Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0390101 Lupinus albus HOM05D000003 ORTHO05D000004 9.7e-48 193.0 86 100.0
ECA236G3371 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.9e-11 72.4 69 42.0
HanXRQChr09g0254861 Helianthus annuus HOM05D000003 ORTHO05D000004 3.3e-11 71.6 65 47.7
HanXRQChr16g0524301 Helianthus annuus HOM05D000003 ORTHO05D000004 2.1e-10 68.9 70 37.1
ECA233G0347 Erigeron canadensis HOM05D000003 ORTHO05D000004 8.0e-10 67.0 69 40.6
HanXRQChr04g0127051 Helianthus annuus HOM05D000003 ORTHO05D000004 8.0e-10 67.0 65 44.6
COL.COLO4_20039 Corchorus olitorius HOM05D000003 ORTHO05D000004 1.4e-09 66.2 74 40.5
Lj4g0000250 Lotus japonicus HOM05D000003 ORTHO05D025775 1.8e-09 65.9 68 41.2
ECA240G3834 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.0e-09 64.7 71 36.6
HanXRQChr05g0148651 Helianthus annuus HOM05D000003 ORTHO05D000004 4.0e-09 64.7 66 40.9
HanXRQChr14g0451141 Helianthus annuus HOM05D000003 ORTHO05D000004 4.0e-09 64.7 68 41.2
HanXRQChr13g0387241 Helianthus annuus HOM05D000003 ORTHO05D000004 5.2e-09 64.3 68 41.2
Lalb_Chr20g0108031 Lupinus albus HOM05D011108 ORTHO05D002335 8.9e-09 63.5 72 36.1
TPR.G13582 Trifolium pratense HOM05D000003 ORTHO05D002335 8.9e-09 63.5 67 38.8
HanXRQChr03g0071601 Helianthus annuus HOM05D000003 ORTHO05D000004 1.2e-08 63.2 65 46.2
HanXRQChr09g0246731 Helianthus annuus HOM05D000003 ORTHO05D000004 2.6e-08 62.0 70 35.7
ECA247G0264 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.4e-08 61.6 65 41.5
HanXRQChr02g0037941 Helianthus annuus HOM05D000003 ORTHO05D000004 3.4e-08 61.6 71 43.7
HanXRQChr09g0261431 Helianthus annuus HOM05D000003 ORTHO05D000004 4.4e-08 61.2 68 35.3
HanXRQChr15g0497301 Helianthus annuus HOM05D000003 ORTHO05D000004 4.4e-08 61.2 68 38.2
TPR.G35213 Trifolium pratense HOM05D002545 ORTHO05D002335 4.4e-08 61.2 71 38.0
Aa31LG5G22350 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.7e-08 60.8 68 39.7
Aa31LG7G3480 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.7e-08 60.8 68 39.7
Lalb_Chr18g0059261 Lupinus albus HOM05D011108 ORTHO05D002335 5.7e-08 60.8 78 33.3
Aa31sc466G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 9.8e-08 60.1 69 40.6
Aa31LG3G4270 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.3e-07 59.7 72 43.1
ECA233G5331 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.3e-07 59.7 75 36.0
Aa31sc74G100 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.7e-07 59.3 68 36.8
ECA234G0628 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.7e-07 59.3 65 36.9
ECA238G4438 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.7e-07 59.3 85 31.8
CANSAT80G0814 Cannabis sativa HOM05D000003 ORTHO05D000004 2.2e-07 58.9 72 36.1
Aa31LG1G5100 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.8e-07 58.5 70 38.6
Aqoxy4G00730 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.8e-07 58.5 70 38.6
ECA236G1963 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.7e-07 58.2 75 33.3
ECA238G3311 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.7e-07 58.2 64 40.6
HanXRQChr11g0342611 Helianthus annuus HOM05D000003 ORTHO05D000004 3.7e-07 58.2 65 38.5
QL05p062712 Quercus lobata HOM05D000003 ORTHO05D000004 3.7e-07 58.2 71 35.2
Aa31LG8G16480 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.9e-07 57.8 72 40.3
Aqoxy2G00807 Aquilegia oxysepala HOM05D000003 ORTHO05D008897 4.9e-07 57.8 79 35.4
ECA236G2334 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.9e-07 57.8 64 40.6
ECA236G2457 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.3e-07 57.4 66 33.3
ECA238G3342 Erigeron canadensis HOM05D000062 ORTHO05D000043 6.3e-07 57.4 66 33.3
Psat3g125440 Pisum sativum HOM05D000003 ORTHO05D011336 6.3e-07 57.4 67 35.8
Psat7g209000 Pisum sativum HOM05D000003 ORTHO05D011336 6.3e-07 57.4 85 31.8
Aa31LG1G4840 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.3e-07 57.0 68 38.2
Aa31LG7G12700 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.3e-07 57.0 75 36.0
Aa31LG8G12700 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.3e-07 57.0 68 39.7
