Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0385901 Lupinus albus HOM05D004858 ORTHO05D005600 5.3e-56 220.7 105 100.0
Lalb_Chr09g0329381 Lupinus albus HOM05D004858 ORTHO05D005600 7.2e-53 210.3 105 94.3
Lalb_Chr05g0220461 Lupinus albus HOM05D004858 ORTHO05D005600 9.7e-50 199.9 105 92.4
Glyma.17G157000 Glycine max HOM05D004858 ORTHO05D005600 2.0e-42 175.6 103 82.5
Atru.chr3.1087 Acer truncatum HOM05D004858 ORTHO05D005600 9.7e-42 173.3 102 82.4
Medtr4g097800 Medicago truncatula HOM05D004858 ORTHO05D005600 1.7e-41 172.6 105 75.2
Glyma.05G110100 Glycine max HOM05D004858 ORTHO05D005600 2.2e-41 172.2 103 80.6
VMungo0251G0206 Vigna mungo HOM05D004858 ORTHO05D005600 2.2e-41 172.2 102 82.4
TPR.G22417 Trifolium pratense HOM05D004858 ORTHO05D005600 1.8e-40 169.1 105 75.2
arahy.Tifrunner.gnm1.ann1.YV33P0 Arachis hypogaea HOM05D004858 ORTHO05D005600 4.1e-40 167.9 102 77.5
Lj4g0010254 Lotus japonicus HOM05D004858 ORTHO05D005600 6.9e-40 167.2 107 79.4
Phvul.003G231600 Phaseolus vulgaris HOM05D004858 ORTHO05D005600 3.4e-39 164.9 102 79.4
Ca_22084_v3 Cicer arietinum L. HOM05D004858 ORTHO05D005600 1.3e-38 162.9 107 77.6
THA.LOC104807646 Tarenaya hassleriana HOM05D004858 ORTHO05D005600 1.3e-38 162.9 102 75.5
Gorai.003G034000 Gossypium raimondii HOM05D004858 ORTHO05D005600 1.7e-38 162.5 102 76.5
Cfa006798 Carpinus fangiana HOM05D004858 ORTHO05D005600 2.2e-38 162.2 105 75.2
COL.COLO4_11647 Corchorus olitorius HOM05D004858 ORTHO05D005600 2.9e-38 161.8 102 78.4
FvH4_1g18620 Fragaria vesca HOM05D004858 ORTHO05D005600 3.8e-38 161.4 104 75.0
FAN19G1409 Fragaria x ananassa HOM05D004858 ORTHO05D005600 3.8e-38 161.4 104 75.0
FAN26G1754 Fragaria x ananassa HOM05D004858 ORTHO05D005600 5.0e-38 161.0 104 75.0
Gohir.D03G032400 Gossypium hirsutum HOM05D004858 ORTHO05D005600 5.0e-38 161.0 102 76.5
FAN23G1848 Fragaria x ananassa HOM05D004858 ORTHO05D005600 6.5e-38 160.6 104 75.0
QL06p038187 Quercus lobata HOM05D004858 ORTHO05D005600 8.5e-38 160.2 104 74.0
Gohir.A11G210700 Gossypium hirsutum HOM05D004858 ORTHO05D005600 1.1e-37 159.8 102 76.5
FAN28G0049 Fragaria x ananassa HOM05D004858 ORTHO05D005600 1.4e-37 159.5 104 74.0
Gohir.A02G148000 Gossypium hirsutum HOM05D004858 ORTHO05D005600 1.4e-37 159.5 102 75.5
RcHm_v2.0_Chr2g0109411 Rosa chinensis HOM05D004858 ORTHO05D005600 1.4e-37 159.5 104 75.0
Eucgr.I00649 Eucalyptus grandis HOM05D004858 ORTHO05D005600 2.5e-37 158.7 102 75.5
Ciclev10026828m.g Citrus clementina HOM05D004858 ORTHO05D005600 4.2e-37 157.9 102 76.5
CANSAT01G1371 Cannabis sativa HOM05D004858 ORTHO05D005600 5.5e-37 157.5 102 75.5
Duzib187G0061 Durio zibethinus HOM05D004858 ORTHO05D005600 7.2e-37 157.1 102 76.5
