Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0389101 Lupinus albus HOM05D005407 ORTHO05D006544 1.8e-168 595.9 306 100.0
TPR.G23890 Trifolium pratense HOM05D005407 ORTHO05D006544 6.5e-30 135.6 308 38.3
VMungo1011G0001 Vigna mungo HOM05D005407 ORTHO05D006544 1.2e-28 131.3 314 39.2
Glyma.17G164300 Glycine max HOM05D005407 ORTHO05D006544 1.6e-28 131.0 311 37.6
Lj4g0004383 Lotus japonicus HOM05D005407 ORTHO05D006544 2.1e-28 130.6 315 39.4
Glyma.05G103000 Glycine max HOM05D005407 ORTHO05D006544 3.6e-28 129.8 307 39.1
Lj2g0008966 Lotus japonicus HOM05D005407 ORTHO05D006544 2.0e-26 124.0 320 35.9
Psat4g083080 Pisum sativum HOM05D005407 ORTHO05D006544 4.4e-26 122.9 319 37.6
Glyma.11G050800 Glycine max HOM05D005407 ORTHO05D006544 7.5e-26 122.1 302 39.4
arahy.Tifrunner.gnm1.ann1.IRX7P6 Arachis hypogaea HOM05D005407 ORTHO05D006544 1.4e-24 117.9 328 36.6
arahy.Tifrunner.gnm1.ann1.UV71K9 Arachis hypogaea HOM05D005407 ORTHO05D006544 2.0e-23 114.0 331 36.0
Phvul.002G013600 Phaseolus vulgaris HOM05D005407 ORTHO05D006544 3.5e-23 113.2 313 34.5
CiPaw.02G004700 Carya illinoinensis HOM05D005407 ORTHO05D006544 4.2e-21 106.3 324 32.4
VMungo1215G1030 Vigna mungo HOM05D005407 ORTHO05D006544 5.5e-21 105.9 288 35.1
Gohir.A02G153500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 3.6e-20 103.2 276 34.1
TAR628G1677 Trochodendron aralioides HOM05D005407 ORTHO05D006544 1.0e-19 101.7 320 34.4
Nn5g30501 Nelumbo nucifera HOM05D005407 ORTHO05D006544 1.4e-19 101.3 303 34.7
Gohir.A12G074500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.8e-19 100.9 318 32.4
Potri.007G051800 Populus trichocarpa HOM05D005407 ORTHO05D006544 4.0e-19 99.8 274 34.3
Dinv26896 Davidia involucrata HOM05D005407 ORTHO05D006544 5.2e-19 99.4 317 32.8
CiPaw.01G007800 Carya illinoinensis HOM05D005407 ORTHO05D006544 2.6e-18 97.1 318 34.6
Gohir.D12G072700 Gossypium hirsutum HOM05D005407 ORTHO05D006544 3.4e-18 96.7 311 31.8
Glyma.01G191400 Glycine max HOM05D005407 ORTHO05D006544 4.4e-18 96.3 298 35.2
Gorai.008G080000 Gossypium raimondii HOM05D005407 ORTHO05D006544 4.4e-18 96.3 311 31.8
TWI09G0600 Tripterygium wilfordii HOM05D005407 ORTHO05D006544 3.7e-17 93.2 308 32.1
Nitab4.5_0003878g0070 Nicotiana tabacum HOM05D005407 ORTHO05D006544 6.3e-17 92.4 303 34.7
QL06p039956 Quercus lobata HOM05D005407 ORTHO05D006544 6.3e-17 92.4 314 33.1
Gohir.A11G217700 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.1e-16 91.7 321 32.1
Duzib187G0216 Durio zibethinus HOM05D005407 ORTHO05D006544 2.4e-16 90.5 290 32.4
Gorai.003G028600 Gossypium raimondii HOM05D005407 ORTHO05D006544 3.1e-16 90.1 276 32.2
