Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0385611 Lupinus albus HOM05D002953 ORTHO05D003249 4.3e-158 561.6 356 100.0
Medtr4g082910 Medicago truncatula HOM05D002953 ORTHO05D003249 3.3e-57 226.5 372 45.7
Lj4g0014446 Lotus japonicus HOM05D002953 ORTHO05D003249 1.2e-54 218.0 392 44.6
VMungo0251G2769 Vigna mungo HOM05D002953 ORTHO05D003249 2.9e-53 213.4 362 43.6
TPR.G34076 Trifolium pratense HOM05D002953 ORTHO05D003249 1.5e-49 201.1 369 42.5
Phvul.002G168100 Phaseolus vulgaris HOM05D002953 ORTHO05D003249 1.2e-46 191.4 362 40.1
Lalb_Chr17g0341061 Lupinus albus HOM05D002953 ORTHO05D003249 7.1e-44 182.2 362 42.8
Psat7g135400 Pisum sativum HOM05D002953 ORTHO05D003249 1.2e-40 171.4 312 41.0
Ca_18812_v3 Cicer arietinum L. HOM05D002953 ORTHO05D003249 6.8e-39 165.6 312 43.6
Glyma.20G027100 Glycine max HOM05D002953 ORTHO05D003249 1.2e-38 164.9 317 42.6
Ciclev10033969m.g Citrus clementina HOM05D002953 ORTHO05D003249 1.0e-34 151.8 383 34.2
Medtr5g043690 Medicago truncatula HOM05D002953 ORTHO05D003249 7.3e-33 145.6 364 39.0
TPR.G24432 Trifolium pratense HOM05D002953 ORTHO05D003249 9.6e-33 145.2 355 38.6
Atru.chr11.1683 Acer truncatum HOM05D002953 ORTHO05D003249 1.6e-32 144.4 369 35.2
arahy.Tifrunner.gnm1.ann1.GA8N54 Arachis hypogaea HOM05D002953 ORTHO05D003249 2.4e-31 140.6 362 40.1
Glyma.07G226700 Glycine max HOM05D002953 ORTHO05D003249 1.2e-30 138.3 314 38.5
Psat2g127880 Pisum sativum HOM05D002953 ORTHO05D003249 1.5e-30 137.9 280 41.1
Potri.008G093300 Populus trichocarpa HOM05D002953 ORTHO05D003249 4.5e-30 136.3 375 32.5
Actinidia19918 Actinidia chinensis HOM05D002953 ORTHO05D003249 5.8e-30 136.0 366 34.7
TWI75G0656 Tripterygium wilfordii HOM05D002953 ORTHO05D003249 1.3e-29 134.8 358 33.5
arahy.Tifrunner.gnm1.ann1.FH6P3F Arachis hypogaea HOM05D002953 ORTHO05D003249 1.4e-28 131.3 368 38.6
Prupe.1G282700 Prunus persica HOM05D002953 ORTHO05D003249 7.1e-28 129.0 360 42.8
Rhsim12G0076400 Rhododendron simsii HOM05D002953 ORTHO05D003249 1.2e-27 128.3 380 37.6
VMungo1215G1853 Vigna mungo HOM05D002953 ORTHO05D003249 3.5e-27 126.7 363 33.3
QL03p071046 Quercus lobata HOM05D002953 ORTHO05D003249 1.1e-25 121.7 363 31.1
Dinv16709 Davidia involucrata HOM05D002953 ORTHO05D003249 1.5e-25 121.3 281 38.4
FAN07G2390 Fragaria x ananassa HOM05D000954 ORTHO05D000822 2.5e-25 120.6 360 31.1
Potri.010G160900 Populus trichocarpa HOM05D002953 ORTHO05D003249 7.4e-25 119.0 362 33.1
Haze_11930 Corylus avellana HOM05D002953 ORTHO05D003249 9.6e-25 118.6 364 37.1
CiPaw.05G127400 Carya illinoinensis HOM05D002953 ORTHO05D003249 1.1e-23 115.2 365 32.6