ClCG10G008050 Citrullus lanatus HOM05D004858 ORTHO05D005600 9.4e-37 156.8 103 75.7
TWI74G1540 Tripterygium wilfordii HOM05D004858 ORTHO05D005600 1.2e-36 156.4 102 73.5
Gohir.D11G212400 Gossypium hirsutum HOM05D004858 ORTHO05D005600 1.6e-36 156.0 97 77.3
Gorai.007G228300 Gossypium raimondii HOM05D004858 ORTHO05D005600 1.6e-36 156.0 97 77.3
Prupe.6G213100 Prunus persica HOM05D004858 ORTHO05D005600 4.7e-36 154.5 105 73.3
AL7G12840 Arabidopsis lyrata HOM05D004858 ORTHO05D005600 6.1e-36 154.1 103 70.9
CsaV3_3G007040 Cucumis sativus L. HOM05D004858 ORTHO05D005600 6.1e-36 154.1 103 73.8
Carub.0007s0239 Capsella rubella HOM05D004858 ORTHO05D005600 7.9e-36 153.7 103 70.9
CiPaw.08G148200 Carya illinoinensis HOM05D004858 ORTHO05D005600 7.9e-36 153.7 103 73.8
CARHR246220 Cardamine hirsuta HOM05D004858 ORTHO05D005600 1.0e-35 153.3 103 70.9
PGR102G0524 Punica granatum HOM05D004858 ORTHO05D005600 1.0e-35 153.3 102 75.5
CiPaw.07G039500 Carya illinoinensis HOM05D004858 ORTHO05D005600 2.3e-35 152.1 102 73.5
SGA_v2.0_scaffold121G33088 Striga asiatica HOM05D004858 ORTHO05D005600 3.0e-35 151.8 105 71.4
THA.LOC104804193 Tarenaya hassleriana HOM05D004858 ORTHO05D005600 3.0e-35 151.8 102 69.6
AT4G37830 Arabidopsis thaliana HOM05D004858 ORTHO05D005600 6.7e-35 150.6 102 70.6
Sp7g35470 Schrenkiella parvula HOM05D004858 ORTHO05D005600 6.7e-35 150.6 103 68.9
A08p22870 Brassica napus HOM05D004858 ORTHO05D005600 8.8e-35 150.2 103 69.9
GSVIVG01006593001 Vitis vinifera HOM05D004858 ORTHO05D005600 8.8e-35 150.2 102 74.5
BcaC01g00373 Brassica carinata HOM05D004858 ORTHO05D005600 1.5e-34 149.4 103 69.9
BolC3t20143H Brassica oleracea HOM05D004858 ORTHO05D005600 1.5e-34 149.4 103 69.9
arahy.Tifrunner.gnm1.ann1.J6YKXI Arachis hypogaea HOM05D004858 ORTHO05D005600 2.0e-34 149.1 100 71.0
Duzib147G0425 Durio zibethinus HOM05D004858 ORTHO05D005600 2.0e-34 149.1 102 73.5
Nn6g34570 Nelumbo nucifera HOM05D004858 ORTHO05D005600 2.0e-34 149.1 105 74.3
THA.LOC104824932 Tarenaya hassleriana HOM05D004858 ORTHO05D005600 2.0e-34 149.1 102 69.6
Aqoxy6G01531 Aquilegia oxysepala HOM05D004858 ORTHO05D005600 2.6e-34 148.7 105 71.4
Thhalv10026651m.g Eutrema salsugineum HOM05D004858 ORTHO05D005600 2.6e-34 148.7 103 68.9
MD02G1193900 Malus domestica HOM05D004858 ORTHO05D005600 2.6e-34 148.7 101 72.3
Actinidia36402 Actinidia chinensis HOM05D004858 ORTHO05D005600 3.3e-34 148.3 102 71.6
Dinv23069 Davidia involucrata HOM05D004858 ORTHO05D005600 3.3e-34 148.3 101 74.3
Cpa.g.sc129.47 Carica papaya HOM05D004858 ORTHO05D005600 9.7e-34 146.7 102 68.6