Gohir.D03G026900 Gossypium hirsutum HOM05D005407 ORTHO05D006544 7.0e-16 89.0 276 31.9
Sabra05G0114800 Salix brachista HOM05D005407 ORTHO05D006544 1.2e-15 88.2 290 31.0
Sabra05G0115900 Salix brachista HOM05D005407 ORTHO05D006544 1.2e-15 88.2 290 31.0
MSTRG.2839 Avicennia marina HOM05D005407 ORTHO05D006544 2.0e-15 87.4 216 38.0
Cfa004094 Carpinus fangiana HOM05D005407 ORTHO05D006544 2.7e-15 87.0 280 33.2
Oeu040602.1 Olea europaea HOM05D005407 ORTHO05D006544 2.7e-15 87.0 309 31.1
Gorai.007G220900 Gossypium raimondii HOM05D005407 ORTHO05D006544 5.9e-15 85.9 335 32.2
Duzib264G0474 Durio zibethinus HOM05D005407 ORTHO05D006544 7.7e-15 85.5 337 30.9
Nn1g04631 Nelumbo nucifera HOM05D005407 ORTHO05D006544 7.7e-15 85.5 289 32.9
Nitab4.5_0007941g0010 Nicotiana tabacum HOM05D005407 ORTHO05D006544 7.7e-15 85.5 316 32.9
Aqoxy6G02765 Aquilegia oxysepala HOM05D005407 ORTHO05D006544 1.3e-14 84.7 193 37.3
Potri.005G145100 Populus trichocarpa HOM05D005407 ORTHO05D006544 1.3e-14 84.7 333 30.9
Haze_15320 Corylus avellana HOM05D005407 ORTHO05D006544 1.7e-14 84.3 280 33.9
Gohir.D11G205800 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.7e-14 84.3 345 31.3
CsaV3_6G043820 Cucumis sativus L. HOM05D005407 ORTHO05D006544 2.9e-14 83.6 328 31.1
GSVIVG01000158001 Vitis vinifera HOM05D005407 ORTHO05D006544 2.9e-14 83.6 306 31.7
Medtr4g095320 Medicago truncatula HOM05D005407 ORTHO05D006544 5.0e-14 82.8 302 33.4
Sabra07G0045500 Salix brachista HOM05D005407 ORTHO05D006544 6.6e-14 82.4 275 31.3
Manes.13G114000 Manihot esculenta HOM05D005407 ORTHO05D006544 1.1e-13 81.6 311 33.4
SGA_v2.0_scaffold15G07407 Striga asiatica HOM05D005407 ORTHO05D006544 1.6e-12 77.8 282 29.4
CAN.G1075.9 Capsicum annuum HOM05D005407 ORTHO05D006544 3.6e-12 76.6 190 34.2
Actinidia21238 Actinidia chinensis HOM05D005407 ORTHO05D006544 4.7e-12 76.3 302 29.8
SalBow1G5175 Salvia bowleyana HOM05D005407 ORTHO05D006544 4.7e-12 76.3 197 35.0
Ciclev10025829m.g Citrus clementina HOM05D005407 ORTHO05D006544 8.0e-12 75.5 337 28.8
Duzib147G1232 Durio zibethinus HOM05D005407 ORTHO05D006544 8.0e-12 75.5 334 31.7
PSO675G4008 Papaver somniferum HOM05D005407 ORTHO05D006544 1.4e-11 74.7 290 30.3
Gohir.A10G090300 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.8e-11 74.3 312 30.8
HanXRQChr12g0373231 Helianthus annuus HOM05D005407 ORTHO05D006544 2.3e-11 73.9 291 30.9
MD15G1292600 Malus domestica HOM05D005407 ORTHO05D006544 2.3e-11 73.9 327 30.9
MSTRG.3457 Avicennia marina HOM05D005407 ORTHO05D006544 3.0e-11 73.6 280 32.9
Gorai.011G107400 Gossypium raimondii HOM05D005407 ORTHO05D006544 5.2e-11 72.8 315 31.4
Cpa.g.sc6.55 Carica papaya HOM05D005407 ORTHO05D006544 6.8e-11 72.4 320 32.2
