Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0388561 Lupinus albus HOM05D001750 ORTHO05D001825 3.3e-113 411.8 214 100.0
Lalb_Chr03g0039401 Lupinus albus HOM05D001750 ORTHO05D001825 7.7e-86 320.9 222 80.2
Medtr4g006150 Medicago truncatula HOM05D001750 ORTHO05D001825 3.7e-80 302.0 222 74.8
Medtr4g051300 Medicago truncatula HOM05D001750 ORTHO05D001825 3.7e-80 302.0 222 74.8
Medtr7g021740 Medicago truncatula HOM05D001750 ORTHO05D001825 3.7e-80 302.0 222 74.8
LjContig00318g0010147 Lotus japonicus HOM05D001750 ORTHO05D001825 2.4e-79 299.3 222 75.2
LjContig00319g0009462 Lotus japonicus HOM05D001750 ORTHO05D001825 2.4e-79 299.3 222 75.2
Sed0000095 Sechium edule HOM05D001750 ORTHO05D001825 7.7e-78 294.3 222 72.1
arahy.Tifrunner.gnm1.ann1.B6WU7N Arachis hypogaea HOM05D001750 ORTHO05D001825 3.2e-76 288.9 224 73.2
PGR111G0046 Punica granatum HOM05D001750 ORTHO05D001825 4.2e-76 288.5 221 71.5
arahy.Tifrunner.gnm1.ann1.5P7K6N Arachis hypogaea HOM05D001750 ORTHO05D001825 7.2e-76 287.7 224 73.2
Gohir.1Z049581 Gossypium hirsutum HOM05D001750 ORTHO05D001825 2.1e-75 286.2 222 70.7
HanXRQChr02g0059681 Helianthus annuus HOM05D001750 ORTHO05D001825 1.4e-74 283.5 221 71.0
HanXRQChr05g0152401 Helianthus annuus HOM05D001750 ORTHO05D001825 1.4e-74 283.5 221 71.0
HanXRQChr06g0182971 Helianthus annuus HOM05D001750 ORTHO05D001825 1.4e-74 283.5 221 71.0
HanXRQChr09g0258551 Helianthus annuus HOM05D001750 ORTHO05D001825 1.4e-74 283.5 221 71.0
HanXRQChr11g0323711 Helianthus annuus HOM05D001750 ORTHO05D001825 1.4e-74 283.5 221 71.0
HanXRQCPg0580391 Helianthus annuus HOM05D001750 ORTHO05D001825 1.4e-74 283.5 221 71.0
CAN.G1045.16 Capsicum annuum HOM05D001750 ORTHO05D001825 1.8e-74 283.1 222 69.4
Gohir.A02G134105 Gossypium hirsutum HOM05D001750 ORTHO05D001825 2.3e-74 282.7 222 70.3
CAN.G134.7 Capsicum annuum HOM05D001750 ORTHO05D001825 3.0e-74 282.3 222 69.8
CAN.G1431.3 Capsicum annuum HOM05D001750 ORTHO05D001825 3.0e-74 282.3 222 69.8
CAN.G413.7 Capsicum annuum HOM05D001750 ORTHO05D001825 3.0e-74 282.3 222 69.8
DCAR_032533 Daucus carota HOM05D001750 ORTHO05D001825 5.1e-74 281.6 222 70.7
CAN.G1526.5 Capsicum annuum HOM05D001750 ORTHO05D001825 1.5e-73 280.0 222 69.4
Gohir.A04G039195 Gossypium hirsutum HOM05D001750 ORTHO05D001825 4.4e-73 278.5 222 69.4
Lj2P1238T72 Lonicera japonica HOM05D001750 ORTHO05D001825 7.4e-73 277.7 222 68.0
Potri.001G342933 Populus trichocarpa HOM05D001750 ORTHO05D001825 3.7e-72 275.4 224 69.2
FvH4_c3g00021 Fragaria vesca HOM05D001750 ORTHO05D001825 1.8e-71 273.1 222 66.7
RcHm_v2.0_CPg0502851 Rosa chinensis HOM05D001750 ORTHO05D001825 3.1e-71 272.3 222 67.6
ATCG01010 Arabidopsis thaliana HOM05D001750 ORTHO05D001825 4.1e-71 271.9 222 68.5
SalBow1G5472 Salvia bowleyana HOM05D001750 ORTHO05D001825 4.1e-71 271.9 222 67.6
BraSC103t45424Z Brassica rapa HOM05D001750 ORTHO05D001825 2.0e-70 269.6 222 68.5
