Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0390081 Lupinus albus HOM05D003247 ORTHO05D003974 1.8e-90 335.9 166 100.0
Lalb_Chr09g0332971 Lupinus albus HOM05D003247 ORTHO05D003974 1.3e-77 293.1 165 89.1
Lalb_Chr05g0222801 Lupinus albus HOM05D003247 ORTHO05D003974 4.1e-71 271.6 151 88.1
Medtr8g098525 Medicago truncatula HOM05D003247 ORTHO05D003974 5.4e-71 271.2 155 85.2
Lalb_Chr05g0224671 Lupinus albus HOM05D003247 ORTHO05D003974 1.6e-70 269.6 144 91.0
Ca_17516_v3 Cicer arietinum L. HOM05D003247 ORTHO05D003974 1.7e-69 266.2 151 86.1
Glyma.05G209200 Glycine max HOM05D003247 ORTHO05D003974 2.3e-69 265.8 155 85.2
Lj4g0006056 Lotus japonicus HOM05D003247 ORTHO05D003974 1.9e-68 262.7 151 84.8
TPR.G12767 Trifolium pratense HOM05D003247 ORTHO05D003974 2.5e-68 262.3 153 84.3
arahy.Tifrunner.gnm1.ann1.5U7DNF Arachis hypogaea HOM05D003247 ORTHO05D003974 1.6e-67 259.6 153 83.0
Glyma.08G015900 Glycine max HOM05D003247 ORTHO05D003974 1.6e-67 259.6 151 84.8
QL12p032548 Quercus lobata HOM05D003247 ORTHO05D003974 1.6e-67 259.6 160 79.4
arahy.Tifrunner.gnm1.ann1.1Z7M3S Arachis hypogaea HOM05D003247 ORTHO05D003974 2.8e-67 258.8 151 84.1
FAN04G2168 Fragaria x ananassa HOM05D003247 ORTHO05D003974 2.3e-66 255.8 153 81.0
Psat7g031800 Pisum sativum HOM05D003247 ORTHO05D003974 6.8e-66 254.2 151 83.4
Prupe.5G103000 Prunus persica HOM05D003247 ORTHO05D003974 8.9e-66 253.8 163 77.3
Nitab4.5_0001615g0030 Nicotiana tabacum HOM05D003247 ORTHO05D003974 2.6e-65 252.3 151 80.1
VMungo0251G1424 Vigna mungo HOM05D003247 ORTHO05D003974 2.6e-65 252.3 151 82.1
FAN08G0767 Fragaria x ananassa HOM05D003247 ORTHO05D003974 4.4e-65 251.5 153 79.7
FvH4_5g02730 Fragaria vesca HOM05D003247 ORTHO05D003974 5.8e-65 251.1 151 80.8
MD06G1086400 Malus domestica HOM05D003247 ORTHO05D003974 5.8e-65 251.1 163 76.7
FAN18G0212 Fragaria x ananassa HOM05D003247 ORTHO05D003974 7.5e-65 250.8 153 79.7
MD14G1107600 Malus domestica HOM05D003247 ORTHO05D003974 7.5e-65 250.8 151 79.5
Thecc.03G281500 Theobroma cacao HOM05D003247 ORTHO05D003974 7.5e-65 250.8 151 79.5
FAN13G0605 Fragaria x ananassa HOM05D003247 ORTHO05D003974 9.9e-65 250.4 153 80.4
Actinidia01994 Actinidia chinensis HOM05D003247 ORTHO05D003974 2.2e-64 249.2 153 77.1
TWI60G0271 Tripterygium wilfordii HOM05D003247 ORTHO05D003974 2.9e-64 248.8 151 79.5
ECA240G1820 Erigeron canadensis HOM05D003247 ORTHO05D003974 6.4e-64 247.7 151 79.5
Lsat_1_v5_gn_6_86420 Lactuca sativa HOM05D003247 ORTHO05D003974 6.4e-64 247.7 152 78.9
Nitab4.5_0002975g0050 Nicotiana tabacum HOM05D003247 ORTHO05D003974 8.3e-64 247.3 153 77.8
RcHm_v2.0_Chr7g0197201 Rosa chinensis HOM05D003247 ORTHO05D003974 8.3e-64 247.3 151 79.5
Duzib205G1189 Durio zibethinus HOM05D003247 ORTHO05D003974 1.1e-63 246.9 151 78.8
