Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0386581 Lupinus albus HOM05D002756 ORTHO05D002896 3.2e-105 385.2 208 100.0
Lalb_Chr05g0221081 Lupinus albus HOM05D002756 ORTHO05D002896 4.4e-78 295.0 208 76.9
Lalb_Chr09g0329931 Lupinus albus HOM05D002756 ORTHO05D002896 3.5e-75 285.4 199 78.9
Lj4g0006676 Lotus japonicus HOM05D002756 ORTHO05D002896 7.8e-27 124.8 235 47.7
Prupe.5G064100 Prunus persica HOM05D002756 ORTHO05D002896 3.6e-24 115.9 227 40.5
MD04G1061300 Malus domestica HOM05D002756 ORTHO05D002896 5.8e-22 108.6 217 41.0
RcHm_v2.0_Chr7g0204301 Rosa chinensis HOM05D002756 ORTHO05D002896 1.7e-18 97.1 219 37.4
Duzib068G0659 Durio zibethinus HOM05D002756 ORTHO05D002896 2.3e-18 96.7 222 39.2
FAN08G2407 Fragaria x ananassa HOM05D002756 ORTHO05D002896 3.0e-18 96.3 219 37.0
FvH4_5g19610 Fragaria vesca HOM05D002756 ORTHO05D002896 5.1e-18 95.5 219 37.0
FAN13G0091 Fragaria x ananassa HOM05D002756 ORTHO05D002896 8.7e-18 94.7 217 36.9
FAN04G0448 Fragaria x ananassa HOM05D002756 ORTHO05D002896 1.5e-17 94.0 219 37.0
Duzib205G1850 Durio zibethinus HOM05D002756 ORTHO05D002896 1.9e-17 93.6 195 41.0
FAN18G1828 Fragaria x ananassa HOM05D002756 ORTHO05D002896 3.3e-17 92.8 219 36.5
PGR042G1682 Punica granatum HOM05D002756 ORTHO05D002896 3.3e-17 92.8 188 41.5
EL10Ac5g12331 Beta vulgaris HOM05D002756 ORTHO05D002896 2.8e-16 89.7 232 37.5
AUR62007124 Chenopodium quinoa HOM05D002756 ORTHO05D002896 3.6e-16 89.4 200 40.0
Duzib084G0904 Durio zibethinus HOM05D002756 ORTHO05D002896 3.6e-16 89.4 226 38.5
QL12p010923 Quercus lobata HOM05D002756 ORTHO05D002896 3.6e-16 89.4 233 37.8
QL12p011144 Quercus lobata HOM05D002756 ORTHO05D002896 3.6e-16 89.4 233 37.8
Thecc.03G246800 Theobroma cacao HOM05D002756 ORTHO05D002896 8.1e-16 88.2 196 41.3
Ah.12g054420 Amaranthus hybridus HOM05D002756 ORTHO05D002896 1.8e-15 87.0 227 38.8
Eucgr.E00399 Eucalyptus grandis HOM05D002756 ORTHO05D002896 2.4e-15 86.7 205 37.6
AUR62019993 Chenopodium quinoa HOM05D002756 ORTHO05D002896 6.9e-15 85.1 177 42.9
CANSAT21G1520 Cannabis sativa HOM05D002756 ORTHO05D002896 1.2e-14 84.3 98 54.1
CiPaw.11G082800 Carya illinoinensis HOM05D002756 ORTHO05D002896 1.5e-14 84.0 208 39.4
COL.COLO4_37105 Corchorus olitorius HOM05D002756 ORTHO05D002896 2.6e-14 83.2 189 41.3
TPR.G37630 Trifolium pratense HOM05D002756 ORTHO05D002896 2.6e-14 83.2 140 53.6
MD06G1054900 Malus domestica HOM05D002756 ORTHO05D002896 3.4e-14 82.8 171 40.9
CiPaw.12G049400 Carya illinoinensis HOM05D002756 ORTHO05D002896 4.5e-14 82.4 187 41.7