BraSC138t45539Z Brassica rapa HOM05D001750 ORTHO05D001825 2.0e-70 269.6 222 68.5
BraSC143t45665Z Brassica rapa HOM05D001750 ORTHO05D001825 2.0e-70 269.6 222 68.5
BraSC25t45905Z Brassica rapa HOM05D001750 ORTHO05D001825 2.0e-70 269.6 222 68.5
BraSC59t46546Z Brassica rapa HOM05D001750 ORTHO05D001825 2.0e-70 269.6 222 68.5
Nn064s42216 Nelumbo nucifera HOM05D001750 ORTHO05D001825 3.5e-70 268.9 222 68.0
BolSC29t60501H Brassica oleracea HOM05D001750 ORTHO05D001825 7.7e-70 267.7 222 68.5
BolSC37t60789H Brassica oleracea HOM05D001750 ORTHO05D001825 7.7e-70 267.7 222 68.5
BolSC44t60818H Brassica oleracea HOM05D001750 ORTHO05D001825 7.7e-70 267.7 222 68.5
BolSC45t60914H Brassica oleracea HOM05D001750 ORTHO05D001825 7.7e-70 267.7 222 68.5
BolSC46t60963H Brassica oleracea HOM05D001750 ORTHO05D001825 7.7e-70 267.7 222 68.5
PSO548G0117 Papaver somniferum HOM05D001750 ORTHO05D001825 1.1e-68 263.8 222 67.6
EL10As15g24136 Beta vulgaris HOM05D001750 ORTHO05D001825 1.9e-68 263.1 222 67.6
HanXRQChr08g0212841 Helianthus annuus HOM05D001750 ORTHO05D001825 5.7e-65 251.5 219 65.8
HanXRQChr01g0020101 Helianthus annuus HOM05D001750 ORTHO05D001825 3.8e-61 238.8 200 66.5
HanXRQChr00c0289g0573101 Helianthus annuus HOM05D001750 ORTHO05D001825 3.2e-60 235.7 221 63.3
MELO3C027417.2 Cucumis melo HOM05D001750 ORTHO05D001825 9.4e-60 234.2 173 73.4
Gohir.A04G039180 Gossypium hirsutum HOM05D001750 ORTHO05D001825 6.3e-56 221.5 178 69.1
Gohir.A12G229700 Gossypium hirsutum HOM05D001750 ORTHO05D001825 6.3e-56 221.5 178 69.1
AL7G50350 Arabidopsis lyrata HOM05D001750 ORTHO05D001825 1.1e-52 210.7 166 70.5
Hma1.2p1_0472F.1_g159730 Hydrangea macrophylla HOM05D001750 ORTHO05D001825 3.6e-51 205.7 171 66.1
Hma1.2p1_0066F.1_g036370 Hydrangea macrophylla HOM05D001750 ORTHO05D001825 3.7e-48 195.7 163 65.6
EL10As28g24255 Beta vulgaris HOM05D001750 ORTHO05D001825 1.1e-44 184.1 173 62.4
Potri.011G084150 Populus trichocarpa HOM05D001750 ORTHO05D001825 3.3e-44 182.6 193 57.5
Gohir.1Z049579 Gossypium hirsutum HOM05D001750 ORTHO05D001825 2.8e-43 179.5 143 70.6
PGSC0003DMG400029008 Solanum tuberosum HOM05D001750 ORTHO05D001825 8.9e-42 174.5 139 69.1
BolSC49t61137H Brassica oleracea HOM05D001750 ORTHO05D001825 3.4e-41 172.6 139 69.1
Gorai.005G127100 Gossypium raimondii HOM05D001750 ORTHO05D001825 5.7e-41 171.8 186 55.9
Solyc01g017090.2 Solanum lycopersicum HOM05D001750 ORTHO05D001825 1.7e-40 170.2 144 63.9
Thhalv10024000m.g Eutrema salsugineum HOM05D001750 ORTHO05D001825 2.2e-40 169.9 184 53.3
Nitab4.5_0007400g0030 Nicotiana tabacum HOM05D001750 ORTHO05D001825 1.8e-39 166.8 206 52.9
Gohir.1Z049402 Gossypium hirsutum HOM05D001750 ORTHO05D001825 3.9e-37 159.1 137 64.2
Oeu010691.1 Olea europaea HOM05D001750 ORTHO05D001825 5.6e-36 155.2 137 65.0
Gorai.006G035300 Gossypium raimondii HOM05D001750 ORTHO05D001825 4.0e-34 149.1 104 77.9
Psat5g142840 Pisum sativum HOM05D001750 ORTHO05D001825 6.8e-34 148.3 96 79.2
