Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0386271 Lupinus albus HOM05D007995 ORTHO05D001819 5.3e-99 364.4 189 100.0
Lalb_Chr04g0256671 Lupinus albus HOM05D007995 ORTHO05D001819 2.7e-82 308.9 189 85.2
Lalb_Chr16g0386301 Lupinus albus HOM05D007995 ORTHO05D001819 5.2e-78 294.7 187 80.7
Lalb_Chr14g0367641 Lupinus albus HOM05D007995 ORTHO05D001819 5.0e-65 251.5 189 69.3
Lalb_Chr16g0386201 Lupinus albus HOM05D007995 ORTHO05D001819 5.2e-54 214.9 192 61.5
Lalb_Chr16g0386221 Lupinus albus HOM05D007995 ORTHO05D001819 5.2e-54 214.9 192 60.9
Lalb_Chr16g0386251 Lupinus albus HOM05D007995 ORTHO05D001819 1.5e-53 213.4 172 65.1
Lalb_Chr14g0366281 Lupinus albus HOM05D007995 ORTHO05D001819 5.8e-53 211.5 189 60.3
Lalb_Chr14g0366251 Lupinus albus HOM05D007995 ORTHO05D001819 1.7e-52 209.9 184 60.9
Lalb_Chr14g0366261 Lupinus albus HOM05D007995 ORTHO05D001819 1.1e-48 197.2 189 56.1
Lalb_Chr22g0356081 Lupinus albus HOM05D007995 ORTHO05D001819 4.3e-48 195.3 189 53.4
Glyma.15G207000 Glycine max HOM05D007995 ORTHO05D001819 4.9e-44 181.8 172 57.6
Glyma.15G207100 Glycine max HOM05D007995 ORTHO05D001819 6.4e-44 181.4 172 57.6
Lalb_Chr22g0356001 Lupinus albus HOM05D007995 ORTHO05D001819 6.4e-44 181.4 166 56.0
TPR.G36428 Trifolium pratense HOM05D007995 ORTHO05D001819 2.3e-41 172.9 154 55.8
VMungo0720G2167 Vigna mungo HOM05D007995 ORTHO05D001819 2.5e-40 169.5 174 52.9
Ca_06775_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 1.1e-38 164.1 172 50.0
arahy.Tifrunner.gnm1.ann1.8T8NTE Arachis hypogaea HOM05D007995 ORTHO05D001819 4.0e-38 162.2 193 47.7
Lj3g0018744 Lotus japonicus HOM05D007995 ORTHO05D001819 2.2e-36 156.4 186 50.0
Phvul.007G271600 Phaseolus vulgaris HOM05D007995 ORTHO05D001819 2.2e-36 156.4 172 48.8
Phvul.007G271650 Phaseolus vulgaris HOM05D007995 ORTHO05D001819 6.4e-36 154.8 172 47.1
Medtr6g023905 Medicago truncatula HOM05D007995 ORTHO05D001819 1.4e-35 153.7 169 49.1
Medtr4g025010 Medicago truncatula HOM05D007995 ORTHO05D001819 9.3e-35 151.0 172 48.3
TPR.G30439 Trifolium pratense HOM05D007995 ORTHO05D001819 2.7e-34 149.4 175 48.0
Medtr6g023995 Medicago truncatula HOM05D007995 ORTHO05D001819 1.5e-32 143.7 159 50.9
Ca_31166_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 5.6e-32 141.7 152 51.3
Lalb_Chr16g0386281 Lupinus albus HOM05D007995 ORTHO05D001819 5.6e-32 141.7 131 58.0
TPR.G30442 Trifolium pratense HOM05D007995 ORTHO05D001819 7.3e-32 141.4 182 45.1
TPR.G16188 Trifolium pratense HOM05D007995 ORTHO05D001819 9.6e-32 141.0 173 48.6
Medtr6g024040 Medicago truncatula HOM05D007995 ORTHO05D001819 2.8e-31 139.4 180 46.7
Psat1g140040 Pisum sativum HOM05D007995 ORTHO05D001819 6.2e-31 138.3 165 46.7
Ca_30953_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 5.3e-30 135.2 172 44.8
Medtr8g032810 Medicago truncatula HOM05D007995 ORTHO05D001819 1.5e-29 133.7 172 43.0
Lalb_Chr14g0366241 Lupinus albus HOM05D007995 ORTHO05D001819 2.0e-29 133.3 103 72.8
TPR.G33129 Trifolium pratense HOM05D007995 ORTHO05D001819 2.6e-29 132.9 175 45.7
TPR.G32889 Trifolium pratense HOM05D007995 ORTHO05D001819 3.4e-29 132.5 172 44.8
