Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0389321 Lupinus albus HOM05D000002 ORTHO05D238497 2.5e-30 134.8 70 100.0
CSS0039053 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.3e-12 73.9 69 53.6
CSS0038576 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.1e-12 73.2 69 53.6
CSS0042232 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.1e-12 73.2 69 53.6
CSS0044431 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.1e-12 73.2 69 52.2
ECA232G0739 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.9e-10 68.2 68 48.5
ECA234G0762 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.9e-10 68.2 68 48.5
Nn8g39601 Nelumbo nucifera HOM05D000002 ORTHO05D000001 5.0e-10 67.4 68 50.0
THA.LOC104817067 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 8.5e-10 66.6 68 52.9
Atru.chr8.532 Acer truncatum HOM05D000002 ORTHO05D000001 2.5e-09 65.1 68 50.0
Atru.chr2.2580 Acer truncatum HOM05D000002 ORTHO05D000001 3.2e-09 64.7 68 47.1
Atru.chr6.1164 Acer truncatum HOM05D000002 ORTHO05D000001 4.2e-09 64.3 68 47.1
HanXRQChr15g0476521 Helianthus annuus HOM05D000002 ORTHO05D000001 4.2e-09 64.3 68 50.0
ECA246G3662 Erigeron canadensis HOM05D000006 ORTHO05D000001 7.2e-09 63.5 68 47.1
Atru.chr13.1910 Acer truncatum HOM05D000002 ORTHO05D000001 9.4e-09 63.2 68 44.1
TAR301G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 9.4e-09 63.2 67 47.8
BolC8t49178H Brassica oleracea HOM05D000114 ORTHO05D000075 1.2e-08 62.8 68 48.5
HanXRQChr17g0570071 Helianthus annuus HOM05D000002 ORTHO05D000001 2.1e-08 62.0 68 48.5
TPR.G33487 Trifolium pratense HOM05D000002 ORTHO05D000001 3.6e-08 61.2 68 50.0
CSS0045539 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.7e-08 60.8 61 50.8
HanXRQChr05g0138601 Helianthus annuus HOM05D000002 ORTHO05D000001 4.7e-08 60.8 67 50.7
HanXRQChr07g0187191 Helianthus annuus HOM05D000002 ORTHO05D000001 4.7e-08 60.8 67 50.7
ECA238G4167 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.0e-08 60.1 68 50.0
ECA238G4695 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.0e-08 60.1 68 45.6
C08p15500 Brassica napus HOM05D000002 ORTHO05D000075 1.0e-07 59.7 49 59.2
THA.LOC104818098 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.0e-07 59.7 68 47.1
TPR.G22883 Trifolium pratense HOM05D000269 ORTHO05D000216 1.0e-07 59.7 67 46.3
TPR.G17816 Trifolium pratense HOM05D000002 ORTHO05D000001 1.4e-07 59.3 68 45.6
TPR.G19412 Trifolium pratense HOM05D000002 ORTHO05D000001 1.4e-07 59.3 68 45.6
ECA232G1227 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-07 58.9 68 42.6
HanXRQChr14g0448191 Helianthus annuus HOM05D000002 ORTHO05D000001 1.8e-07 58.9 68 44.1
CSS0001737 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-07 57.8 68 45.6
CSS0013254 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-07 57.8 68 45.6
CSS0015658 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-07 57.8 68 45.6
ECA232G3319 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.0e-07 57.8 68 42.6
MD00G1024600 Malus domestica HOM05D000002 ORTHO05D000001 4.0e-07 57.8 68 47.1
MD12G1185900 Malus domestica HOM05D000002 ORTHO05D000001 4.0e-07 57.8 68 47.1
TPR.G11043 Trifolium pratense HOM05D000002 ORTHO05D000001 4.0e-07 57.8 68 42.6
TPR.G3798 Trifolium pratense HOM05D000002 ORTHO05D000001 4.0e-07 57.8 67 47.8
ECA232G3680 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.2e-07 57.4 68 48.5
ECA234G1407 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.2e-07 57.4 68 41.2
HanXRQChr09g0266471 Helianthus annuus HOM05D000002 ORTHO05D000001 5.2e-07 57.4 68 42.6
TAR180G0004 Trochodendron aralioides HOM05D000002 ORTHO05D000001 5.2e-07 57.4 68 44.1