TPR.G28398 Trifolium pratense HOM05D001750 ORTHO05D001825 4.4e-33 145.6 96 78.1
Medtr8g059760 Medicago truncatula HOM05D001750 ORTHO05D011738 2.9e-32 142.9 93 78.5
Solyc03g013620.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 4.9e-32 142.1 99 74.7
Ciclev10013962m.g Citrus clementina HOM05D001750 ORTHO05D001825 2.4e-31 139.8 115 65.2
Ciclev10013986m.g Citrus clementina HOM05D001750 ORTHO05D001825 2.4e-31 139.8 115 65.2
Ciclev10014000m.g Citrus clementina HOM05D001750 ORTHO05D001825 2.4e-31 139.8 115 65.2
Ciclev10018422m.g Citrus clementina HOM05D001750 ORTHO05D001825 2.4e-31 139.8 115 65.2
Ciclev10027639m.g Citrus clementina HOM05D001750 ORTHO05D001825 2.4e-31 139.8 115 65.2
Ciclev10030454m.g Citrus clementina HOM05D001750 ORTHO05D001825 2.4e-31 139.8 115 65.2
Gorai.013G022800 Gossypium raimondii HOM05D001750 ORTHO05D001825 7.0e-31 138.3 129 62.8
BolC6t36205H Brassica oleracea HOM05D001750 ORTHO05D001825 6.0e-30 135.2 96 74.0
BolC6t36206H Brassica oleracea HOM05D001750 ORTHO05D001825 1.0e-29 134.4 99 73.7
PGSC0003DMG400020529 Solanum tuberosum HOM05D000729 ORTHO05D001063 2.3e-29 133.3 107 67.3
Gohir.D02G151844 Gossypium hirsutum HOM05D001750 ORTHO05D001825 3.0e-29 132.9 132 56.8
Hund04278 Selenicereus undatus HOM05D001750 ORTHO05D001825 3.9e-29 132.5 154 51.3
Eucgr.B00850 Eucalyptus grandis HOM05D001750 ORTHO05D001825 5.0e-29 132.1 218 44.0
Gohir.A07G167090 Gossypium hirsutum HOM05D001750 ORTHO05D001825 6.6e-29 131.7 95 71.6
Gohir.D02G112150 Gossypium hirsutum HOM05D001750 ORTHO05D001825 1.1e-28 131.0 219 41.6
SMO086G0048 Selaginella moellendorffii HOM05D001750 ORTHO05D001825 4.3e-28 129.0 218 42.7
Gorai.005G170400 Gossypium raimondii HOM05D001750 ORTHO05D001825 2.8e-27 126.3 129 55.8
HanXRQChr17g0557801 Helianthus annuus HOM05D001750 ORTHO05D001825 8.1e-27 124.8 221 41.2
Gohir.D09G044501 Gossypium hirsutum HOM05D001750 ORTHO05D001825 3.1e-26 122.9 95 67.4
Gorai.002G182500 Gossypium raimondii HOM05D001750 ORTHO05D001825 2.0e-25 120.2 96 68.8
Lalb_Chr07g0191711 Lupinus albus HOM05D001750 ORTHO05D001825 2.0e-25 120.2 72 88.9
Solyc11g021190.2 Solanum lycopersicum HOM05D001750 ORTHO05D001825 5.8e-25 118.6 159 49.1
Lalb_Chr07g0191701 Lupinus albus HOM05D001750 ORTHO05D001825 1.3e-21 107.5 101 63.4
GSVIVG01004972001 Vitis vinifera HOM05D001750 ORTHO05D001825 3.0e-21 106.3 86 68.6
Psat0s3763g0040 Pisum sativum HOM05D001750 ORTHO05D001825 6.6e-21 105.1 138 48.6
BolSC49t61138H Brassica oleracea HOM05D001750 ORTHO05D001825 7.3e-20 101.7 77 72.7
Gorai.008G266700 Gossypium raimondii HOM05D001750 ORTHO05D001825 7.3e-20 101.7 93 61.3
Thhalv10023164m.g Eutrema salsugineum HOM05D001750 ORTHO05D001825 3.6e-19 99.4 60 80.0
Manes.18G138200 Manihot esculenta HOM05D001750 ORTHO05D001825 6.8e-18 95.1 104 59.6
Gohir.D13G020450 Gossypium hirsutum HOM05D001750 ORTHO05D001825 8.9e-18 94.7 66 75.8
Zm00001eb384430 Zea mays HOM05D001750 ORTHO05D001825 2.0e-17 93.6 186 38.7
