Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0387681 Lupinus albus HOM05D006041 ORTHO05D007473 4.8e-152 541.2 285 100.0
Lalb_Chr05g0222281 Lupinus albus HOM05D006041 ORTHO05D007473 3.2e-95 352.4 315 66.3
Haze_10912 Corylus avellana HOM05D006041 ORTHO05D007473 1.9e-63 246.9 317 50.8
Haze_10913 Corylus avellana HOM05D006041 ORTHO05D007473 1.9e-63 246.9 317 50.8
Lj4g0006027 Lotus japonicus HOM05D006041 ORTHO05D007473 8.7e-61 238.0 311 50.2
Cfa015002 Carpinus fangiana HOM05D006041 ORTHO05D007473 1.9e-60 236.9 317 48.9
QL03p034952 Quercus lobata HOM05D006041 ORTHO05D007473 1.9e-60 236.9 321 49.8
Medtr8g104930 Medicago truncatula HOM05D006041 ORTHO05D007473 5.3e-58 228.8 310 48.1
Glyma.08G042900 Glycine max HOM05D006041 ORTHO05D007473 9.0e-58 228.0 311 49.2
Dinv26256 Davidia involucrata HOM05D006041 ORTHO05D007473 2.0e-57 226.9 317 47.9
Phvul.002G319700 Phaseolus vulgaris HOM05D006041 ORTHO05D007473 2.6e-57 226.5 320 49.7
Cpa.g.c27573.2 Carica papaya HOM05D006041 ORTHO05D007473 1.3e-56 224.2 321 45.5
ClCG01G006460 Citrullus lanatus HOM05D006041 ORTHO05D007473 1.3e-56 224.2 307 46.3
VMungo0251G2799 Vigna mungo HOM05D006041 ORTHO05D007473 1.3e-56 224.2 314 49.4
Glyma.05G235400 Glycine max HOM05D006041 ORTHO05D007473 1.9e-55 220.3 314 48.7
Ca_17289_v3 Cicer arietinum L. HOM05D006041 ORTHO05D007473 3.2e-55 219.5 308 47.4
CiPaw.05G190300 Carya illinoinensis HOM05D006041 ORTHO05D007473 7.1e-55 218.4 319 45.8
RcHm_v2.0_Chr4g0443331 Rosa chinensis HOM05D006041 ORTHO05D007473 1.2e-54 217.6 320 45.0
arahy.Tifrunner.gnm1.ann1.BAL5EB Arachis hypogaea HOM05D006041 ORTHO05D007473 1.6e-54 217.2 310 48.1
Dinv18641 Davidia involucrata HOM05D006041 ORTHO05D007473 2.3e-53 213.4 351 43.0
Eucgr.G02114 Eucalyptus grandis HOM05D006041 ORTHO05D007473 2.3e-53 213.4 319 42.9
MELO3C005281.2 Cucumis melo HOM05D006041 ORTHO05D007473 3.0e-53 213.0 311 46.3
arahy.Tifrunner.gnm1.ann1.IVEQ23 Arachis hypogaea HOM05D006041 ORTHO05D007473 3.9e-53 212.6 308 46.8
Hma1.2p1_0089F.1_g045430 Hydrangea macrophylla HOM05D006041 ORTHO05D007473 3.9e-53 212.6 315 46.0
TAR629G0174 Trochodendron aralioides HOM05D006041 ORTHO05D007473 6.7e-53 211.8 313 47.0
Psat7g009240 Pisum sativum HOM05D006041 ORTHO05D007473 2.5e-52 209.9 322 45.0
CsaV3_5G028000 Cucumis sativus L. HOM05D006041 ORTHO05D007473 3.3e-52 209.5 311 45.3
PGR142G4228 Punica granatum HOM05D006041 ORTHO05D007473 3.7e-51 206.1 320 43.1
COL.COLO4_16567 Corchorus olitorius HOM05D006041 ORTHO05D007473 1.4e-50 204.1 317 44.2
Gorai.005G158800 Gossypium raimondii HOM05D006041 ORTHO05D007473 5.3e-50 202.2 319 42.6