FAN22G1160 Fragaria x ananassa HOM05D000954 ORTHO05D003249 6.9e-23 112.5 334 32.0
Glyma.01G056000 Glycine max HOM05D002953 ORTHO05D003249 5.8e-22 109.4 330 32.4
FvH4_4g30432 Fragaria vesca HOM05D002953 ORTHO05D003249 9.9e-22 108.6 275 33.5
Glyma.02G114300 Glycine max HOM05D002953 ORTHO05D003249 2.2e-21 107.5 248 37.9
Sabra08G0070100 Salix brachista HOM05D002953 ORTHO05D003249 3.8e-21 106.7 317 30.6
FAN12G1055 Fragaria x ananassa HOM05D002953 ORTHO05D003249 4.9e-21 106.3 270 33.0
Sabra10G0122400 Salix brachista HOM05D002953 ORTHO05D003249 6.4e-21 105.9 362 34.0
CANSAT64G0943 Cannabis sativa HOM05D002953 ORTHO05D003249 1.9e-20 104.4 374 29.9
Hma1.2p1_0357F.1_g134470 Hydrangea macrophylla HOM05D002953 ORTHO05D003249 1.9e-20 104.4 367 43.1
Migut.L01214 Erythranthe guttata HOM05D002953 ORTHO05D003249 1.2e-19 101.7 371 42.6
SalBow2G2783 Salvia bowleyana HOM05D002953 ORTHO05D003249 2.7e-19 100.5 361 38.2
Phvul.002G068600 Phaseolus vulgaris HOM05D002953 ORTHO05D003249 6.0e-19 99.4 279 34.4
SalBow2G1905 Salvia bowleyana HOM05D002953 ORTHO05D003249 6.0e-19 99.4 361 37.7
TAR371G0440 Trochodendron aralioides HOM05D002953 ORTHO05D003249 6.0e-19 99.4 278 36.3
CiPaw.06G090600 Carya illinoinensis HOM05D002953 ORTHO05D003249 7.9e-19 99.0 323 39.0
Aqoxy3G00465 Aquilegia oxysepala HOM05D002953 ORTHO05D003249 3.3e-17 93.6 362 33.7
TAR622G0728 Trochodendron aralioides HOM05D002953 ORTHO05D003249 3.3e-17 93.6 361 31.3
CSS0004001 Camellia sinensis var. sinensis HOM05D002953 ORTHO05D003249 4.3e-17 93.2 364 28.6
MD16G1063900 Malus domestica HOM05D002953 ORTHO05D003249 5.6e-17 92.8 313 29.4
Nitab4.5_0000014g0320 Nicotiana tabacum HOM05D002953 ORTHO05D003249 5.6e-17 92.8 362 27.6
RcHm_v2.0_Chr4g0438751 Rosa chinensis HOM05D002953 ORTHO05D003249 1.3e-16 91.7 276 34.8
Lj6C782G17 Lonicera japonica HOM05D002953 ORTHO05D003249 4.0e-15 86.7 333 36.0
Lj2g0025232 Lotus japonicus HOM05D002953 ORTHO05D003249 3.4e-14 83.6 378 44.7
Nn3g17381 Nelumbo nucifera HOM05D002953 ORTHO05D003249 5.8e-14 82.8 375 28.0
Oeu016226.1 Olea europaea HOM05D002953 ORTHO05D003249 5.8e-14 82.8 379 27.2
Sp1g12040 Schrenkiella parvula HOM05D002953 ORTHO05D003249 7.6e-14 82.4 371 29.6
GSVIVG01012183001 Vitis vinifera HOM05D002953 ORTHO05D003249 1.0e-13 82.0 394 34.0
MD13G1065400 Malus domestica HOM05D002953 ORTHO05D003249 1.3e-13 81.6 300 29.0
DCAR_007182 Daucus carota HOM05D002953 ORTHO05D003249 2.2e-13 80.9 360 41.9
AL1G25750 Arabidopsis lyrata HOM05D002953 ORTHO05D003249 4.9e-13 79.7 368 31.0
