Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0388581 Lupinus albus HOM05D001750 ORTHO05D001825 4.3e-46 187.6 91 100.0
Lalb_Chr07g0191701 Lupinus albus HOM05D001750 ORTHO05D001825 1.8e-36 155.6 90 86.7
Medtr4g051300 Medicago truncatula HOM05D001750 ORTHO05D001825 2.8e-21 105.1 90 64.4
LjContig00318g0010147 Lotus japonicus HOM05D001750 ORTHO05D001825 1.2e-19 99.8 90 61.1
LjContig00319g0009462 Lotus japonicus HOM05D001750 ORTHO05D001825 1.2e-19 99.8 90 61.1
Medtr7g021740 Medicago truncatula HOM05D001750 ORTHO05D001825 5.7e-14 80.9 90 54.4
arahy.Tifrunner.gnm1.ann1.B6WU7N Arachis hypogaea HOM05D001750 ORTHO05D001825 8.2e-13 77.0 83 53.0
Sed0000095 Sechium edule HOM05D001750 ORTHO05D001825 1.2e-11 73.2 90 48.9
EL10As15g24136 Beta vulgaris HOM05D001750 ORTHO05D001825 2.2e-10 68.9 86 46.5
Medtr3g032590 Medicago truncatula HOM05D000267 ORTHO05D016230 5.0e-10 67.8 59 66.1
BolSC35t60699H Brassica oleracea HOM05D001750 ORTHO05D001825 9.4e-09 63.5 90 45.6
Lj9P89T20 Lonicera japonica HOM05D001750 ORTHO05D001825 1.2e-08 63.2 90 46.7
BolSC37t60789H Brassica oleracea HOM05D001750 ORTHO05D001825 2.7e-08 62.0 90 44.4
BolSC45t60914H Brassica oleracea HOM05D001750 ORTHO05D001825 2.7e-08 62.0 90 44.4
BolSC49t61137H Brassica oleracea HOM05D001750 ORTHO05D001825 2.7e-08 62.0 90 44.4
BraSC103t45424Z Brassica rapa HOM05D001750 ORTHO05D001825 2.7e-08 62.0 90 44.4
BraSC25t45905Z Brassica rapa HOM05D001750 ORTHO05D001825 2.7e-08 62.0 90 44.4
BraSC59t46546Z Brassica rapa HOM05D001750 ORTHO05D001825 2.7e-08 62.0 90 44.4
ATCG01010 Arabidopsis thaliana HOM05D001750 ORTHO05D001825 4.7e-08 61.2 90 43.3
BolSC44t60818H Brassica oleracea HOM05D001750 ORTHO05D001825 4.7e-08 61.2 90 44.4
Lalb_Chr03g0039401 Lupinus albus HOM05D001750 ORTHO05D001825 1.4e-07 59.7 42 73.8
PGR111G0046 Punica granatum HOM05D001750 ORTHO05D001825 1.8e-07 59.3 89 44.9
CAN.G134.7 Capsicum annuum HOM05D001750 ORTHO05D001825 2.3e-07 58.9 90 47.8
CAN.G1431.3 Capsicum annuum HOM05D001750 ORTHO05D001825 2.3e-07 58.9 90 47.8
CAN.G1526.5 Capsicum annuum HOM05D001750 ORTHO05D001825 2.3e-07 58.9 90 47.8
CAN.G413.7 Capsicum annuum HOM05D001750 ORTHO05D001825 2.3e-07 58.9 90 47.8
CAN.G1045.16 Capsicum annuum HOM05D001750 ORTHO05D001825 3.0e-07 58.5 90 47.8
EL10As28g24255 Beta vulgaris HOM05D001750 ORTHO05D001825 3.9e-07 58.2 85 43.5
DCAR_032533 Daucus carota HOM05D001750 ORTHO05D001825 3.9e-07 58.2 90 46.7
Gohir.1Z049581 Gossypium hirsutum HOM05D001750 ORTHO05D001825 6.7e-07 57.4 61 52.5
FvH4_c3g00021 Fragaria vesca HOM05D001750 ORTHO05D001825 1.1e-06 56.6 91 42.9
Potri.001G342933 Populus trichocarpa HOM05D001750 ORTHO05D001825 1.1e-06 56.6 66 50.0
Lj2P1238T72 Lonicera japonica HOM05D001750 ORTHO05D001825 1.5e-06 56.2 90 42.2
PGSC0003DMG400029008 Solanum tuberosum HOM05D001750 ORTHO05D001825 2.0e-06 55.8 90 45.6
EL10Ac1g00371 Beta vulgaris HOM05D001750 ORTHO05D001825 2.6e-06 55.5 85 42.4
Psat5g142840 Pisum sativum HOM05D001750 ORTHO05D001825 2.6e-06 55.5 53 60.4
HanXRQChr06g0182971 Helianthus annuus HOM05D001750 ORTHO05D001825 9.7e-06 53.5 91 40.7


User provided reference genes

Program Settings