EL10Ac5g12795 Beta vulgaris HOM05D003247 ORTHO05D003974 1.4e-63 246.5 153 79.1
Eucgr.D01833 Eucalyptus grandis HOM05D003247 ORTHO05D003974 1.4e-63 246.5 153 77.1
Manes.02G020950 Manihot esculenta HOM05D003247 ORTHO05D003974 1.4e-63 246.5 151 80.8
Sopen08g029560 Solanum pennellii HOM05D003247 ORTHO05D003974 1.4e-63 246.5 151 78.8
Dinv37625 Davidia involucrata HOM05D003247 ORTHO05D003974 3.2e-63 245.4 153 76.5
Rhsim02G0233100 Rhododendron simsii HOM05D003247 ORTHO05D003974 3.2e-63 245.4 153 75.2
RhsimUnG0160000 Rhododendron simsii HOM05D003247 ORTHO05D003974 3.2e-63 245.4 153 75.2
Gorai.003G157400 Gossypium raimondii HOM05D003247 ORTHO05D003974 4.1e-63 245.0 144 81.2
HanXRQChr03g0086871 Helianthus annuus HOM05D003247 ORTHO05D003974 5.4e-63 244.6 151 79.5
HanXRQChr03g0086881 Helianthus annuus HOM05D003247 ORTHO05D003974 5.4e-63 244.6 151 79.5
HanXRQChr13g0416311 Helianthus annuus HOM05D003247 ORTHO05D003974 5.4e-63 244.6 151 78.8
Actinidia14574 Actinidia chinensis HOM05D003247 ORTHO05D003974 7.1e-63 244.2 151 76.8
CANSAT35G0036 Cannabis sativa HOM05D003247 ORTHO05D003974 9.2e-63 243.8 151 77.5
SGA_v2.0_scaffold173G39167 Striga asiatica HOM05D003247 ORTHO05D003974 9.2e-63 243.8 151 78.8
Peaxi162Scf00119g00138 Petunia axillaris HOM05D003247 ORTHO05D003974 1.2e-62 243.4 153 77.8
Sabra01G0077100 Salix brachista HOM05D003247 ORTHO05D003974 1.2e-62 243.4 151 76.2
GSVIVG01019731001 Vitis vinifera HOM05D003247 ORTHO05D003974 1.2e-62 243.4 145 80.7
Phvul.002G290904 Phaseolus vulgaris HOM05D003247 ORTHO05D003974 1.6e-62 243.0 145 82.8
CSS0029032 Camellia sinensis var. sinensis HOM05D003247 ORTHO05D003974 2.1e-62 242.7 151 78.1
AUR62010702 Chenopodium quinoa HOM05D003247 ORTHO05D003974 2.1e-62 242.7 153 77.1
TWI81G0748 Tripterygium wilfordii HOM05D003247 ORTHO05D003974 2.1e-62 242.7 151 77.5
vmacro11386 Vaccinium macrocarpon HOM05D003247 ORTHO05D003974 2.1e-62 242.7 151 76.8
CiPaw.11G133400 Carya illinoinensis HOM05D003247 ORTHO05D003974 3.5e-62 241.9 145 81.4
Gohir.A03G018700 Gossypium hirsutum HOM05D003247 ORTHO05D003974 3.5e-62 241.9 145 80.0
Cc08_g14910 Coffea canephora HOM05D003247 ORTHO05D003974 4.6e-62 241.5 157 73.2
Cpa.g.sc214.14 Carica papaya HOM05D003247 ORTHO05D003974 6.0e-62 241.1 153 75.8
Atru.chr9.2165 Acer truncatum HOM05D003247 ORTHO05D003974 7.8e-62 240.7 153 75.8
Lsat_1_v5_gn_6_86400 Lactuca sativa HOM05D003247 ORTHO05D003974 7.8e-62 240.7 151 76.2
Lj8A219G33 Lonicera japonica HOM05D003247 ORTHO05D003974 7.8e-62 240.7 144 80.6
Potri.001G101975 Populus trichocarpa HOM05D003247 ORTHO05D003974 7.8e-62 240.7 151 75.5
Hund14825 Selenicereus undatus HOM05D003247 ORTHO05D003974 1.3e-61 240.0 151 77.5
