Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0389751 Lupinus albus HOM05D006075 ORTHO05D007527 1.4e-265 919.1 466 100.0
Lalb_Chr09g0333281 Lupinus albus HOM05D006075 ORTHO05D007527 3.0e-236 821.6 461 89.6
TPR.G19222 Trifolium pratense HOM05D006075 ORTHO05D007527 1.4e-222 776.2 461 83.7
TPR.G23260 Trifolium pratense HOM05D006075 ORTHO05D007527 8.0e-221 770.4 462 83.8
Glyma.17G131000 Glycine max HOM05D006075 ORTHO05D007527 8.8e-220 766.9 461 84.6
Medtr4g102820 Medicago truncatula HOM05D006075 ORTHO05D007527 1.5e-219 766.1 461 83.3
Lj4g0025720 Lotus japonicus HOM05D006075 ORTHO05D007527 2.6e-219 765.4 461 83.9
Phvul.003G211900 Phaseolus vulgaris HOM05D006075 ORTHO05D007527 4.8e-218 761.1 459 84.5
Psat4g067760 Pisum sativum HOM05D006075 ORTHO05D007527 7.0e-217 757.3 461 81.6
arahy.Tifrunner.gnm1.ann1.M2EVQD Arachis hypogaea HOM05D006075 ORTHO05D007527 8.5e-215 750.4 461 80.0
Psat1g082240 Pisum sativum HOM05D006075 ORTHO05D007527 8.5e-215 750.4 462 81.2
arahy.Tifrunner.gnm1.ann1.S8HR28 Arachis hypogaea HOM05D006075 ORTHO05D007527 2.0e-203 712.6 461 77.2
QL12p017421 Quercus lobata HOM05D006075 ORTHO05D007527 2.7e-200 702.2 462 76.0
VMungo1215G1399 Vigna mungo HOM05D006075 ORTHO05D007527 4.5e-200 701.4 414 86.2
CiPaw.11G140500 Carya illinoinensis HOM05D006075 ORTHO05D007527 1.3e-194 683.3 456 75.0
Ciclev10019953m.g Citrus clementina HOM05D006075 ORTHO05D007527 9.2e-193 677.2 463 73.4
Dinv37681 Davidia involucrata HOM05D006075 ORTHO05D007527 3.9e-191 671.8 448 74.6
GSVIVG01019817001 Vitis vinifera HOM05D006075 ORTHO05D007527 4.7e-189 664.8 457 72.2
Atru.chr9.1549 Acer truncatum HOM05D006075 ORTHO05D007527 8.0e-189 664.1 455 72.7
Prupe.5G091900 Prunus persica HOM05D006075 ORTHO05D007527 4.0e-188 661.8 456 73.5
Nn6g34229 Nelumbo nucifera HOM05D006075 ORTHO05D007527 8.9e-188 660.6 463 71.1
CANSAT21G0515 Cannabis sativa HOM05D006075 ORTHO05D007527 1.2e-187 660.2 459 71.9
TWI81G0173 Tripterygium wilfordii HOM05D006075 ORTHO05D007527 2.9e-186 655.6 462 71.6
Potri.001G109200 Populus trichocarpa HOM05D006075 ORTHO05D007527 7.0e-185 651.0 461 70.7
MD06G1073700 Malus domestica HOM05D006075 ORTHO05D007527 9.2e-185 650.6 456 71.5
Eucgr.E00536 Eucalyptus grandis HOM05D006075 ORTHO05D007527 1.0e-183 647.1 456 70.6
Manes.01G066100 Manihot esculenta HOM05D006075 ORTHO05D007527 5.0e-183 644.8 456 71.5
CSS0042428 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 5.6e-182 641.3 442 72.2
RcHm_v2.0_Chr7g0199111 Rosa chinensis HOM05D006075 ORTHO05D007527 7.3e-182 641.0 456 71.5
FAN04G1557 Fragaria x ananassa HOM05D006075 ORTHO05D007527 1.2e-181 640.2 461 70.7
FAN18G0544 Fragaria x ananassa HOM05D006075 ORTHO05D007527 8.0e-181 637.5 456 71.1
FAN08G0877 Fragaria x ananassa HOM05D006075 ORTHO05D007527 2.3e-180 636.0 456 70.8
PSO478G2556 Papaver somniferum HOM05D006075 ORTHO05D007527 2.3e-180 636.0 476 67.4