Zm00001eb384490 Zea mays HOM05D001750 ORTHO05D001825 2.0e-17 93.6 186 38.7
Zm00001eb384540 Zea mays HOM05D001750 ORTHO05D001825 2.0e-17 93.6 186 38.7
Zm00001eb437920 Zea mays HOM05D001750 ORTHO05D001825 2.0e-17 93.6 186 38.7
Zm00001eb438010 Zea mays HOM05D001750 ORTHO05D001825 2.0e-17 93.6 186 38.7
Zm00001eb439010 Zea mays HOM05D001750 ORTHO05D001825 2.0e-17 93.6 186 38.7
Zm00001eb440820 Zea mays HOM05D001750 ORTHO05D001825 2.0e-17 93.6 186 38.7
Zm00001eb442540 Zea mays HOM05D001750 ORTHO05D001825 2.0e-17 93.6 186 38.7
HanXRQChr00c0718g0577001 Helianthus annuus HOM05D001750 ORTHO05D001825 3.4e-17 92.8 56 80.4
Medtr0002s0200 Medicago truncatula HOM05D001750 ORTHO05D001825 1.3e-16 90.9 61 77.0
Ciclev10027648m.g Citrus clementina HOM05D001750 ORTHO05D001825 3.8e-16 89.4 69 65.2
ATMG00513 Arabidopsis thaliana HOM05D001750 ORTHO05D001825 4.9e-16 89.0 210 33.8
Solyc02g032320.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 4.9e-16 89.0 61 75.4
Migut.D01382 Erythranthe guttata HOM05D001750 ORTHO05D001825 1.1e-15 87.8 155 41.3
SHI48909 Sapria himalayana HOM05D001750 ORTHO05D001825 2.4e-15 86.7 198 36.4
FvH4_c1g00470 Fragaria vesca HOM05D001750 ORTHO05D001825 3.5e-14 82.8 191 35.6
Cpa.g.sc900.3 Carica papaya HOM05D001750 ORTHO05D001825 1.0e-13 81.3 197 34.0
Solyc00g500169.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 5.1e-13 79.0 180 36.1
TPR.G28320 Trifolium pratense HOM05D001750 ORTHO05D001825 6.6e-13 78.6 183 35.0
Aa31sc483G10 Aethionema arabicum HOM05D001750 ORTHO05D001825 1.1e-12 77.8 183 34.4
BolSC28t60420H Brassica oleracea HOM05D001750 ORTHO05D001825 1.1e-12 77.8 192 33.9
BraSC77t46633Z Brassica rapa HOM05D001750 ORTHO05D001825 1.1e-12 77.8 192 33.9
Lalb_Chr17g0337371 Lupinus albus HOM05D001750 ORTHO05D001825 1.1e-12 77.8 180 35.0
HanXRQMTg0579361 Helianthus annuus HOM05D001750 ORTHO05D001825 1.9e-12 77.0 210 32.4
Sp3g25940 Schrenkiella parvula HOM05D001750 ORTHO05D001825 2.5e-12 76.6 181 35.9
VMungo0329G0001 Vigna mungo HOM05D001750 ORTHO05D001825 2.5e-12 76.6 180 35.0
PSO017G5352 Papaver somniferum HOM05D001750 ORTHO05D001825 3.3e-12 76.3 194 34.0
Phvul.005G088400 Phaseolus vulgaris HOM05D001750 ORTHO05D001825 4.3e-12 75.9 180 35.0
Nitab4.5_0007104g0110 Nicotiana tabacum HOM05D001750 ORTHO05D001825 1.6e-11 73.9 113 46.0
GSVIVG01004101001 Vitis vinifera HOM05D000011 ORTHO05D002639 2.8e-11 73.2 82 53.7
Nn117s43413 Nelumbo nucifera HOM05D001750 ORTHO05D001825 6.2e-11 72.0 186 33.9
Psat0s6638g0080 Pisum sativum HOM05D001750 ORTHO05D001825 4.0e-10 69.3 115 41.7
Psat4g065280 Pisum sativum HOM05D001750 ORTHO05D001825 4.0e-10 69.3 115 41.7
Psat0s8829g0080 Pisum sativum HOM05D001750 ORTHO05D001825 1.2e-09 67.8 96 46.9
FAN14G4205 Fragaria x ananassa HOM05D001750 ORTHO05D001825 1.5e-09 67.4 149 34.9
Peaxi162Scf00451g00046 Petunia axillaris HOM05D001750 ORTHO05D001825 1.5e-09 67.4 138 35.5
