g01740 Fragaria vesca HOM05D007275 ORTHO05D009279 1.5e-11 72.8 50 68.0
PGR031G2423 Punica granatum HOM05D007275 ORTHO05D009279 1.5e-11 72.8 50 64.0
Aqoxy7G00131 Aquilegia oxysepala HOM05D007275 ORTHO05D009279 1.9e-11 72.4 46 71.7
Solyc08g082160.3 Solanum lycopersicum HOM05D007275 ORTHO05D009279 1.9e-11 72.4 50 64.0
Sopen08g030440 Solanum pennellii HOM05D007275 ORTHO05D009279 1.9e-11 72.4 50 64.0
MBI06_g46619_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D009279 2.5e-11 72.0 50 64.0
MBI06_g46730_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D000022 2.5e-11 72.0 50 64.0
BcaC09g50944 Brassica carinata HOM05D007275 ORTHO05D009279 3.3e-11 71.6 50 64.0
A01p15130 Brassica napus HOM05D007275 ORTHO05D009279 3.3e-11 71.6 50 64.0
C01p19030 Brassica napus HOM05D007275 ORTHO05D009279 3.3e-11 71.6 50 64.0
BolC1t01829H Brassica oleracea HOM05D007275 ORTHO05D009279 3.3e-11 71.6 50 64.0
FvH4_5g04420 Fragaria vesca HOM05D007275 ORTHO05D009279 3.3e-11 71.6 49 69.4
FAN08G0060 Fragaria x ananassa HOM05D007275 ORTHO05D009279 3.3e-11 71.6 49 69.4
FAN13G1788 Fragaria x ananassa HOM05D007275 ORTHO05D009279 3.3e-11 71.6 49 69.4
FAN18G1142 Fragaria x ananassa HOM05D007275 ORTHO05D009279 3.3e-11 71.6 49 69.4
FAN18G2266 Fragaria x ananassa HOM05D007275 ORTHO05D009279 3.3e-11 71.6 49 69.4
BcaNung01088 Brassica carinata HOM05D007275 ORTHO05D009279 4.3e-11 71.2 50 64.0
BcaNung01089 Brassica carinata HOM05D007275 ORTHO05D009279 4.3e-11 71.2 50 64.0
CANSAT21G2355 Cannabis sativa HOM05D007275 ORTHO05D009279 7.3e-11 70.5 48 66.7
TWI60G1254 Tripterygium wilfordii HOM05D007275 ORTHO05D009279 7.3e-11 70.5 50 62.0
Thhalv10027148m.g Eutrema salsugineum HOM05D007275 ORTHO05D009279 9.6e-11 70.1 52 61.5
HanXRQChr06g0166541 Helianthus annuus HOM05D007275 ORTHO05D009279 9.6e-11 70.1 50 64.0
Migut.A00668 Erythranthe guttata HOM05D007275 ORTHO05D009279 1.3e-10 69.7 51 60.8
SalBow1G0766 Salvia bowleyana HOM05D007275 ORTHO05D009279 1.3e-10 69.7 50 60.0
ECA246G4125 Erigeron canadensis HOM05D007275 ORTHO05D009279 1.6e-10 69.3 50 62.0
SalBow1G5261 Salvia bowleyana HOM05D007275 ORTHO05D009279 2.1e-10 68.9 50 60.0
Psat7g026480 Pisum sativum HOM05D007275 ORTHO05D009279 6.2e-10 67.4 50 66.0
unitig_748.g8124 Utricularia gibba HOM05D007275 ORTHO05D009279 6.2e-10 67.4 63 54.0
CSS0026606 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 1.4e-09 66.2 42 71.4
ClCG07G014960 Citrullus lanatus HOM05D007275 ORTHO05D009279 2.4e-09 65.5 50 58.0
Zm00001eb338790 Zea mays HOM05D007275 ORTHO05D009279 3.1e-09 65.1 49 61.2
Lsat_1_v5_gn_3_10301 Lactuca sativa HOM05D007275 ORTHO05D009279 5.3e-09 64.3 50 58.0
HanXRQChr17g0535191 Helianthus annuus HOM05D007275 ORTHO05D009279 9.0e-09 63.5 50 56.0
CsaV3_4G006490 Cucumis sativus L. HOM05D007275 ORTHO05D009279 3.4e-08 61.6 65 50.8
CDE10G0124 Ceratophyllum demersum HOM05D007275 ORTHO05D009279 4.4e-08 61.2 50 54.0
MELO3C032816.2 Cucumis melo HOM05D007275 ORTHO05D009279 7.6e-08 60.5 65 49.2
CDE10G0242 Ceratophyllum demersum HOM05D000974 ORTHO05D002201 9.9e-08 60.1 50 56.0
ATR0320G041 Amborella trichopoda HOM05D007275 ORTHO05D009279 1.7e-07 59.3 50 54.0
Sed0004885 Sechium edule HOM05D007275 ORTHO05D009279 3.8e-07 58.2 53 56.6


User provided reference genes

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