Aa31sc210G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.3e-07 57.0 72 40.3
CSS0003020 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 8.3e-07 57.0 71 40.8
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 8.3e-07 57.0 74 31.1
Psat1g154160 Pisum sativum HOM05D000003 ORTHO05D000004 8.3e-07 57.0 70 38.6
TPR.G36671 Trifolium pratense HOM05D002545 ORTHO05D002335 8.3e-07 57.0 70 37.1
Aa31LG2G18410 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.1e-06 56.6 72 38.9
Aa31sc146G90 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.1e-06 56.6 70 37.1
HanXRQChr02g0046591 Helianthus annuus HOM05D000003 ORTHO05D000004 1.1e-06 56.6 65 36.9
Aqoxy1G02620 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.4e-06 56.2 79 38.0
ECA233G5991 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.4e-06 56.2 70 34.3
ECA238G1199 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.4e-06 56.2 75 41.3
Psat5g033640 Pisum sativum HOM05D000003 ORTHO05D000004 1.4e-06 56.2 92 28.3
Aa31LG8G11510 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.8e-06 55.8 72 38.9
BolC3t21561H Brassica oleracea HOM05D000003 ORTHO05D000283 1.8e-06 55.8 73 37.0
ECA247G2816 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.8e-06 55.8 73 30.1
RcHm_v2.0_Chr2g0160431 Rosa chinensis HOM05D000003 ORTHO05D000004 1.8e-06 55.8 75 37.3
Aqoxy2G01708 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.4e-06 55.5 69 39.1
BcaB01g02268 Brassica carinata HOM05D000003 ORTHO05D000411 2.4e-06 55.5 77 33.8
ECA248G1280 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.4e-06 55.5 75 30.7
QL06p011007 Quercus lobata HOM05D000003 ORTHO05D000004 2.4e-06 55.5 75 34.7
Atru.chr12.1368 Acer truncatum HOM05D000003 ORTHO05D000004 3.1e-06 55.1 68 35.3
Aa31LG3G3940 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.1e-06 55.1 70 38.6
Aa31LG4G12740 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.1e-06 55.1 70 34.3
Aa31sc17G250 Aethionema arabicum HOM05D000003 ORTHO05D009772 3.1e-06 55.1 75 33.3
Aqoxy3G01412 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.1e-06 55.1 69 34.8
Aqoxy4G00307 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.1e-06 55.1 69 34.8
ECA233G1266 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.1e-06 55.1 66 30.3
ECA246G2574 Erigeron canadensis HOM05D000014 ORTHO05D000093 3.1e-06 55.1 66 30.3
Lsat_1_v5_gn_5_171481 Lactuca sativa HOM05D000674 ORTHO05D001490 3.1e-06 55.1 65 33.8
PSO170G5107 Papaver somniferum HOM05D000003 ORTHO05D000004 3.1e-06 55.1 71 33.8
QL10p056321 Quercus lobata HOM05D000003 ORTHO05D000167 3.1e-06 55.1 68 36.8
Aa31LG4G1870 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.1e-06 54.7 70 35.7
Aa31sc407G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.1e-06 54.7 68 41.2
BolC2t11594H Brassica oleracea HOM05D000003 ORTHO05D001498 4.1e-06 54.7 74 33.8
RcHm_v2.0_Chr3g0453641 Rosa chinensis HOM05D000003 ORTHO05D000004 4.1e-06 54.7 75 37.3
BcaB04g17562 Brassica carinata HOM05D000003 ORTHO05D001498 5.4e-06 54.3 70 34.3
ECA233G2323 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.4e-06 54.3 75 40.0
ECA247G3849 Erigeron canadensis HOM05D000031 ORTHO05D000030 5.4e-06 54.3 88 31.8
RcHm_v2.0_Chr3g0455401 Rosa chinensis HOM05D000003 ORTHO05D000004 5.4e-06 54.3 75 37.3
Aa31LG11G7720 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.0e-06 53.9 60 45.0
LjContig00141g0007313 Lotus japonicus HOM05D000003 ORTHO05D000004 7.0e-06 53.9 66 37.9
Aa31sc18G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 9.2e-06 53.5 68 35.3
ECA233G2390 Erigeron canadensis HOM05D000003 ORTHO05D000004 9.2e-06 53.5 75 34.7
ECA238G0082 Erigeron canadensis HOM05D000593 ORTHO05D000562 9.2e-06 53.5 65 35.4
ECA238G4791 Erigeron canadensis HOM05D000003 ORTHO05D000004 9.2e-06 53.5 77 32.5
ECA246G3612 Erigeron canadensis HOM05D000003 ORTHO05D000004 9.2e-06 53.5 65 32.3
FvH4_3g23591 Fragaria vesca HOM05D000003 ORTHO05D000004 9.2e-06 53.5 74 36.5
Prupe.1G162400 Prunus persica HOM05D000003 ORTHO05D000022 9.2e-06 53.5 72 33.3


User provided reference genes

Program Settings