Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0388551 Lupinus albus HOM05D001200 ORTHO05D002731 1.8e-43 179.1 106 100.0
arahy.Tifrunner.gnm1.ann1.2QK9Z7 Arachis hypogaea HOM05D001200 ORTHO05D002731 2.1e-20 102.4 105 61.0
Medtr4g006120 Medicago truncatula HOM05D001200 ORTHO05D002731 3.1e-19 98.6 93 65.6
Medtr4g050950 Medicago truncatula HOM05D001200 ORTHO05D002731 3.1e-19 98.6 93 65.6
Nn064s42212 Nelumbo nucifera HOM05D001200 ORTHO05D002731 3.1e-19 98.6 76 73.7
RcHm_v2.0_Chr5g0043051 Rosa chinensis HOM05D001200 ORTHO05D002731 3.1e-19 98.6 76 73.7
RcHm_v2.0_Chr5g0017231 Rosa chinensis HOM05D001200 ORTHO05D002731 4.0e-19 98.2 76 72.4
EL10As15g24100 Beta vulgaris HOM05D001200 ORTHO05D002731 6.8e-19 97.4 76 72.4
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 6.8e-19 97.4 76 72.4
DCAR_032536 Daucus carota HOM05D001200 ORTHO05D002731 8.9e-19 97.1 76 71.1
Migut.D01384 Erythranthe guttata HOM05D001200 ORTHO05D002731 1.2e-18 96.7 97 58.8
Sed0012006 Sechium edule HOM05D001200 ORTHO05D002731 1.5e-18 96.3 76 72.4
Phvul.002G050301 Phaseolus vulgaris HOM05D001200 ORTHO05D002731 2.0e-18 95.9 76 72.4
Peaxi162Scf00030g02118 Petunia axillaris HOM05D001200 ORTHO05D002731 5.8e-18 94.4 76 69.7
Peaxi162Scf01164g00035 Petunia axillaris HOM05D001200 ORTHO05D002731 5.8e-18 94.4 76 69.7
Ciclev10013974m.g Citrus clementina HOM05D001200 ORTHO05D002731 7.5e-18 94.0 76 68.4
Ciclev10027631m.g Citrus clementina HOM05D001200 ORTHO05D002731 7.5e-18 94.0 76 68.4
Ciclev10027650m.g Citrus clementina HOM05D001200 ORTHO05D002731 7.5e-18 94.0 76 68.4
Gohir.1Z049731 Gossypium hirsutum HOM05D001200 ORTHO05D002731 9.8e-18 93.6 76 69.7
Gohir.A02G134201 Gossypium hirsutum HOM05D001200 ORTHO05D010401 9.8e-18 93.6 76 69.7
Lalb_Chr07g0191751 Lupinus albus HOM05D001200 ORTHO05D002731 1.3e-17 93.2 61 100.0
MD04G1189100 Malus domestica HOM05D001200 ORTHO05D002731 1.7e-17 92.8 76 72.4
Lj2P1238T97 Lonicera japonica HOM05D001200 ORTHO05D002731 2.9e-17 92.0 76 68.4
SalBow1G7634 Salvia bowleyana HOM05D001200 ORTHO05D002731 2.9e-17 92.0 76 67.1
PGSC0003DMG400020539 Solanum tuberosum HOM05D001200 ORTHO05D002731 3.7e-17 91.7 76 67.1
PGSC0003DMG401011339 Solanum tuberosum HOM05D001200 ORTHO05D002731 3.7e-17 91.7 76 67.1
HanXRQChr00c0196g0572481 Helianthus annuus HOM05D001200 ORTHO05D002731 6.4e-17 90.9 76 69.7
HanXRQChr00c0690g0576761 Helianthus annuus HOM05D001200 ORTHO05D002731 6.4e-17 90.9 76 69.7
HanXRQChr02g0059711 Helianthus annuus HOM05D001200 ORTHO05D002731 6.4e-17 90.9 76 69.7
HanXRQChr03g0073091 Helianthus annuus HOM05D001200 ORTHO05D002731 6.4e-17 90.9 76 69.7
HanXRQChr05g0152431 Helianthus annuus HOM05D001200 ORTHO05D002731 6.4e-17 90.9 76 69.7
HanXRQChr06g0183001 Helianthus annuus HOM05D001200 ORTHO05D002731 6.4e-17 90.9 76 69.7
HanXRQChr09g0258521 Helianthus annuus HOM05D001200 ORTHO05D002731 6.4e-17 90.9 76 69.7
HanXRQChr11g0323741 Helianthus annuus HOM05D001200 ORTHO05D002731 6.4e-17 90.9 76 69.7
HanXRQCPg0580351 Helianthus annuus HOM05D001200 ORTHO05D002731 6.4e-17 90.9 76 69.7
Gohir.A01G143400 Gossypium hirsutum HOM05D001200 ORTHO05D002731 8.3e-17 90.5 76 68.4
Medtr0002s0170 Medicago truncatula HOM05D001200 ORTHO05D002731 8.3e-17 90.5 76 67.1
Gorai.006G071400 Gossypium raimondii HOM05D001200 ORTHO05D002731 1.4e-16 89.7 76 67.1