PSO675G0895 Papaver somniferum HOM05D004858 ORTHO05D005600 9.7e-34 146.7 105 71.4
Rhsim08G0089100 Rhododendron simsii HOM05D004858 ORTHO05D005600 1.3e-33 146.4 102 70.6
Potri.007G008800 Populus trichocarpa HOM05D004858 ORTHO05D005600 1.7e-33 146.0 105 67.6
Sed0006730 Sechium edule HOM05D004858 ORTHO05D005600 1.7e-33 146.0 103 69.9
TAR381G0631 Trochodendron aralioides HOM05D004858 ORTHO05D005600 1.7e-33 146.0 105 70.5
CDE02G3413 Ceratophyllum demersum HOM05D004858 ORTHO05D005600 2.2e-33 145.6 105 70.5
CDE01G0584 Ceratophyllum demersum HOM05D004858 ORTHO05D005600 3.7e-33 144.8 105 73.3
MBI16_g05028_MAGBIO Magnolia biondii HOM05D004858 ORTHO05D005600 4.8e-33 144.4 102 69.6
TWI77G0309 Tripterygium wilfordii HOM05D004858 ORTHO05D005600 4.8e-33 144.4 99 70.7
Haze_03960 Corylus avellana HOM05D004858 ORTHO05D005600 1.4e-32 142.9 92 76.1
Manes.12G119200 Manihot esculenta HOM05D004858 ORTHO05D005600 1.8e-32 142.5 105 70.5
CSS0041224 Camellia sinensis var. sinensis HOM05D004858 ORTHO05D005600 2.4e-32 142.1 105 68.6
CSS0047057 Camellia sinensis var. sinensis HOM05D004858 ORTHO05D005600 2.4e-32 142.1 105 68.6
Migut.L00438 Erythranthe guttata HOM05D004858 ORTHO05D005600 2.4e-32 142.1 103 67.0
HPP92_024955 Vanilla planifolia HOM05D004858 ORTHO05D005600 2.4e-32 142.1 109 66.1
Aa31LG6G14730 Aethionema arabicum HOM05D004858 ORTHO05D005600 4.1e-32 141.4 130 56.2
MSTRG.23644 Avicennia marina HOM05D004858 ORTHO05D005600 5.3e-32 141.0 105 69.5
Duzib264G0490 Durio zibethinus HOM05D004858 ORTHO05D005600 9.1e-32 140.2 102 68.6
MBI16_g31809_MAGBIO Magnolia biondii HOM05D004858 ORTHO05D005600 9.1e-32 140.2 99 70.7
Hma1.2p1_1953F.1_g308860 Hydrangea macrophylla HOM05D004858 ORTHO05D005600 1.2e-31 139.8 105 68.6
Peaxi162Scf00096g01525 Petunia axillaris HOM05D004858 ORTHO05D005600 2.0e-31 139.0 105 65.7
Thecc.01G079800 Theobroma cacao HOM05D004858 ORTHO05D005600 2.0e-31 139.0 92 76.1
Os03g0772800 Oryza sativa ssp. japonica HOM05D004858 ORTHO05D005600 3.5e-31 138.3 102 65.7
C01p01370 Brassica napus HOM05D004858 ORTHO05D005600 4.5e-31 137.9 103 63.1
unitig_46.g18678 Utricularia gibba HOM05D004858 ORTHO05D005600 4.5e-31 137.9 103 67.0
Psat4g088320 Pisum sativum HOM05D004858 ORTHO05D005600 5.9e-31 137.5 92 72.8
Peaxi162Scf00118g01314 Petunia axillaris HOM05D004858 ORTHO05D005600 1.0e-30 136.7 102 64.7
BolC1t00134H Brassica oleracea HOM05D004858 ORTHO05D005600 1.7e-30 136.0 103 62.1
HanXRQChr09g0263081 Helianthus annuus HOM05D004858 ORTHO05D005600 3.8e-30 134.8 102 65.7
unitig_37.g12385 Utricularia gibba HOM05D004858 ORTHO05D005600 3.8e-30 134.8 102 66.7
TAR628G1120 Trochodendron aralioides HOM05D004858 ORTHO05D005600 5.0e-30 134.4 107 67.3