Sc01g0005540 Simmondsia chinensis HOM05D003247 ORTHO05D003974 1.3e-61 240.0 160 73.1
TAR636G0433 Trochodendron aralioides HOM05D003247 ORTHO05D003974 1.7e-61 239.6 153 75.8
Migut.A00742 Erythranthe guttata HOM05D003247 ORTHO05D003974 3.0e-61 238.8 153 76.5
Sabra01G0077200 Salix brachista HOM05D003247 ORTHO05D003974 3.0e-61 238.8 151 74.8
CDE05G0892 Ceratophyllum demersum HOM05D003247 ORTHO05D003974 6.6e-61 237.7 151 76.2
Dinv38927 Davidia involucrata HOM05D003247 ORTHO05D003974 8.6e-61 237.3 150 76.0
PGR031G0275 Punica granatum HOM05D003247 ORTHO05D003974 8.6e-61 237.3 144 77.8
Sc01g0009690 Simmondsia chinensis HOM05D003247 ORTHO05D003974 8.6e-61 237.3 151 74.8
Ah.12g051740 Amaranthus hybridus HOM05D003247 ORTHO05D003974 1.1e-60 236.9 151 76.8
Ciclev10018808m.g Citrus clementina HOM05D003247 ORTHO05D003974 1.9e-60 236.1 153 73.2
Gohir.D08G202250 Gossypium hirsutum HOM05D003247 ORTHO05D003974 1.9e-60 236.1 160 73.1
Potri.003G129500 Populus trichocarpa HOM05D003247 ORTHO05D003974 1.9e-60 236.1 151 74.2
Ah.02g110410 Amaranthus hybridus HOM05D003247 ORTHO05D003974 2.5e-60 235.7 153 74.5
MBI18_g02832_MAGBIO Magnolia biondii HOM05D003247 ORTHO05D003974 3.3e-60 235.3 151 75.5
ATR0680G039 Amborella trichopoda HOM05D003247 ORTHO05D003974 5.6e-60 234.6 152 73.0
Gohir.D03G150200 Gossypium hirsutum HOM05D003247 ORTHO05D003974 5.6e-60 234.6 145 77.9
CSS0019820 Camellia sinensis var. sinensis HOM05D003247 ORTHO05D003974 9.6e-60 233.8 153 74.5
CSS0047123 Camellia sinensis var. sinensis HOM05D003247 ORTHO05D003974 9.6e-60 233.8 153 74.5
C04p29680 Brassica napus HOM05D003247 ORTHO05D003974 1.2e-59 233.4 160 73.8
PSO832G0897 Papaver somniferum HOM05D003247 ORTHO05D003974 1.2e-59 233.4 151 74.2
EL10Ac9g20777 Beta vulgaris HOM05D003247 ORTHO05D003974 2.1e-59 232.6 155 73.5
CAN.G774.61 Capsicum annuum HOM05D003247 ORTHO05D003974 2.8e-59 232.3 145 77.9
Sed0003481 Sechium edule HOM05D003247 ORTHO05D003974 2.8e-59 232.3 151 74.2
THA.LOC104809378 Tarenaya hassleriana HOM05D003247 ORTHO05D003974 2.8e-59 232.3 151 76.2
Aqoxy5G04015 Aquilegia oxysepala HOM05D003247 ORTHO05D003974 3.6e-59 231.9 151 74.8
Duzib084G1173 Durio zibethinus HOM05D003247 ORTHO05D003974 3.6e-59 231.9 151 75.5
PSO210G5648 Papaver somniferum HOM05D003247 ORTHO05D003974 6.2e-59 231.1 151 73.5
BcaB07g31551 Brassica carinata HOM05D003247 ORTHO05D003974 8.1e-59 230.7 151 76.8
BcaC02g10366 Brassica carinata HOM05D003247 ORTHO05D003974 8.1e-59 230.7 151 76.8
HPP92_025967 Vanilla planifolia HOM05D003247 ORTHO05D003974 1.4e-58 229.9 151 73.5
A06p21950 Brassica napus HOM05D003247 ORTHO05D003974 2.4e-58 229.2 153 75.8
Thhalv10023233m.g Eutrema salsugineum HOM05D003247 ORTHO05D003974 2.4e-58 229.2 151 76.8