Rhsim09G0037900 Rhododendron simsii HOM05D006041 ORTHO05D007473 5.3e-50 202.2 279 48.4
Lj6A740T67 Lonicera japonica HOM05D006041 ORTHO05D007473 9.0e-50 201.4 314 42.0
vmacro00556 Vaccinium macrocarpon HOM05D006041 ORTHO05D007473 9.0e-50 201.4 314 44.9
Nn4g24305 Nelumbo nucifera HOM05D006041 ORTHO05D007473 1.2e-49 201.1 321 45.2
Oeu016281.1 Olea europaea HOM05D006041 ORTHO05D007473 3.4e-49 199.5 317 41.6
TWI74G1002 Tripterygium wilfordii HOM05D006041 ORTHO05D007473 1.0e-48 198.0 322 42.5
CSS0021041 Camellia sinensis var. sinensis HOM05D006041 ORTHO05D007473 2.2e-48 196.8 323 42.7
CSS0021655 Camellia sinensis var. sinensis HOM05D006041 ORTHO05D007473 2.2e-48 196.8 323 42.7
Thecc.02G290600 Theobroma cacao HOM05D006041 ORTHO05D007473 2.9e-48 196.4 325 41.2
Actinidia34032 Actinidia chinensis HOM05D006041 ORTHO05D007473 1.4e-47 194.1 281 47.7
Manes.15G133200 Manihot esculenta HOM05D006041 ORTHO05D007473 1.4e-47 194.1 314 43.0
Gohir.D02G141500 Gossypium hirsutum HOM05D006041 ORTHO05D007473 2.5e-47 193.4 321 41.1
TAR371G0590 Trochodendron aralioides HOM05D006041 ORTHO05D007473 3.2e-47 193.0 324 42.9
FAN12G3784 Fragaria x ananassa HOM05D006041 ORTHO05D007473 1.6e-46 190.7 298 44.6
Sabra08G0102300 Salix brachista HOM05D006041 ORTHO05D007473 1.6e-46 190.7 335 44.2
Atru.chr11.510 Acer truncatum HOM05D006041 ORTHO05D007473 2.1e-46 190.3 323 41.8
FAN17G0347 Fragaria x ananassa HOM05D006041 ORTHO05D007473 2.7e-46 189.9 294 45.2
TPR.G32714 Trifolium pratense HOM05D006041 ORTHO05D007473 2.7e-46 189.9 315 42.2
Oeu063578.1 Olea europaea HOM05D006041 ORTHO05D007473 3.5e-46 189.5 319 42.6
Lsat_1_v5_gn_8_45641 Lactuca sativa HOM05D006041 ORTHO05D007473 6.0e-46 188.7 310 41.0
FAN22G1094 Fragaria x ananassa HOM05D006041 ORTHO05D007473 1.0e-45 188.0 294 45.6
Duzib268G1057 Durio zibethinus HOM05D006041 ORTHO05D007473 1.8e-45 187.2 324 40.1
FvH4_4g33820 Fragaria vesca HOM05D006041 ORTHO05D007473 2.3e-45 186.8 300 44.3
Manes.17G082400 Manihot esculenta HOM05D006041 ORTHO05D007473 3.9e-45 186.0 305 41.3
MD13G1029800 Malus domestica HOM05D006041 ORTHO05D007473 1.5e-44 184.1 332 39.8
Duzib251G0740 Durio zibethinus HOM05D006041 ORTHO05D007473 1.9e-44 183.7 317 40.4
Prupe.1G331600 Prunus persica HOM05D006041 ORTHO05D007473 2.5e-44 183.3 321 41.7
SalBow2G0340 Salvia bowleyana HOM05D006041 ORTHO05D007473 5.7e-44 182.2 304 42.4
HanXRQChr08g0212441 Helianthus annuus HOM05D006041 ORTHO05D007473 9.7e-44 181.4 316 40.5
PGSC0003DMG400032118 Solanum tuberosum HOM05D006041 ORTHO05D007473 9.7e-44 181.4 312 42.0
THA.LOC104805081 Tarenaya hassleriana HOM05D006041 ORTHO05D007473 2.2e-43 180.3 326 39.9