TPR.G18497 Trifolium pratense HOM05D007995 ORTHO05D001819 5.8e-29 131.7 114 57.0
TPR.G28273 Trifolium pratense HOM05D007995 ORTHO05D001819 5.8e-29 131.7 172 43.0
Ca_14013_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 1.3e-28 130.6 172 43.0
Medtr5g095680 Medicago truncatula HOM05D007995 ORTHO05D001819 1.7e-28 130.2 173 44.5
Psat1g086800 Pisum sativum HOM05D007995 ORTHO05D001819 1.7e-28 130.2 172 44.2
TPR.G16193 Trifolium pratense HOM05D007995 ORTHO05D001819 1.7e-28 130.2 176 46.6
Psat3g149840 Pisum sativum HOM05D007995 ORTHO05D001819 8.4e-28 127.9 175 44.0
Medtr6g024035 Medicago truncatula HOM05D007995 ORTHO05D001819 5.4e-27 125.2 179 44.7
Medtr6g024185 Medicago truncatula HOM05D007995 ORTHO05D001819 9.3e-27 124.4 168 42.9
Psat1g087920 Pisum sativum HOM05D007995 ORTHO05D001819 1.6e-26 123.6 181 43.6
Ca_31346_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 3.9e-25 119.0 172 40.1
Ca_31352_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 3.9e-25 119.0 172 40.1
Ca_26896_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 6.7e-25 118.2 158 41.8
Ca_17116_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 1.5e-24 117.1 172 39.0
Medtr6g024020 Medicago truncatula HOM05D007995 ORTHO05D001819 1.9e-24 116.7 176 42.6
Medtr6g024180 Medicago truncatula HOM05D007995 ORTHO05D001819 2.5e-24 116.3 176 42.6
Medtr6g023935 Medicago truncatula HOM05D007995 ORTHO05D001819 2.1e-23 113.2 172 40.7
Ca_28343_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 2.8e-23 112.8 176 42.0
Medtr6g023915 Medicago truncatula HOM05D007995 ORTHO05D001819 9.0e-22 107.8 172 39.5
TPR.G22073 Trifolium pratense HOM05D007995 ORTHO05D001819 1.9e-19 100.1 181 37.0
Medtr6g024195 Medicago truncatula HOM05D007995 ORTHO05D001819 1.6e-18 97.1 179 41.9
arahy.Tifrunner.gnm1.ann1.I3WRP4 Arachis hypogaea HOM05D007995 ORTHO05D001819 3.9e-17 92.4 155 37.4
Medtr6g023895 Medicago truncatula HOM05D007995 ORTHO05D001819 3.9e-17 92.4 78 62.8
Medtr0155s0080 Medicago truncatula HOM05D007995 ORTHO05D001819 8.7e-17 91.3 174 37.4
Medtr6g024050 Medicago truncatula HOM05D007995 ORTHO05D001819 8.7e-17 91.3 178 37.6
Medtr6g024060 Medicago truncatula HOM05D007995 ORTHO05D001819 1.1e-16 90.9 175 34.3
Medtr6g024075 Medicago truncatula HOM05D007995 ORTHO05D001819 1.1e-16 90.9 175 34.3
Medtr0155s0060 Medicago truncatula HOM05D007995 ORTHO05D001819 1.5e-16 90.5 159 35.8
Medtr6g025520 Medicago truncatula HOM05D007995 ORTHO05D001819 3.3e-16 89.4 180 35.0
ClCG09G008860 Citrullus lanatus HOM05D003146 ORTHO05D001819 2.1e-15 86.7 153 37.9
Medtr6g024085 Medicago truncatula HOM05D007995 ORTHO05D001819 3.1e-14 82.8 174 35.6
Medtr6g024170 Medicago truncatula HOM05D007995 ORTHO05D001819 5.3e-14 82.0 180 33.9
QL04p007223 Quercus lobata HOM05D003146 ORTHO05D001819 3.4e-13 79.3 180 32.8
MELO3C000387.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.3e-12 77.4 171 33.3
MELO3C000722.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.8e-12 75.9 171 33.3
Glyma.16G055300 Glycine max HOM05D003146 ORTHO05D001819 3.8e-12 75.9 178 29.2