PSO063G5587 Papaver somniferum HOM05D003247 ORTHO05D003974 2.4e-58 229.2 151 73.5
SalBow1G5596 Salvia bowleyana HOM05D003247 ORTHO05D003974 4.0e-58 228.4 153 72.5
CARHR047420 Cardamine hirsuta HOM05D003247 ORTHO05D003974 5.2e-58 228.0 151 76.2
BolC4t24494H Brassica oleracea HOM05D003247 ORTHO05D003974 6.8e-58 227.6 151 76.2
A06p04610 Brassica napus HOM05D003247 ORTHO05D003974 8.9e-58 227.3 151 76.2
BraA06t23665Z Brassica rapa HOM05D003247 ORTHO05D003974 8.9e-58 227.3 151 76.2
Carub.0002s0107 Capsella rubella HOM05D003247 ORTHO05D003974 1.2e-57 226.9 151 75.5
BraA06t25281Z Brassica rapa HOM05D003247 ORTHO05D003974 2.6e-57 225.7 151 75.5
Sed0014492 Sechium edule HOM05D003247 ORTHO05D003974 2.6e-57 225.7 151 72.2
TPR.G28250 Trifolium pratense HOM05D003247 ORTHO05D003974 2.6e-57 225.7 155 74.8
Migut.E01080 Erythranthe guttata HOM05D003247 ORTHO05D003974 3.4e-57 225.3 153 71.2
Oeu011040.2 Olea europaea HOM05D003247 ORTHO05D003974 3.4e-57 225.3 137 76.6
Zm00001eb038870 Zea mays HOM05D003247 ORTHO05D003974 3.4e-57 225.3 151 72.2
DCAR_008373 Daucus carota HOM05D003247 ORTHO05D003974 4.4e-57 224.9 145 73.8
MBI17_g42619_MAGBIO Magnolia biondii HOM05D003247 ORTHO05D003974 4.4e-57 224.9 153 71.9
AT1G63770 Arabidopsis thaliana HOM05D003247 ORTHO05D003974 5.8e-57 224.6 151 74.2
PSO210G5645 Papaver somniferum HOM05D003247 ORTHO05D003974 5.8e-57 224.6 151 70.9
BcaC08g43016 Brassica carinata HOM05D003247 ORTHO05D003974 9.9e-57 223.8 153 73.9
AL2G11370 Arabidopsis lyrata HOM05D003247 ORTHO05D003974 1.7e-56 223.0 151 74.2
C06p02710 Brassica napus HOM05D003247 ORTHO05D003974 1.7e-56 223.0 151 74.8
Nn1g01570 Nelumbo nucifera HOM05D003247 ORTHO05D003974 6.4e-56 221.1 151 70.2
unitig_61.g26270 Utricularia gibba HOM05D003247 ORTHO05D003974 2.4e-55 219.2 153 67.3
THA.LOC104815066 Tarenaya hassleriana HOM05D003247 ORTHO05D003974 5.4e-55 218.0 151 71.5
CsaV3_5G002690 Cucumis sativus L. HOM05D003247 ORTHO05D003974 7.1e-55 217.6 146 71.2
MSTRG.1858 Avicennia marina HOM05D003247 ORTHO05D003974 9.3e-55 217.2 151 70.9
Nn6g33377 Nelumbo nucifera HOM05D003247 ORTHO05D003974 2.1e-54 216.1 148 70.3
THA.LOC104817937 Tarenaya hassleriana HOM05D003247 ORTHO05D003974 1.0e-53 213.8 157 68.8
Haze_08801 Corylus avellana HOM05D003247 ORTHO05D003974 3.3e-52 208.8 153 68.0
Potri.001G102051 Populus trichocarpa HOM05D003247 ORTHO05D003974 1.3e-51 206.8 129 78.3
Aa31LG2G950 Aethionema arabicum HOM05D003247 ORTHO05D003974 8.1e-51 204.1 153 69.9
CDE08G1495 Ceratophyllum demersum HOM05D003247 ORTHO05D003974 4.4e-49 198.4 121 77.7
unitig_0.g1141 Utricularia gibba HOM05D005096 ORTHO05D003974 9.9e-49 197.2 183 53.6
AagrBONN_evm.TU.Sc2ySwM_228.2960 Anthoceros agrestis HOM05D003247 ORTHO05D003974 1.3e-48 196.8 151 64.2