Medtr4g100530 Medicago truncatula HOM05D002756 ORTHO05D002896 2.9e-13 79.7 103 55.3
Ciclev10019703m.g Citrus clementina HOM05D002756 ORTHO05D002896 6.4e-13 78.6 211 37.4
Glyma.17G144800 Glycine max HOM05D002756 ORTHO05D002896 1.9e-12 77.0 218 39.9
VMungo0251G0835 Vigna mungo HOM05D002756 ORTHO05D002896 1.9e-12 77.0 225 38.2
Sabra03G0049800 Salix brachista HOM05D002756 ORTHO05D002896 2.4e-12 76.6 231 35.1
Glyma.05G062801 Glycine max HOM05D002756 ORTHO05D002896 1.2e-11 74.3 216 37.5
Phvul.003G223300 Phaseolus vulgaris HOM05D002756 ORTHO05D002896 1.6e-11 73.9 217 36.4
Sc07g0009180 Simmondsia chinensis HOM05D002756 ORTHO05D002896 1.6e-11 73.9 188 40.4
Cfa012698 Carpinus fangiana HOM05D002756 ORTHO05D002896 2.1e-11 73.6 96 54.2
ClCG10G002500 Citrullus lanatus HOM05D002756 ORTHO05D002896 7.9e-11 71.6 214 33.2
PSO732G0525 Papaver somniferum HOM05D002756 ORTHO05D002896 7.9e-11 71.6 209 32.5
TAR629G2869 Trochodendron aralioides HOM05D002756 ORTHO05D002896 7.9e-11 71.6 217 35.9
Atru.chr9.1260 Acer truncatum HOM05D002756 ORTHO05D002896 1.3e-10 70.9 214 36.0
Psat4g073480 Pisum sativum HOM05D002756 ORTHO05D002896 1.3e-10 70.9 102 52.0
CSS0004447 Camellia sinensis var. sinensis HOM05D002756 ORTHO05D002896 1.8e-10 70.5 205 36.6
MELO3C013922.2 Cucumis melo HOM05D002756 ORTHO05D002896 1.8e-10 70.5 223 32.7
Nitab4.5_0002601g0020 Nicotiana tabacum HOM05D002756 ORTHO05D002896 1.8e-10 70.5 100 53.0
TWI81G0105 Tripterygium wilfordii HOM05D002756 ORTHO05D002896 1.8e-10 70.5 140 42.9
CsaV3_3G002530 Cucumis sativus L. HOM05D002756 ORTHO05D002896 3.0e-10 69.7 219 32.4
Nitab4.5_0007283g0010 Nicotiana tabacum HOM05D002756 ORTHO05D002896 3.9e-10 69.3 100 52.0
Gohir.A03G006140 Gossypium hirsutum HOM05D002756 ORTHO05D002896 5.1e-10 68.9 87 55.2
Potri.001G155000 Populus trichocarpa HOM05D002756 ORTHO05D002896 5.1e-10 68.9 212 34.9
Sed0017596 Sechium edule HOM05D002756 ORTHO05D002896 5.1e-10 68.9 212 32.5
Sopen08g026790 Solanum pennellii HOM05D002756 ORTHO05D002896 5.1e-10 68.9 100 51.0
AL7G37860 Arabidopsis lyrata HOM05D002756 ORTHO05D002896 6.7e-10 68.6 126 45.2
Gohir.D03G166200 Gossypium hirsutum HOM05D002756 ORTHO05D002896 1.5e-09 67.4 85 55.3
Manes.02G041900 Manihot esculenta HOM05D002756 ORTHO05D002896 2.5e-09 66.6 223 32.3
PGSC0003DMG400026237 Solanum tuberosum HOM05D002756 ORTHO05D002896 2.5e-09 66.6 200 36.0
Haze_07935 Corylus avellana HOM05D002756 ORTHO05D002896 4.3e-09 65.9 95 51.6