BcaC03g16699 Brassica carinata HOM05D001200 ORTHO05D002731 3.2e-16 88.6 76 67.1
C09p24620 Brassica napus HOM05D001200 ORTHO05D002731 3.2e-16 88.6 76 67.1
BolC2t10611H Brassica oleracea HOM05D001200 ORTHO05D002731 3.2e-16 88.6 76 67.1
BolSC29t60504H Brassica oleracea HOM05D001200 ORTHO05D002731 3.2e-16 88.6 76 67.1
BolSC35t60702H Brassica oleracea HOM05D001200 ORTHO05D002731 3.2e-16 88.6 76 67.1
BolSC37t60791H Brassica oleracea HOM05D001200 ORTHO05D002731 3.2e-16 88.6 76 67.1
BraSC179t45776Z Brassica rapa HOM05D001200 ORTHO05D002731 3.2e-16 88.6 76 67.1
BraSC59t46549Z Brassica rapa HOM05D001200 ORTHO05D002731 3.2e-16 88.6 76 67.1
TPR.G24765 Trifolium pratense HOM05D001200 ORTHO05D002731 3.2e-16 88.6 71 69.0
C09p40370 Brassica napus HOM05D001200 ORTHO05D002731 4.1e-16 88.2 95 57.9
CARHR282420 Cardamine hirsuta HOM05D001200 ORTHO05D002731 5.4e-16 87.8 93 59.1
Solyc11g021213.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 7.1e-16 87.4 74 66.2
Nitab4.5_0001342g0130 Nicotiana tabacum HOM05D001200 ORTHO05D002731 3.5e-15 85.1 76 72.4
SEGI_13011 Sequoiadendron giganteum HOM05D001200 ORTHO05D002731 1.7e-14 82.8 70 65.7
HanXRQChr01g0020071 Helianthus annuus HOM05D001200 ORTHO05D002731 1.1e-13 80.1 92 57.6
Medtr7g021720 Medicago truncatula HOM05D001200 ORTHO05D002731 2.5e-13 79.0 93 66.7
HanXRQChr08g0211981 Helianthus annuus HOM05D001200 ORTHO05D002731 1.6e-12 76.3 56 78.6
Solyc01g065620.1 Solanum lycopersicum HOM05D001200 ORTHO05D010401 3.6e-12 75.1 76 56.6
Medtr4g128700 Medicago truncatula HOM05D001200 ORTHO05D002731 9.9e-10 67.0 51 70.6
HanXRQChr00c0894g0577811 Helianthus annuus HOM05D001200 ORTHO05D002731 2.2e-09 65.9 72 62.5
Medtr7g044990 Medicago truncatula HOM05D001200 ORTHO05D002731 2.2e-09 65.9 50 70.0
Medtr2g042860 Medicago truncatula HOM05D001200 ORTHO05D002731 6.4e-09 64.3 51 68.6
Medtr5g464700 Medicago truncatula HOM05D001200 ORTHO05D002731 6.4e-09 64.3 51 66.7
Medtr8g056200 Medicago truncatula HOM05D001200 ORTHO05D002731 6.4e-09 64.3 51 66.7
Medtr3g109440 Medicago truncatula HOM05D001200 ORTHO05D002731 1.1e-08 63.5 51 64.7
Medtr4g080900 Medicago truncatula HOM05D001200 ORTHO05D002731 1.4e-08 63.2 51 66.7
Solyc01g065585.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 1.4e-08 63.2 74 51.4
HanXRQChr17g0557771 Helianthus annuus HOM05D001200 ORTHO05D002731 2.4e-08 62.4 49 69.4
C06p42250 Brassica napus HOM05D001200 ORTHO05D002731 4.1e-08 61.6 49 63.3
Medtr3g098750 Medicago truncatula HOM05D003236 ORTHO05D003620 4.1e-08 61.6 78 55.1
Medtr1g040655 Medicago truncatula HOM05D001200 ORTHO05D002731 7.1e-08 60.8 52 67.3
Medtr5g089040 Medicago truncatula HOM05D001200 ORTHO05D002731 2.1e-07 59.3 51 64.7
Gohir.A13G109925 Gossypium hirsutum HOM05D001200 ORTHO05D002731 3.5e-07 58.5 46 63.0
Medtr2g048620 Medicago truncatula HOM05D001200 ORTHO05D002731 1.3e-06 56.6 51 62.7
Medtr5g099080 Medicago truncatula HOM05D001200 ORTHO05D002731 1.3e-06 56.6 51 62.7
HanXRQChr07g0204721 Helianthus annuus HOM05D001200 ORTHO05D002731 2.3e-06 55.8 55 54.5
Solyc01g065610.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 3.0e-06 55.5 54 55.6
HanXRQChr00c0328g0573601 Helianthus annuus HOM05D001200 ORTHO05D002731 5.1e-06 54.7 42 66.7


User provided reference genes

Program Settings