PSO782G2103 Papaver somniferum HOM05D006075 ORTHO05D007527 4.0e-180 635.2 476 67.4
Thecc.02G127300 Theobroma cacao HOM05D006075 ORTHO05D007527 4.0e-180 635.2 455 71.9
Rhsim07G0094000 Rhododendron simsii HOM05D006075 ORTHO05D007527 5.2e-180 634.8 472 69.1
MD04G1066500 Malus domestica HOM05D006075 ORTHO05D007527 6.8e-180 634.4 437 73.2
Sabra01G0082500 Salix brachista HOM05D006075 ORTHO05D007527 9.8e-179 630.6 500 65.8
Oeu011664.1 Olea europaea HOM05D006075 ORTHO05D007527 1.7e-178 629.8 453 68.9
Carub.0002s0185 Capsella rubella HOM05D006075 ORTHO05D007527 6.4e-178 627.9 450 70.2
Gohir.A01G010200 Gossypium hirsutum HOM05D006075 ORTHO05D007527 6.4e-178 627.9 455 71.6
Gorai.002G011900 Gossypium raimondii HOM05D006075 ORTHO05D007527 1.4e-177 626.7 455 71.4
THA.LOC104818186 Tarenaya hassleriana HOM05D006075 ORTHO05D007527 1.4e-177 626.7 458 69.0
BcaC04g22472 Brassica carinata HOM05D006075 ORTHO05D007527 1.9e-177 626.3 455 69.9
Cc08_g14070 Coffea canephora HOM05D006075 ORTHO05D007527 1.9e-177 626.3 455 70.5
CAN.G981.23 Capsicum annuum HOM05D006075 ORTHO05D007527 2.4e-177 625.9 456 69.5
AT1G63110 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 7.1e-177 624.4 456 69.1
AL2G12410 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 1.6e-176 623.2 455 69.2
A09p15680 Brassica napus HOM05D006075 ORTHO05D007527 2.1e-176 622.9 457 70.2
BraA09t37209Z Brassica rapa HOM05D006075 ORTHO05D007527 2.1e-176 622.9 457 70.2
BcaB07g31383 Brassica carinata HOM05D006075 ORTHO05D007527 3.5e-176 622.1 458 68.8
MSTRG.13821 Avicennia marina HOM05D006075 ORTHO05D007527 1.0e-175 620.5 456 68.4
Thhalv10023435m.g Eutrema salsugineum HOM05D006075 ORTHO05D007527 1.0e-175 620.5 466 69.1
Gohir.D01G009800 Gossypium hirsutum HOM05D006075 ORTHO05D007527 1.0e-175 620.5 455 71.0
Sopen08g028750 Solanum pennellii HOM05D006075 ORTHO05D007527 1.3e-175 620.2 457 69.1
C09p18910 Brassica napus HOM05D006075 ORTHO05D007527 5.1e-175 618.2 457 69.6
Solyc08g080420.4 Solanum lycopersicum HOM05D006075 ORTHO05D007527 5.1e-175 618.2 457 68.7
Sp2g01480 Schrenkiella parvula HOM05D006075 ORTHO05D007527 6.6e-175 617.8 455 69.5
Aa31LG2G590 Aethionema arabicum HOM05D006075 ORTHO05D007527 9.5e-174 614.0 484 66.1
MELO3C005634.2 Cucumis melo HOM05D006075 ORTHO05D007527 2.1e-173 612.8 461 67.9
Lj2A193G48 Lonicera japonica HOM05D006075 ORTHO05D007527 2.8e-173 612.5 437 70.5
Migut.E01290 Erythranthe guttata HOM05D006075 ORTHO05D007527 1.8e-172 609.8 456 67.3
CsaV3_5G003210 Cucumis sativus L. HOM05D006075 ORTHO05D007527 2.6e-171 605.9 461 67.2
ECA240G3011 Erigeron canadensis HOM05D006075 ORTHO05D007527 4.9e-170 601.7 460 66.7
Sed0007766 Sechium edule HOM05D006075 ORTHO05D007527 1.2e-168 597.0 456 67.5
BolC9t54793H Brassica oleracea HOM05D006075 ORTHO05D007527 2.7e-168 595.9 460 68.0