Solyc00g500098.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 1.5e-09 67.4 138 35.5
Solyc00g500271.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 1.5e-09 67.4 138 35.5
Solyc00g500317.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 1.5e-09 67.4 138 35.5
Nn117s43418 Nelumbo nucifera HOM05D001750 ORTHO05D001825 2.0e-09 67.0 180 33.3
Nn1g10108 Nelumbo nucifera HOM05D001750 ORTHO05D001825 2.0e-09 67.0 180 33.3
Nn1g10189 Nelumbo nucifera HOM05D001750 ORTHO05D001825 2.0e-09 67.0 180 33.3
Nn1g10194 Nelumbo nucifera HOM05D001750 ORTHO05D001825 2.0e-09 67.0 180 33.3
unitig_91.g26524 Utricularia gibba HOM05D001750 ORTHO05D001825 2.0e-09 67.0 60 56.7
Nitab4.5_0000593g0200 Nicotiana tabacum HOM05D001750 ORTHO05D001825 2.6e-09 66.6 138 35.5
ECA039G0010 Erigeron canadensis HOM05D001750 ORTHO05D001825 3.4e-09 66.2 104 42.3
ECA041G0001 Erigeron canadensis HOM05D001750 ORTHO05D001825 3.4e-09 66.2 104 42.3
ECA234G2654 Erigeron canadensis HOM05D001750 ORTHO05D001825 3.4e-09 66.2 104 42.3
SEGI_04456 Sequoiadendron giganteum HOM05D001750 ORTHO05D001825 4.4e-09 65.9 202 32.7
unitig_87.g28030 Utricularia gibba HOM05D001750 ORTHO05D001825 4.4e-09 65.9 138 34.1
Peaxi162Scf00030g02118 Petunia axillaris HOM05D001200 ORTHO05D002731 7.6e-09 65.1 53 64.2
EL10As4g23402 Beta vulgaris HOM05D001750 ORTHO05D001825 1.3e-08 64.3 96 46.9
CAN.G8.25 Capsicum annuum HOM05D001750 ORTHO05D001825 1.7e-08 63.9 47 68.1
Migut.C00050 Erythranthe guttata HOM05D001750 ORTHO05D001825 1.7e-08 63.9 51 60.8
SEGI_05810 Sequoiadendron giganteum HOM05D001750 ORTHO05D001825 3.8e-08 62.8 193 33.7
unitig_736.g22737 Utricularia gibba HOM05D001750 ORTHO05D001825 3.8e-08 62.8 58 55.2
Lj2C1233T24 Lonicera japonica HOM05D001750 ORTHO05D001825 4.9e-08 62.4 138 34.1
Hund29041 Selenicereus undatus HOM05D001750 ORTHO05D001825 8.4e-08 61.6 139 35.3
Hund27557 Selenicereus undatus HOM05D001750 ORTHO05D007069 1.4e-07 60.8 104 39.4
Hund27692 Selenicereus undatus HOM05D001750 ORTHO05D001825 1.4e-07 60.8 104 39.4
Hund29121 Selenicereus undatus HOM05D001750 ORTHO05D001825 1.4e-07 60.8 104 39.4
BraSC48t46283Z Brassica rapa HOM05D001750 ORTHO05D001825 2.4e-07 60.1 128 34.4
Ah.10g027940 Amaranthus hybridus HOM05D001750 ORTHO05D001825 3.2e-07 59.7 104 39.4
Ah.10g028650 Amaranthus hybridus HOM05D001750 ORTHO05D001825 3.2e-07 59.7 104 39.4
Gorai.001G163400 Gossypium raimondii HOM05D001750 ORTHO05D001825 3.2e-07 59.7 160 30.6
MBI06_g25391_MAGBIO Magnolia biondii HOM05D001750 ORTHO05D001825 3.2e-07 59.7 180 32.2
CAN.G134.25 Capsicum annuum HOM05D001750 ORTHO05D001825 1.2e-06 57.8 103 37.9
Gorai.006G066100 Gossypium raimondii HOM05D001750 ORTHO05D001825 1.6e-06 57.4 58 56.9
FvH4_6g34420 Fragaria vesca HOM05D001750 ORTHO05D001825 2.1e-06 57.0 117 35.9
AUR62042331 Chenopodium quinoa HOM05D001750 ORTHO05D001825 7.8e-06 55.1 97 39.2


User provided reference genes

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