vmacro01327 Vaccinium macrocarpon HOM05D002953 ORTHO05D003249 6.5e-13 79.3 139 51.1
PSO017G2547 Papaver somniferum HOM05D002953 ORTHO05D003249 1.4e-12 78.2 369 32.5
PSO478G1910 Papaver somniferum HOM05D002953 ORTHO05D003249 1.4e-12 78.2 369 29.8
Cc11_g12310 Coffea canephora HOM05D002953 ORTHO05D003249 1.9e-12 77.8 369 36.6
Ca_04942_v3 Cicer arietinum L. HOM05D002953 ORTHO05D003249 2.5e-12 77.4 215 38.6
THA.LOC104807117 Tarenaya hassleriana HOM05D002953 ORTHO05D003249 2.5e-12 77.4 398 29.6
C08p16380 Brassica napus HOM05D002953 ORTHO05D003249 4.2e-12 76.6 373 27.6
CARHR014290 Cardamine hirsuta HOM05D002953 ORTHO05D003249 5.5e-12 76.3 372 27.4
BolC8t49262H Brassica oleracea HOM05D002953 ORTHO05D003249 7.1e-12 75.9 374 27.3
PGR102G2110 Punica granatum HOM05D002953 ORTHO05D003249 7.1e-12 75.9 371 28.8
CAN.G1340.5 Capsicum annuum HOM05D002953 ORTHO05D003249 9.3e-12 75.5 410 37.6
Gohir.D13G080100 Gossypium hirsutum HOM05D034412 ORTHO05D003249 9.3e-12 75.5 367 42.0
HanXRQChr12g0375351 Helianthus annuus HOM05D002953 ORTHO05D003249 9.3e-12 75.5 366 30.1
Nn4g23349 Nelumbo nucifera HOM05D002953 ORTHO05D003249 9.3e-12 75.5 373 27.1
COL.COLO4_27923 Corchorus olitorius HOM05D002953 ORTHO05D003249 1.2e-11 75.1 330 28.5
QL10p018596 Quercus lobata HOM05D002953 ORTHO05D003249 1.6e-11 74.7 365 27.7
Nitab4.5_0000334g0300 Nicotiana tabacum HOM05D000954 ORTHO05D000822 2.7e-11 73.9 358 27.7
ClCG05G023850 Citrullus lanatus HOM05D002953 ORTHO05D003249 6.0e-11 72.8 361 27.4
Aa31LG1G1100 Aethionema arabicum HOM05D002953 ORTHO05D003249 7.9e-11 72.4 382 29.3
A08p32200 Brassica napus HOM05D002953 ORTHO05D003249 7.9e-11 72.4 382 28.3
BraA08t35143Z Brassica rapa HOM05D002953 ORTHO05D003249 7.9e-11 72.4 382 28.3
Cpa.g.sc1.99 Carica papaya HOM05D002953 ORTHO05D003249 7.9e-11 72.4 330 29.4
FvH4_5g14350 Fragaria vesca HOM05D002953 ORTHO05D003249 7.9e-11 72.4 304 28.0
Gorai.013G091700 Gossypium raimondii HOM05D034412 ORTHO05D003249 7.9e-11 72.4 367 41.4
BcaC07g38708 Brassica carinata HOM05D002953 ORTHO05D003249 1.0e-10 72.0 374 27.3
Hund25195 Selenicereus undatus HOM05D002953 ORTHO05D003249 1.0e-10 72.0 267 28.5
Peaxi162Scf00187g01311 Petunia axillaris HOM05D002953 ORTHO05D003249 1.3e-10 71.6 269 31.6
BcaB03g13124 Brassica carinata HOM05D002953 ORTHO05D003249 1.8e-10 71.2 387 32.0
Sopen05g007380 Solanum pennellii HOM05D002953 ORTHO05D003249 2.3e-10 70.9 418 25.8
Hund05863 Selenicereus undatus HOM05D002953 ORTHO05D003249 3.0e-10 70.5 266 28.9
ClCG04G011980 Citrullus lanatus HOM05D002953 ORTHO05D003249 5.1e-10 69.7 327 24.8