AT4G16790 Arabidopsis thaliana HOM05D002756 ORTHO05D002896 5.6e-09 65.5 125 44.8
Hma1.2p1_1196F.1_g266030 Hydrangea macrophylla HOM05D002756 ORTHO05D002896 5.6e-09 65.5 170 35.3
Hma1.2p1_1335F.1_g276370 Hydrangea macrophylla HOM05D002756 ORTHO05D002896 5.6e-09 65.5 170 35.3
TAR629G0742 Trochodendron aralioides HOM05D002756 ORTHO05D002896 7.4e-09 65.1 225 34.7
Cpa.g.sc89.63 Carica papaya HOM05D002756 ORTHO05D002896 9.6e-09 64.7 108 48.1
Gorai.003G175800 Gossypium raimondii HOM05D002756 ORTHO05D002896 9.6e-09 64.7 63 63.5
Aa31LG2G12970 Aethionema arabicum HOM05D002756 ORTHO05D002896 1.3e-08 64.3 90 47.8
CAN.G1178.4 Capsicum annuum HOM05D002756 ORTHO05D002896 1.3e-08 64.3 129 43.4
Gorai.003G175700 Gossypium raimondii HOM05D002756 ORTHO05D002896 1.3e-08 64.3 85 55.3
CAN.G62.18 Capsicum annuum HOM05D002756 ORTHO05D002896 1.6e-08 63.9 150 41.3
arahy.Tifrunner.gnm1.ann1.X9KLSS Arachis hypogaea HOM05D002756 ORTHO05D002896 2.1e-08 63.5 187 38.0
Ca_21993_v3 Cicer arietinum L. HOM05D002756 ORTHO05D002896 2.1e-08 63.5 202 36.6
Glyma.19G105000 Glycine max HOM05D002756 ORTHO05D002896 2.1e-08 63.5 216 36.6
Solyc08g078290.1 Solanum lycopersicum HOM05D002756 ORTHO05D002896 2.1e-08 63.5 183 37.7
Dinv39178 Davidia involucrata HOM05D002756 ORTHO05D002896 2.8e-08 63.2 195 34.9
Nitab4.5_0000618g0140 Nicotiana tabacum HOM05D002756 ORTHO05D002896 2.8e-08 63.2 165 38.2
Nn6g33844 Nelumbo nucifera HOM05D002756 ORTHO05D002896 3.7e-08 62.8 215 34.4
Sp7g17320 Schrenkiella parvula HOM05D002756 ORTHO05D002896 3.7e-08 62.8 39 87.2
THA.LOC104807911 Tarenaya hassleriana HOM05D002756 ORTHO05D002896 3.7e-08 62.8 154 38.3
Migut.A01149 Erythranthe guttata HOM05D002756 ORTHO05D002896 4.8e-08 62.4 145 37.9
Rhsim11G0050900 Rhododendron simsii HOM05D002756 ORTHO05D002896 4.8e-08 62.4 192 34.4
vmacro00014 Vaccinium macrocarpon HOM05D002756 ORTHO05D002896 4.8e-08 62.4 93 48.4
BcaB04g18397 Brassica carinata HOM05D002756 ORTHO05D002896 6.2e-08 62.0 39 87.2
CARHR223410 Cardamine hirsuta HOM05D002756 ORTHO05D002896 6.2e-08 62.0 41 80.5
Nn6g33847 Nelumbo nucifera HOM05D002756 ORTHO05D002896 6.2e-08 62.0 214 32.7
Cc08_g12030 Coffea canephora HOM05D002756 ORTHO05D002896 8.1e-08 61.6 99 47.5
BraA08t33260Z Brassica rapa HOM05D002756 ORTHO05D002896 1.4e-07 60.8 80 52.5
Gohir.D12G217500 Gossypium hirsutum HOM05D002756 ORTHO05D002896 1.4e-07 60.8 130 41.5
Peaxi162Scf00346g00062 Petunia axillaris HOM05D002756 ORTHO05D002896 1.4e-07 60.8 147 38.8
Actinidia14397 Actinidia chinensis HOM05D002756 ORTHO05D002896 1.8e-07 60.5 72 54.2