Solyc01g005430.3 Solanum lycopersicum HOM05D006041 ORTHO05D007473 2.8e-43 179.9 306 41.8
Ciclev10015068m.g Citrus clementina HOM05D006041 ORTHO05D007473 4.8e-43 179.1 335 39.7
Potri.008G133700 Populus trichocarpa HOM05D006041 ORTHO05D007473 6.3e-43 178.7 332 41.6
Cc11_g08020 Coffea canephora HOM05D006041 ORTHO05D007473 8.2e-43 178.3 326 39.9
Nitab4.5_0000238g0060 Nicotiana tabacum HOM05D006041 ORTHO05D007473 1.4e-42 177.6 309 41.1
Sopen01g001440 Solanum pennellii HOM05D006041 ORTHO05D007473 1.8e-42 177.2 305 41.3
Gohir.A03G117900 Gossypium hirsutum HOM05D006041 ORTHO05D007473 3.1e-42 176.4 324 40.1
ECA233G3443 Erigeron canadensis HOM05D006041 ORTHO05D007473 4.1e-42 176.0 325 39.1
Aa31LG2G8250 Aethionema arabicum HOM05D006041 ORTHO05D007473 5.3e-42 175.6 314 41.1
Carub.0005s0060 Capsella rubella HOM05D006041 ORTHO05D007473 5.3e-42 175.6 322 40.1
Gohir.A01G147900 Gossypium hirsutum HOM05D006041 ORTHO05D007473 6.9e-42 175.3 320 38.4
MD16G1020600 Malus domestica HOM05D006041 ORTHO05D007473 9.0e-42 174.9 332 40.1
Nitab4.5_0009602g0010 Nicotiana tabacum HOM05D006041 ORTHO05D007473 1.5e-41 174.1 314 42.4
MBI19_g21093_MAGBIO Magnolia biondii HOM05D006041 ORTHO05D007473 1.0e-40 171.4 311 39.5
Migut.E00465 Erythranthe guttata HOM05D006041 ORTHO05D007473 2.2e-40 170.2 314 39.8
BcaC06g34139 Brassica carinata HOM05D006041 ORTHO05D007473 2.9e-40 169.9 321 37.4
Sc03g0001760 Simmondsia chinensis HOM05D006041 ORTHO05D007473 2.9e-40 169.9 336 38.4
Thhalv10004151m.g Eutrema salsugineum HOM05D006041 ORTHO05D007473 5.0e-40 169.1 320 38.1
BolC7t43765H Brassica oleracea HOM05D006041 ORTHO05D007473 6.5e-40 168.7 321 37.1
SGA_v2.0_scaffold139G35400 Striga asiatica HOM05D006041 ORTHO05D007473 6.5e-40 168.7 313 37.4
C07p32270 Brassica napus HOM05D006041 ORTHO05D007473 1.9e-39 167.2 315 37.8
Sed0013468 Sechium edule HOM05D006041 ORTHO05D007473 3.2e-39 166.4 240 42.5
DCAR_007323 Daucus carota HOM05D006041 ORTHO05D007473 9.4e-39 164.9 328 38.4
AL5G10750 Arabidopsis lyrata HOM05D006041 ORTHO05D007473 1.2e-38 164.5 322 39.1
Peaxi162Scf00655g00023 Petunia axillaris HOM05D006041 ORTHO05D007473 3.6e-38 162.9 280 40.0
EL10Ac6g15713 Beta vulgaris HOM05D006041 ORTHO05D007473 7.9e-38 161.8 365 35.3
AUR62003915 Chenopodium quinoa HOM05D006041 ORTHO05D007473 1.0e-37 161.4 343 35.6
AT2G01650 Arabidopsis thaliana HOM05D006041 ORTHO05D007473 3.0e-37 159.8 318 37.7
BcaC06g31287 Brassica carinata HOM05D006041 ORTHO05D007473 5.1e-37 159.1 317 37.9
CAN.G1130.10 Capsicum annuum HOM05D006041 ORTHO05D007473 6.7e-37 158.7 364 35.7