Lsat_1_v5_gn_3_87740 Lactuca sativa HOM05D005407 ORTHO05D006544 6.8e-11 72.4 284 31.0
MSTRG.23698 Avicennia marina HOM05D005407 ORTHO05D006544 1.2e-10 71.6 310 30.6
Eucgr.I00726 Eucalyptus grandis HOM05D005407 ORTHO05D006544 1.2e-10 71.6 306 30.1
MELO3C007607.2 Cucumis melo HOM05D005407 ORTHO05D006544 1.5e-10 71.2 325 28.9
Phvul.003G237500 Phaseolus vulgaris HOM05D005407 ORTHO05D006544 3.4e-10 70.1 280 30.7
Sed0008783 Sechium edule HOM05D005407 ORTHO05D006544 4.4e-10 69.7 310 29.0
ClCG01G017290 Citrullus lanatus HOM05D005407 ORTHO05D006544 7.5e-10 68.9 318 28.3
Gohir.D10G097800 Gossypium hirsutum HOM05D005407 ORTHO05D006544 9.8e-10 68.6 315 30.8
Actinidia32821 Actinidia chinensis HOM05D005407 ORTHO05D006544 1.3e-09 68.2 237 32.1
Sopen02g037270 Solanum pennellii HOM05D005407 ORTHO05D006544 1.7e-09 67.8 243 32.1
Prupe.6G224800 Prunus persica HOM05D005407 ORTHO05D006544 2.9e-09 67.0 313 30.4
Solyc02g092720.1 Solanum lycopersicum HOM05D005407 ORTHO05D006544 6.3e-09 65.9 247 30.8
Lsat_1_v5_gn_4_162000 Lactuca sativa HOM05D005407 ORTHO05D006544 8.3e-09 65.5 300 28.0
Solyc03g150114.1 Solanum lycopersicum HOM05D005407 ORTHO05D006544 8.3e-09 65.5 227 29.1
CANSAT01G3084 Cannabis sativa HOM05D005407 ORTHO05D006544 1.1e-08 65.1 289 28.0
PGSC0003DMG400024943 Solanum tuberosum HOM05D005407 ORTHO05D006544 2.4e-08 63.9 233 32.2
PSO541G0358 Papaver somniferum HOM05D005407 ORTHO05D006544 4.1e-08 63.2 287 30.0
TWI53G1118 Tripterygium wilfordii HOM05D005407 ORTHO05D006544 7.0e-08 62.4 324 29.6
MD02G1181700 Malus domestica HOM05D005407 ORTHO05D006544 9.2e-08 62.0 296 32.1
Sed0011473 Sechium edule HOM05D005407 ORTHO05D006544 1.2e-07 61.6 233 30.0
FAN23G2725 Fragaria x ananassa HOM05D005407 ORTHO05D006544 1.6e-07 61.2 305 28.5
FAN28G2899 Fragaria x ananassa HOM05D005407 ORTHO05D006544 2.7e-07 60.5 300 31.0
Cc07_g06740 Coffea canephora HOM05D005407 ORTHO05D006544 3.5e-07 60.1 305 29.2
EL10Ac6g15663 Beta vulgaris HOM05D005407 ORTHO05D006544 4.6e-07 59.7 310 27.4
PGR004G2820 Punica granatum HOM05D005407 ORTHO05D006544 1.7e-06 57.8 321 29.0
Thecc.01G067900 Theobroma cacao HOM05D005407 ORTHO05D006544 1.7e-06 57.8 320 27.2
FAN19G1545 Fragaria x ananassa HOM05D005407 ORTHO05D006544 2.9e-06 57.0 304 30.6
Atru.chr3.207 Acer truncatum HOM05D005407 ORTHO05D006544 5.0e-06 56.2 168 31.5
CDE04G2817 Ceratophyllum demersum HOM05D005407 ORTHO05D006544 5.0e-06 56.2 206 31.1
Migut.K00242 Erythranthe guttata HOM05D003020 ORTHO05D003226 6.6e-06 55.8 116 38.8
FAN26G3453 Fragaria x ananassa HOM05D005407 ORTHO05D006544 8.6e-06 55.5 338 29.6


User provided reference genes

Program Settings