MELO3C001332.2 Cucumis melo HOM05D003146 ORTHO05D001819 8.4e-12 74.7 177 33.9
MELO3C028122.2 Cucumis melo HOM05D003146 ORTHO05D001819 8.4e-12 74.7 177 33.9
CsaV3_6G026320 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.4e-11 73.9 165 33.9
CsaV3_6G026340 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.4e-11 73.9 165 33.9
CsaV3_6G027350 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.4e-11 73.9 165 33.9
QL06p013378 Quercus lobata HOM05D003146 ORTHO05D001819 1.4e-11 73.9 186 31.7
MELO3C032417.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.2e-11 72.8 171 33.3
Ca_30975_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 5.5e-11 72.0 139 31.7
Medtr6g025580 Medicago truncatula HOM05D007995 ORTHO05D001819 5.5e-11 72.0 173 35.8
Medtr4g031690 Medicago truncatula HOM05D007995 ORTHO05D001819 9.3e-11 71.2 145 37.2
Medtr6g025560 Medicago truncatula HOM05D007995 ORTHO05D001819 9.3e-11 71.2 173 35.8
ClCG07G004740 Citrullus lanatus HOM05D003146 ORTHO05D001819 2.7e-10 69.7 178 30.9
MELO3C030064.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.5e-10 69.3 177 32.2
MELO3C001272.2 Cucumis melo HOM05D003146 ORTHO05D001819 7.9e-10 68.2 133 35.3
THA.LOC104802649 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 7.9e-10 68.2 183 32.2
Solyc03g112180.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 1.0e-09 67.8 153 30.7
Ca_28472_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 2.3e-09 66.6 74 50.0
PGSC0003DMG400003833 Solanum tuberosum HOM05D003146 ORTHO05D001819 2.3e-09 66.6 150 30.0
MELO3C027589.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.0e-09 66.2 139 35.3
Actinidia18484 Actinidia chinensis HOM05D003146 ORTHO05D001819 8.7e-09 64.7 154 31.2
QL04p005674 Quercus lobata HOM05D003146 ORTHO05D001819 8.7e-09 64.7 137 34.3
QL06p013377 Quercus lobata HOM05D003146 ORTHO05D001819 1.1e-08 64.3 182 29.7
Lj1g0000753 Lotus japonicus HOM05D003146 ORTHO05D001819 2.5e-08 63.2 189 29.1
Glyma.19G092600 Glycine max HOM05D018574 ORTHO05D001819 9.7e-08 61.2 182 29.1
VMungo1383G0905 Vigna mungo HOM05D003146 ORTHO05D001819 9.7e-08 61.2 168 25.6
CsaV3_6G021230 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.8e-07 59.7 174 32.8
CsaV3_6G020220 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.7e-07 59.3 138 33.3
QL08p052685 Quercus lobata HOM05D003146 ORTHO05D001819 4.8e-07 58.9 156 32.1
QL08p052692 Quercus lobata HOM05D003146 ORTHO05D001819 4.8e-07 58.9 156 32.1
A01p37050 Brassica napus HOM05D003146 ORTHO05D001819 1.1e-06 57.8 173 29.5
BraA01t03766Z Brassica rapa HOM05D003146 ORTHO05D001819 1.1e-06 57.8 173 29.5
CsaV3_6G020190 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.8e-06 57.0 170 33.5
CsaV3_6G021250 Cucumis sativus L. HOM05D003146 ORTHO05D001819 4.1e-06 55.8 125 32.8
Rhsim07G0095800 Rhododendron simsii HOM05D003146 ORTHO05D001819 5.3e-06 55.5 180 28.9
Nitab4.5_0002228g0040 Nicotiana tabacum HOM05D011410 ORTHO05D013015 6.9e-06 55.1 178 29.2
Medtr3g037210 Medicago truncatula HOM05D018574 ORTHO05D001819 9.0e-06 54.7 104 37.5


User provided reference genes

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