BcaC07g38020 Brassica carinata HOM05D002756 ORTHO05D002896 1.8e-07 60.5 111 44.1
BolC8t48410H Brassica oleracea HOM05D002756 ORTHO05D002896 1.8e-07 60.5 111 44.1
Gohir.A12G214900 Gossypium hirsutum HOM05D002756 ORTHO05D002896 1.8e-07 60.5 130 41.5
BcaNung00149 Brassica carinata HOM05D002756 ORTHO05D002896 2.4e-07 60.1 63 61.9
Potri.003G079900 Populus trichocarpa HOM05D002756 ORTHO05D002896 2.4e-07 60.1 43 76.7
A01p20420 Brassica napus HOM05D002756 ORTHO05D002896 3.1e-07 59.7 98 50.0
BraA01t01971Z Brassica rapa HOM05D002756 ORTHO05D002896 3.1e-07 59.7 98 50.0
Carub.0007s2457 Capsella rubella HOM05D002756 ORTHO05D002896 4.0e-07 59.3 125 43.2
Thhalv10024963m.g Eutrema salsugineum HOM05D002756 ORTHO05D002896 4.0e-07 59.3 39 84.6
Aqoxy3G02766 Aquilegia oxysepala HOM05D002756 ORTHO05D002896 6.9e-07 58.5 177 35.0
HanXRQChr17g0549241 Helianthus annuus HOM05D002756 ORTHO05D002896 6.9e-07 58.5 128 35.9
GSVIVG01005822001 Vitis vinifera HOM05D002756 ORTHO05D002896 6.9e-07 58.5 61 60.7
BcaC09g50418 Brassica carinata HOM05D002756 ORTHO05D002896 9.0e-07 58.2 89 47.2
C01p25660 Brassica napus HOM05D002756 ORTHO05D002896 9.0e-07 58.2 89 47.2
BolC1t02520H Brassica oleracea HOM05D002756 ORTHO05D002896 9.0e-07 58.2 89 47.2
Lj8C270T8 Lonicera japonica HOM05D002756 ORTHO05D002896 9.0e-07 58.2 92 45.7
Gorai.008G233100 Gossypium raimondii HOM05D002756 ORTHO05D002896 1.2e-06 57.8 128 39.8
arahy.Tifrunner.gnm1.ann1.X0SKZJ Arachis hypogaea HOM05D002756 ORTHO05D002896 2.0e-06 57.0 37 86.5
A08p12710 Brassica napus HOM05D002756 ORTHO05D002896 2.6e-06 56.6 148 36.5
PSO675G5676 Papaver somniferum HOM05D002756 ORTHO05D002896 2.6e-06 56.6 208 31.2
Peaxi162Scf00190g00123 Petunia axillaris HOM05D002756 ORTHO05D002896 2.6e-06 56.6 151 40.4
TAR375G0301 Trochodendron aralioides HOM05D002756 ORTHO05D002896 3.4e-06 56.2 220 34.1
Gohir.A03G006260 Gossypium hirsutum HOM05D002756 ORTHO05D002896 4.5e-06 55.8 75 52.0
Nitab4.5_0002206g0010 Nicotiana tabacum HOM05D002756 ORTHO05D002896 4.5e-06 55.8 150 38.0
Sabra14G0033200 Salix brachista HOM05D002756 ORTHO05D002896 4.5e-06 55.8 214 32.7
SGA_v2.0_scaffold199G41225 Striga asiatica HOM05D002756 ORTHO05D002896 4.5e-06 55.8 98 44.9
ATR0057G080 Amborella trichopoda HOM05D002756 ORTHO05D002896 5.8e-06 55.5 60 53.3
Nitab4.5_0000506g0050 Nicotiana tabacum HOM05D002756 ORTHO05D002896 9.9e-06 54.7 147 39.5


User provided reference genes

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