HanXRQChr03g0085661 Helianthus annuus HOM05D006075 ORTHO05D007527 6.0e-168 594.7 459 66.7
PGR042G3166 Punica granatum HOM05D006075 ORTHO05D007527 1.1e-164 583.9 455 65.5
HPP92_001310 Vanilla planifolia HOM05D006075 ORTHO05D007527 8.9e-164 580.9 453 63.6
AT1G12730 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 4.4e-163 578.6 467 63.6
Os02g0688900 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 2.9e-162 575.9 454 63.7
FvH4_5g01570 Fragaria vesca HOM05D006075 ORTHO05D007527 4.2e-161 572.0 411 70.3
Actinidia05225 Actinidia chinensis HOM05D006075 ORTHO05D007527 1.9e-158 563.1 459 63.0
SEGI_27555 Sequoiadendron giganteum HOM05D006075 ORTHO05D007527 4.2e-153 545.4 462 58.0
Carub.0001s1243 Capsella rubella HOM05D006075 ORTHO05D007527 1.6e-152 543.5 461 61.2
EL10Ac5g12736 Beta vulgaris HOM05D006075 ORTHO05D007527 3.5e-152 542.3 439 63.6
Lsat_1_v5_gn_6_87521 Lactuca sativa HOM05D006075 ORTHO05D007527 3.5e-152 542.3 436 64.4
SalBow1G6580 Salvia bowleyana HOM05D006075 ORTHO05D007527 1.0e-151 540.8 554 54.5
Peaxi162Scf00714g00528 Petunia axillaris HOM05D006075 ORTHO05D007527 1.7e-151 540.0 523 56.2
CDE11G0531 Ceratophyllum demersum HOM05D006075 ORTHO05D007527 2.3e-151 539.7 456 61.6
vmacro13924 Vaccinium macrocarpon HOM05D006075 ORTHO05D007527 7.3e-150 534.6 471 60.9
SGA_v2.0_scaffold385G50455 Striga asiatica HOM05D006075 ORTHO05D007527 9.6e-150 534.3 454 61.9
FAN13G2280 Fragaria x ananassa HOM05D006075 ORTHO05D007527 2.6e-147 526.2 381 69.8
TAR629G3145 Trochodendron aralioides HOM05D006075 ORTHO05D007527 1.1e-145 520.8 369 70.2
AL1G24320 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 6.7e-143 511.5 462 58.7
Glyma.05G049100 Glycine max HOM05D006075 ORTHO05D007527 6.7e-143 511.5 354 76.8
FAN08G0114 Fragaria x ananassa HOM05D006075 ORTHO05D007527 9.6e-142 507.7 404 65.8
HanXRQChr11g0323321 Helianthus annuus HOM05D006075 ORTHO05D007527 3.1e-140 502.7 460 59.3
ClCG01G003090 Citrullus lanatus HOM05D006075 ORTHO05D007527 7.9e-136 488.0 463 57.9
TAR629G0535 Trochodendron aralioides HOM05D006075 ORTHO05D007527 1.8e-135 486.9 339 72.3
COL.COLO4_32412 Corchorus olitorius HOM05D006075 ORTHO05D007527 1.9e-134 483.4 473 58.4
Manes.02G026900 Manihot esculenta HOM05D006075 ORTHO05D007527 1.8e-132 476.9 506 54.9
PSO478G1113 Papaver somniferum HOM05D006075 ORTHO05D007527 1.3e-130 470.7 327 71.3
Nitab4.5_0002853g0070 Nicotiana tabacum HOM05D006075 ORTHO05D007527 1.1e-129 467.6 490 53.9
Duzib052G1148 Durio zibethinus HOM05D006075 ORTHO05D007527 2.1e-128 463.4 455 56.9
Nitab4.5_0016932g0010 Nicotiana tabacum HOM05D006075 ORTHO05D007527 3.0e-127 459.5 454 55.7
unitig_744.g24646 Utricularia gibba HOM05D006075 ORTHO05D007527 2.4e-124 449.9 459 53.6
Sc01g0008740 Simmondsia chinensis HOM05D006075 ORTHO05D007527 1.0e-122 444.5 357 62.5
CARHR013020 Cardamine hirsuta HOM05D006075 ORTHO05D007527 5.5e-121 438.7 373 59.8