Manes.13G106700 Manihot esculenta HOM05D004858 ORTHO05D005600 1.1e-29 133.3 105 67.6
ECA232G2479 Erigeron canadensis HOM05D004858 ORTHO05D005600 2.5e-29 132.1 103 61.2
EL10Ac6g14949 Beta vulgaris HOM05D004858 ORTHO05D005600 3.2e-29 131.7 105 63.8
Lsat_1_v5_gn_2_81581 Lactuca sativa HOM05D004858 ORTHO05D005600 4.2e-29 131.3 102 63.7
Solyc03g043850.3 Solanum lycopersicum HOM05D004858 ORTHO05D005600 4.2e-29 131.3 102 61.8
HanXRQChr14g0447621 Helianthus annuus HOM05D004858 ORTHO05D005600 7.2e-29 130.6 102 63.7
Sc16g0000840 Simmondsia chinensis HOM05D004858 ORTHO05D005600 9.4e-29 130.2 105 63.8
SalBow3G1594 Salvia bowleyana HOM05D004858 ORTHO05D005600 1.2e-28 129.8 101 65.3
SalBow3G4557 Salvia bowleyana HOM05D004858 ORTHO05D005600 1.2e-28 129.8 101 65.3
HanXRQChr07g0203771 Helianthus annuus HOM05D004858 ORTHO05D005600 2.7e-28 128.6 102 59.8
DCAR_021459 Daucus carota HOM05D004858 ORTHO05D005600 8.0e-28 127.1 102 64.7
DCAR_025838 Daucus carota HOM05D004858 ORTHO05D005600 8.0e-28 127.1 92 70.7
Nn5g30705 Nelumbo nucifera HOM05D004858 ORTHO05D005600 1.0e-27 126.7 92 70.7
Solyc02g091880.4 Solanum lycopersicum HOM05D004858 ORTHO05D005600 1.8e-27 125.9 102 61.8
Sopen02g036450 Solanum pennellii HOM05D004858 ORTHO05D005600 1.8e-27 125.9 102 61.8
Cc07_g07610 Coffea canephora HOM05D004858 ORTHO05D005600 2.3e-27 125.6 106 63.2
ECA238G2402 Erigeron canadensis HOM05D004858 ORTHO05D005600 2.3e-27 125.6 102 60.8
Dinv26980 Davidia involucrata HOM05D004858 ORTHO05D005600 5.2e-27 124.4 82 72.0
AUR62007965 Chenopodium quinoa HOM05D004858 ORTHO05D005600 6.7e-27 124.0 105 63.8
Sabra07G0006800 Salix brachista HOM05D004858 ORTHO05D005600 6.7e-27 124.0 91 67.0
CiPaw.10G150100 Carya illinoinensis HOM05D004858 ORTHO05D005600 1.1e-26 123.2 69 75.4
Oeu061526.2 Olea europaea HOM05D004858 ORTHO05D005600 1.1e-26 123.2 94 70.2
HPP92_021258 Vanilla planifolia HOM05D000682 ORTHO05D000510 1.5e-26 122.9 77 74.0
CAN.G1061.6 Capsicum annuum HOM05D004858 ORTHO05D005600 7.5e-26 120.6 103 62.1
MD15G1304000 Malus domestica HOM05D004858 ORTHO05D005600 1.3e-25 119.8 106 63.2
Nitab4.5_0026287g0010 Nicotiana tabacum HOM05D004858 ORTHO05D005600 1.3e-25 119.8 92 68.5
Lsat_1_v5_gn_4_159121 Lactuca sativa HOM05D004858 ORTHO05D005600 2.2e-25 119.0 102 59.8
Oeu014311.1 Olea europaea HOM05D004858 ORTHO05D005600 4.8e-25 117.9 94 67.0
Zm00001eb058950 Zea mays HOM05D004858 ORTHO05D005600 1.4e-24 116.3 94 64.9
ATR0767G115 Amborella trichopoda HOM05D004858 ORTHO05D005600 2.4e-24 115.5 91 62.6
CSS0011371 Camellia sinensis var. sinensis HOM05D004858 ORTHO05D005600 2.0e-23 112.5 91 63.7