Manes.01G029900 Manihot esculenta HOM05D002953 ORTHO05D003249 5.1e-10 69.7 307 45.0
Thhalv10009533m.g Eutrema salsugineum HOM05D002953 ORTHO05D003249 8.7e-10 68.9 370 27.8
Sed0013431 Sechium edule HOM05D002953 ORTHO05D003249 1.5e-09 68.2 360 26.1
Carub.0001s1362 Capsella rubella HOM05D002953 ORTHO05D003249 1.9e-09 67.8 367 31.1
Solyc05g012550.4 Solanum lycopersicum HOM05D002953 ORTHO05D003249 1.9e-09 67.8 175 37.1
TAR374G0889 Trochodendron aralioides HOM05D000954 ORTHO05D000822 2.5e-09 67.4 313 28.1
RcHm_v2.0_Chr7g0182351 Rosa chinensis HOM05D002953 ORTHO05D003249 3.3e-09 67.0 305 27.2
Sopen04g001490 Solanum pennellii HOM05D002953 ORTHO05D003249 3.3e-09 67.0 330 25.2
CsaV3_5G033170 Cucumis sativus L. HOM05D000954 ORTHO05D000822 1.3e-08 65.1 369 27.1
Lsat_1_v5_gn_3_56140 Lactuca sativa HOM05D002953 ORTHO05D003249 1.3e-08 65.1 366 24.9
Sc11g0002310 Simmondsia chinensis HOM05D002953 ORTHO05D003249 1.6e-08 64.7 301 32.9
Nitab4.5_0002806g0030 Nicotiana tabacum HOM05D000001 ORTHO05D000003 2.1e-08 64.3 344 25.9
Sed0002075 Sechium edule HOM05D002953 ORTHO05D003249 2.8e-08 63.9 378 25.4
MSTRG.737 Avicennia marina HOM05D002953 ORTHO05D003249 3.7e-08 63.5 119 37.0
MD06G1199500 Malus domestica HOM05D002953 ORTHO05D003249 3.7e-08 63.5 136 33.1
SGA_v2.0_scaffold36G14435 Striga asiatica HOM05D002953 ORTHO05D003249 6.3e-08 62.8 323 38.7
Gohir.A03G103200 Gossypium hirsutum HOM05D002953 ORTHO05D003249 1.1e-07 62.0 117 33.3
Prupe.5G200200 Prunus persica HOM05D002953 ORTHO05D003249 3.1e-07 60.5 306 26.1
Nitab4.5_0004304g0070 Nicotiana tabacum HOM05D000954 ORTHO05D000822 4.1e-07 60.1 386 25.9
Medtr5g043685 Medicago truncatula HOM05D002953 ORTHO05D003249 6.9e-07 59.3 169 36.7
CsaV3_1G005800 Cucumis sativus L. HOM05D002953 ORTHO05D003249 9.0e-07 58.9 359 24.2
C05p11700 Brassica napus HOM05D002953 ORTHO05D003249 1.2e-06 58.5 366 28.7
BolC5t29917H Brassica oleracea HOM05D002953 ORTHO05D003249 1.2e-06 58.5 366 28.7
AUR62003129 Chenopodium quinoa HOM05D002953 ORTHO05D003249 1.5e-06 58.2 245 28.6
Peaxi162Scf00314g00019 Petunia axillaris HOM05D002953 ORTHO05D003249 2.6e-06 57.4 319 25.1
GSVIVG01007915001 Vitis vinifera HOM05D002953 ORTHO05D003249 2.6e-06 57.4 309 24.6
AUR62007948 Chenopodium quinoa HOM05D002953 ORTHO05D003249 4.5e-06 56.6 244 28.7
Gohir.A13G080300 Gossypium hirsutum HOM05D034412 ORTHO05D003249 4.5e-06 56.6 364 41.8
AT1G13920 Arabidopsis thaliana HOM05D002953 ORTHO05D003249 1.0e-05 55.5 283 30.7


User provided reference genes

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