CSS0005122 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.7e-07 57.0 68 44.1
ECA234G2692 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.8e-07 56.6 65 43.1
ECA246G1142 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.8e-07 56.6 68 41.2
MD16G1247000 Malus domestica HOM05D000002 ORTHO05D003361 8.8e-07 56.6 68 42.6
ECA240G0803 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-06 56.2 68 41.2
Sed0009540 Sechium edule HOM05D000002 ORTHO05D000001 1.2e-06 56.2 68 45.6
Atru.chr9.1721 Acer truncatum HOM05D000002 ORTHO05D000001 1.5e-06 55.8 68 44.1
Aa31LG3G5060 Aethionema arabicum HOM05D000002 ORTHO05D000001 1.5e-06 55.8 68 48.5
ECA232G0091 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-06 55.8 68 47.1
TPR.G14261 Trifolium pratense HOM05D000002 ORTHO05D000001 1.5e-06 55.8 68 45.6
CSS0047136 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-06 55.5 68 47.1
ECA236G2708 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-06 55.5 68 42.6
HanXRQChr17g0568341 Helianthus annuus HOM05D000002 ORTHO05D000001 2.0e-06 55.5 68 45.6
Hma1.2p1_0706F.1_g207010 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.0e-06 55.5 70 45.7
TPR.G27418 Trifolium pratense HOM05D000002 ORTHO05D000001 2.0e-06 55.5 67 43.3
TPR.G35790 Trifolium pratense HOM05D000002 ORTHO05D000001 2.0e-06 55.5 68 44.1
TAR181G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.0e-06 55.5 67 47.8
CSS0012998 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.6e-06 55.1 49 55.1
CSS0014384 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.3e-06 54.7 68 44.1
ECA240G2866 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.3e-06 54.7 62 45.2
HanXRQChr05g0138881 Helianthus annuus HOM05D000002 ORTHO05D000001 3.3e-06 54.7 68 45.6
HanXRQChr09g0254161 Helianthus annuus HOM05D000002 ORTHO05D000001 3.3e-06 54.7 68 44.1
TPR.G29769 Trifolium pratense HOM05D000002 ORTHO05D000001 3.3e-06 54.7 67 43.3
CSS0032534 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.4e-06 54.3 49 55.1
ECA232G0699 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-06 54.3 68 39.7
ECA233G3870 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-06 54.3 49 53.1
ECA248G2841 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-06 54.3 49 53.1
HanXRQChr07g0200331 Helianthus annuus HOM05D000002 ORTHO05D000001 4.4e-06 54.3 66 45.5
CSS0031686 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.7e-06 53.9 68 47.1
ClCG08G002140 Citrullus lanatus HOM05D000002 ORTHO05D000001 7.5e-06 53.5 68 42.6
ECA233G0883 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.5e-06 53.5 68 41.2
Hma1.2p1_0180F.1_g079760 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.5e-06 53.5 67 44.8
SEGI_13448 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 7.5e-06 53.5 68 44.1
CSS0005961 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.7e-06 53.1 68 39.7
CSS0015054 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.7e-06 53.1 68 39.7
CSS0029542 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.7e-06 53.1 68 39.7
CSS0041077 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.7e-06 53.1 68 39.7
ECA236G2445 Erigeron canadensis HOM05D000006 ORTHO05D000001 9.7e-06 53.1 68 39.7
ECA240G1759 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.7e-06 53.1 68 44.1
ECA248G2283 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.7e-06 53.1 68 41.2
Rhsim02G0101600 Rhododendron simsii HOM05D000002 ORTHO05D000001 9.7e-06 53.1 36 63.9


User provided reference genes

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