PGSC0003DMG400017913 Solanum tuberosum HOM05D004858 ORTHO05D005600 1.5e-21 106.3 92 57.6
AUR62003145 Chenopodium quinoa HOM05D004858 ORTHO05D005600 4.2e-21 104.8 95 61.1
Nitab4.5_0007790g0010 Nicotiana tabacum HOM05D004858 ORTHO05D005600 7.2e-21 104.0 93 59.1
PGSC0003DMG400030258 Solanum tuberosum HOM05D004858 ORTHO05D005600 2.1e-20 102.4 94 56.4
Mapoly0043s0104 Marchantia polymorpha HOM05D004858 ORTHO05D005600 1.0e-19 100.1 91 54.9
MELO3C014946.2 Cucumis melo HOM05D004858 ORTHO05D005600 2.3e-19 99.0 78 69.2
vmacro18001 Vaccinium macrocarpon HOM05D004858 ORTHO05D005600 2.3e-19 99.0 50 82.0
Pp3c5_3360 Physcomitrium patens HOM05D004858 ORTHO05D005600 5.2e-19 97.8 89 55.1
BraA08t34250Z Brassica rapa HOM05D004858 ORTHO05D005600 2.6e-18 95.5 82 62.2
C03p79020 Brassica napus HOM05D004858 ORTHO05D005600 1.3e-17 93.2 77 63.6
AagrBONN_evm.TU.Sc2ySwM_344.1653 Anthoceros agrestis HOM05D004858 ORTHO05D005600 1.7e-17 92.8 101 53.5
BraA01t00120Z Brassica rapa HOM05D004858 ORTHO05D005600 3.7e-17 91.7 106 49.1
Nitab4.5_0002639g0030 Nicotiana tabacum HOM05D004858 ORTHO05D005600 1.6e-15 86.3 77 61.0
CSS0003752 Camellia sinensis var. sinensis HOM05D004858 ORTHO05D005600 2.7e-15 85.5 77 61.0
PGSC0003DMG400030628 Solanum tuberosum HOM05D004858 ORTHO05D005600 3.8e-14 81.6 111 45.9
CBR_g50891 Chara braunii HOM05D004858 ORTHO05D005600 1.6e-12 76.3 92 43.5
Pp3c6_25050 Physcomitrium patens HOM05D004858 ORTHO05D005600 6.1e-12 74.3 76 51.3
Ah.03g139600 Amaranthus hybridus HOM05D004858 ORTHO05D005600 8.0e-12 73.9 74 59.5
Sc03g0000690 Simmondsia chinensis HOM05D004858 ORTHO05D005600 1.8e-11 72.8 79 55.7
Hund16598 Selenicereus undatus HOM05D004858 ORTHO05D005600 3.0e-11 72.0 80 55.0
Nitab4.5_0000396g0060 Nicotiana tabacum HOM05D004858 ORTHO05D005600 8.8e-11 70.5 93 48.4
Pp3c13_15160 Physcomitrium patens HOM05D004858 ORTHO05D005600 2.6e-10 68.9 61 50.8
vmacro22430 Vaccinium macrocarpon HOM05D004858 ORTHO05D005600 7.5e-10 67.4 40 72.5
SEGI_12659 Sequoiadendron giganteum HOM05D004858 ORTHO05D005600 8.3e-09 63.9 50 60.0
PRCOL_00006369 Prasinoderma coloniale HOM05D004858 ORTHO05D005600 1.2e-07 60.1 88 42.0
MCO08G099 Micromonas commoda HOM05D004858 ORTHO05D005600 2.0e-07 59.3 75 37.3
SHI12046 Sapria himalayana HOM05D004858 ORTHO05D005600 7.7e-07 57.4 35 68.6
arahy.Tifrunner.gnm1.ann1.0N5P6D Arachis hypogaea HOM05D004858 ORTHO05D005600 1.7e-06 56.2 64 57.8
arahy.Tifrunner.gnm1.ann1.HTA6FY Arachis hypogaea HOM05D004858 ORTHO05D005600 1.7e-06 56.2 64 57.8
A01p01210 Brassica napus HOM05D004858 ORTHO05D005600 1.7e-06 56.2 62 50.0


User provided reference genes

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