MSTRG.2140 Avicennia marina HOM05D006041 ORTHO05D007473 2.0e-36 157.1 306 36.6
Sp2g13100 Schrenkiella parvula HOM05D006041 ORTHO05D007473 5.7e-36 155.6 318 37.1
BraA06t27296Z Brassica rapa HOM05D006041 ORTHO05D007473 1.7e-35 154.1 313 36.4
Gorai.002G173400 Gossypium raimondii HOM05D006041 ORTHO05D007473 3.7e-35 152.9 317 34.4
PSO478G4621 Papaver somniferum HOM05D006041 ORTHO05D007473 4.8e-35 152.5 315 40.0
PSO017G0247 Papaver somniferum HOM05D006041 ORTHO05D007473 1.4e-34 151.0 315 40.0
CARHR144220 Cardamine hirsuta HOM05D006041 ORTHO05D007473 3.1e-34 149.8 320 37.8
Gohir.D01G141100 Gossypium hirsutum HOM05D006041 ORTHO05D007473 5.3e-34 149.1 317 33.8
A06p44210 Brassica napus HOM05D006041 ORTHO05D007473 6.9e-34 148.7 306 36.9
Ah.03g145700 Amaranthus hybridus HOM05D006041 ORTHO05D007473 1.5e-33 147.5 339 33.9
SEGI_21307 Sequoiadendron giganteum HOM05D006041 ORTHO05D007473 3.4e-33 146.4 307 35.5
AUR62038228 Chenopodium quinoa HOM05D006041 ORTHO05D007473 1.3e-32 144.4 266 37.6
ATR0753G012 Amborella trichopoda HOM05D006041 ORTHO05D007473 2.5e-31 140.2 315 37.5
CANSAT01G0691 Cannabis sativa HOM05D006041 ORTHO05D007473 2.5e-31 140.2 322 35.1
Sed0015632 Sechium edule HOM05D006041 ORTHO05D007473 4.2e-31 139.4 332 34.9
CDE07G0862 Ceratophyllum demersum HOM05D006041 ORTHO05D007473 9.4e-31 138.3 308 36.0
unitig_27.g25310 Utricularia gibba HOM05D006041 ORTHO05D007473 1.8e-29 134.0 315 33.3
SGA_v2.0_scaffold151G36758 Striga asiatica HOM05D006041 ORTHO05D007473 1.7e-27 127.5 224 40.2
CDE06G1197 Ceratophyllum demersum HOM05D006041 ORTHO05D007473 5.9e-25 119.0 297 35.4
SGA_v2.0_scaffold151G36726 Striga asiatica HOM05D006041 ORTHO05D007473 2.7e-22 110.2 255 34.9
QL10p059701 Quercus lobata HOM05D006041 ORTHO05D007473 1.8e-21 107.5 158 45.6
Aqoxy3G00037 Aquilegia oxysepala HOM05D006041 ORTHO05D007473 9.1e-18 95.1 288 34.7
arahy.Tifrunner.gnm1.ann1.I8TFGP Arachis hypogaea HOM05D006041 ORTHO05D007473 5.9e-17 92.4 102 48.0
Psat7g181280 Pisum sativum HOM05D006041 ORTHO05D007473 4.2e-15 86.3 172 36.0
Zm00001eb099250 Zea mays HOM05D006041 ORTHO05D007473 4.7e-14 82.8 293 30.7
CAN.G3.6 Capsicum annuum HOM05D006041 ORTHO05D007473 3.7e-11 73.2 99 42.4
Zm00001eb312180 Zea mays HOM05D006041 ORTHO05D007473 3.1e-10 70.1 290 28.3
Aqoxy4G01147 Aquilegia oxysepala HOM05D006041 ORTHO05D007473 3.8e-08 63.2 89 55.1
CBR_g3474 Chara braunii HOM05D006041 ORTHO05D007473 1.5e-07 61.2 82 40.2
Actinidia25876 Actinidia chinensis HOM05D001822 ORTHO05D001744 4.7e-06 56.2 110 36.4


User provided reference genes

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