Medtr8g098545 Medicago truncatula HOM05D003247 ORTHO05D003974 1.1e-47 193.7 105 86.7
HanXRQChr07g0190431 Helianthus annuus HOM05D003247 ORTHO05D003974 1.2e-46 190.3 112 79.5
AUR62017183 Chenopodium quinoa HOM05D003247 ORTHO05D003974 3.0e-45 185.7 153 64.1
SHI07163 Sapria himalayana HOM05D003247 ORTHO05D003974 3.0e-45 185.7 150 64.0
CBR_g951 Chara braunii HOM05D003247 ORTHO05D003974 8.7e-45 184.1 151 60.3
TAR629G1189 Trochodendron aralioides HOM05D003247 ORTHO05D003974 3.3e-44 182.2 139 64.0
Mapoly0042s0035 Marchantia polymorpha HOM05D003247 ORTHO05D003974 6.2e-43 177.9 151 58.3
SMO351G0363 Selaginella moellendorffii HOM05D003247 ORTHO05D003974 8.1e-43 177.6 152 58.6
SMO119G0357 Selaginella moellendorffii HOM05D003247 ORTHO05D003974 1.4e-42 176.8 152 57.9
Pp3c26_1330 Physcomitrium patens HOM05D003247 ORTHO05D003974 1.8e-42 176.4 152 58.6
SMO119G0190 Selaginella moellendorffii HOM05D003247 ORTHO05D003974 2.4e-42 176.0 152 58.6
SMO119G0209 Selaginella moellendorffii HOM05D003247 ORTHO05D003974 9.0e-42 174.1 152 57.2
Pp3c9_1240 Physcomitrium patens HOM05D003247 ORTHO05D003974 1.2e-41 173.7 152 58.6
Pp3c15_1150 Physcomitrium patens HOM05D003247 ORTHO05D003974 4.5e-41 171.8 152 57.9
Gorai.004G213400 Gossypium raimondii HOM05D003247 ORTHO05D003974 7.1e-39 164.5 145 60.0
MCO16G652 Micromonas commoda HOM05D003247 ORTHO05D003974 1.1e-36 157.1 117 63.2
SMO169G0195 Selaginella moellendorffii HOM05D003247 ORTHO05D003974 1.5e-36 156.8 123 57.7
CBR_g30015 Chara braunii HOM05D003247 ORTHO05D003974 2.5e-36 156.0 198 44.9
MELO3C005688.2 Cucumis melo HOM05D003247 ORTHO05D003974 4.8e-35 151.8 136 57.4
SalBow1G0073 Salvia bowleyana HOM05D003247 ORTHO05D003974 4.0e-34 148.7 87 78.2
Cre17.g736650 Chlamydomonas reinhardtii HOM05D003247 ORTHO05D003974 5.3e-34 148.3 151 49.0
PRCOL_00005594 Prasinoderma coloniale HOM05D003247 ORTHO05D003974 2.5e-31 139.4 122 57.4
Gohir.A08G183600 Gossypium hirsutum HOM05D003247 ORTHO05D003974 3.0e-29 132.5 160 51.2
PSO149G0001 Papaver somniferum HOM05D003247 ORTHO05D003974 5.1e-29 131.7 67 89.6
MCO13G113 Micromonas commoda HOM05D003247 ORTHO05D003974 7.4e-28 127.9 162 46.9
BolC6t35397H Brassica oleracea HOM05D003247 ORTHO05D003974 4.8e-27 125.2 72 80.6
ClCG01G002580 Citrullus lanatus HOM05D003247 ORTHO05D003974 2.6e-25 119.4 57 94.7
BolC7t40479H Brassica oleracea HOM05D003247 ORTHO05D042289 7.9e-14 81.3 87 54.0
C07p00300 Brassica napus HOM05D003247 ORTHO05D042289 1.0e-13 80.9 87 54.0
C07p00320 Brassica napus HOM05D003247 ORTHO05D032812 1.5e-09 67.0 61 57.4
ECA240G2658 Erigeron canadensis HOM05D000167 ORTHO05D000994 4.2e-07 58.9 31 80.6


User provided reference genes

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