ATR0322G053 Amborella trichopoda HOM05D006075 ORTHO05D007527 2.1e-120 436.8 332 63.6
Mapoly0001s0316 Marchantia polymorpha HOM05D006075 ORTHO05D007527 1.2e-112 411.0 465 49.2
Haze_08940 Corylus avellana HOM05D006075 ORTHO05D007527 3.6e-112 409.5 276 74.6
Pp3c9_23740 Physcomitrium patens HOM05D006075 ORTHO05D007527 6.1e-112 408.7 459 46.2
PGSC0003DMG400003033 Solanum tuberosum HOM05D006075 ORTHO05D007527 1.0e-111 407.9 437 52.6
SMO270G0127 Selaginella moellendorffii HOM05D006075 ORTHO05D007527 2.9e-106 389.8 470 46.6
CARHR048400 Cardamine hirsuta HOM05D006075 ORTHO05D007527 2.7e-104 383.3 314 64.0
Ah.12g057560 Amaranthus hybridus HOM05D006075 ORTHO05D007527 1.4e-100 370.9 446 49.6
Sed0016840 Sechium edule HOM05D006075 ORTHO05D007527 4.7e-96 355.9 272 66.5
Hund14727 Selenicereus undatus HOM05D006075 ORTHO05D007527 2.4e-92 343.6 463 46.4
Zm00001eb251050 Zea mays HOM05D006075 ORTHO05D007527 6.5e-90 335.5 305 56.1
Cpa.g.sc74.79 Carica papaya HOM05D006075 ORTHO05D007527 9.5e-81 305.1 292 56.5
Dinv39003 Davidia involucrata HOM05D006075 ORTHO05D007527 9.8e-78 295.0 290 54.5
AagrBONN_evm.TU.Sc2ySwM_117.1004 Anthoceros agrestis HOM05D006075 ORTHO05D007527 1.5e-73 281.2 368 43.2
CBR_g17923 Chara braunii HOM05D006075 ORTHO05D007527 2.7e-67 260.4 756 27.1
CSS0009197 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 1.0e-66 258.5 429 41.0
Ca_20251_v3 Cicer arietinum L. HOM05D006075 ORTHO05D007527 1.7e-66 257.7 155 81.3
Os01g0870201 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 2.3e-66 257.3 462 36.4
TAR636G1294 Trochodendron aralioides HOM05D006075 ORTHO05D007527 5.1e-42 176.4 150 61.3
AUR62017286 Chenopodium quinoa HOM05D006075 ORTHO05D007527 1.5e-38 164.9 178 52.2
MCO15G123 Micromonas commoda HOM05D006075 ORTHO05D007527 1.4e-36 158.3 454 29.1
C09p15950 Brassica napus HOM05D006075 ORTHO05D007527 6.4e-29 132.9 91 73.6
AUR62010644 Chenopodium quinoa HOM05D006075 ORTHO05D007527 8.4e-29 132.5 179 43.6
TAR636G2798 Trochodendron aralioides HOM05D006075 ORTHO05D007527 1.1e-25 122.1 67 85.1
PRCOL_00005762 Prasinoderma coloniale HOM05D006075 ORTHO05D007527 1.3e-24 118.6 517 24.4
BolC9t54506H Brassica oleracea HOM05D006075 ORTHO05D007527 5.3e-23 113.2 108 60.2
Eucgr.H02816 Eucalyptus grandis HOM05D005128 ORTHO05D006227 5.8e-22 109.8 76 68.4
ATR0322G060 Amborella trichopoda HOM05D006075 ORTHO05D007527 1.1e-20 105.5 86 62.8
Cre03.g150400 Chlamydomonas reinhardtii HOM05D006075 ORTHO05D007527 2.2e-13 81.3 168 29.8
Actinidia27405 Actinidia chinensis HOM05D006075 ORTHO05D007527 3.8e-13 80.5 62 64.5
Pp3c15_22645 Physcomitrium patens HOM05D006075 ORTHO05D007527 3.0e-10 70.9 132 35.6
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 6.3e-08 63.2 82 42.7


User provided reference genes

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