Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0385171 Lupinus albus HOM05D007312 ORTHO05D009209 3.2e-55 218.4 127 100.0
TPR.G38271 Trifolium pratense HOM05D007312 ORTHO05D009209 5.4e-47 191.0 127 76.4
TWI63G0684 Tripterygium wilfordii HOM05D007312 ORTHO05D009209 1.6e-46 189.5 127 74.0
MD05G1250400 Malus domestica HOM05D007312 ORTHO05D009209 2.1e-46 189.1 129 74.4
RcHm_v2.0_Chr5g0020311 Rosa chinensis HOM05D007312 ORTHO05D009209 2.7e-46 188.7 129 86.0
Lj4g0021225 Lotus japonicus HOM05D007312 ORTHO05D009209 7.8e-46 187.2 129 86.0
Medtr4g084180 Medicago truncatula HOM05D007312 ORTHO05D009209 7.8e-46 187.2 127 75.6
CiPaw.09G076400 Carya illinoinensis HOM05D007312 ORTHO05D009209 1.0e-45 186.8 127 71.7
Ca_18754_v3 Cicer arietinum L. HOM05D007312 ORTHO05D009209 3.0e-45 185.3 128 74.2
Manes.16G055800 Manihot esculenta HOM05D007312 ORTHO05D009209 5.1e-45 184.5 128 71.9
QL11p016282 Quercus lobata HOM05D007312 ORTHO05D009209 1.5e-44 183.0 126 71.4
TAR624G0630 Trochodendron aralioides HOM05D007312 ORTHO05D009209 1.5e-44 183.0 127 70.1
Phvul.002G097300 Phaseolus vulgaris HOM05D007312 ORTHO05D009209 1.9e-44 182.6 129 78.3
Potri.012G124500 Populus trichocarpa HOM05D007312 ORTHO05D009209 1.9e-44 182.6 128 71.9
VMungo0251G1106 Vigna mungo HOM05D007312 ORTHO05D009209 1.9e-44 182.6 129 79.1
Glyma.20G019100 Glycine max HOM05D007312 ORTHO05D009209 2.5e-44 182.2 129 85.3
Gohir.A12G046700 Gossypium hirsutum HOM05D007312 ORTHO05D009209 2.5e-44 182.2 128 71.1
CSS0025621 Camellia sinensis var. sinensis HOM05D007312 ORTHO05D009209 3.3e-44 181.8 128 75.0
CANSAT35G0781 Cannabis sativa HOM05D007312 ORTHO05D009209 9.6e-44 180.3 127 70.1
FvH4_3g12430 Fragaria vesca HOM05D007312 ORTHO05D009209 1.3e-43 179.9 124 87.1
Duzib052G0161 Durio zibethinus HOM05D007312 ORTHO05D009209 1.6e-43 179.5 130 69.2
Sopen02g017880 Solanum pennellii HOM05D007312 ORTHO05D009209 1.6e-43 179.5 129 71.3
PGSC0003DMG400010438 Solanum tuberosum HOM05D007312 ORTHO05D009209 1.6e-43 179.5 129 71.3
Nitab4.5_0007745g0050 Nicotiana tabacum HOM05D007312 ORTHO05D009209 2.1e-43 179.1 129 71.3
Cc09_g06000 Coffea canephora HOM05D007312 ORTHO05D009209 3.6e-43 178.3 127 70.1
AL1G49340 Arabidopsis lyrata HOM05D007312 ORTHO05D009209 4.8e-43 177.9 127 67.7
arahy.Tifrunner.gnm1.ann1.XDA00H Arachis hypogaea HOM05D007312 ORTHO05D009209 4.8e-43 177.9 125 88.0
PGR042G3076 Punica granatum HOM05D007312 ORTHO05D009209 4.8e-43 177.9 127 70.1
Actinidia22408 Actinidia chinensis HOM05D007312 ORTHO05D009209 1.1e-42 176.8 127 67.7
Atru.chr10.560 Acer truncatum HOM05D007312 ORTHO05D009209 1.4e-42 176.4 127 68.5
AT1G31170 Arabidopsis thaliana HOM05D007312 ORTHO05D009209 1.4e-42 176.4 127 66.9
HanXRQChr12g0381571 Helianthus annuus HOM05D007312 ORTHO05D009209 1.4e-42 176.4 130 67.7
GSVIVG01012104001 Vitis vinifera HOM05D007312 ORTHO05D009209 1.4e-42 176.4 127 70.1
CARHR030640 Cardamine hirsuta HOM05D007312 ORTHO05D009209 2.4e-42 175.6 127 66.1
Peaxi162Scf00149g00224 Petunia axillaris HOM05D007312 ORTHO05D009209 2.4e-42 175.6 129 69.8
Solyc02g068710.3 Solanum lycopersicum HOM05D007312 ORTHO05D009209 2.4e-42 175.6 129 70.5
Nitab4.5_0001288g0230 Nicotiana tabacum HOM05D007312 ORTHO05D009209 3.1e-42 175.3 129 69.8
BcaB04g18176 Brassica carinata HOM05D007312 ORTHO05D009209 4.0e-42 174.9 128 67.2
SalBow8G4543 Salvia bowleyana HOM05D007312 ORTHO05D009209 4.0e-42 174.9 123 71.5
Ciclev10017175m.g Citrus clementina HOM05D007312 ORTHO05D009209 6.9e-42 174.1 131 67.9
Hma1.2p1_1005F.1_g246920 Hydrangea macrophylla HOM05D007312 ORTHO05D009209 9.0e-42 173.7 131 67.9
Thhalv10009117m.g Eutrema salsugineum HOM05D007312 ORTHO05D009209 1.2e-41 173.3 127 66.9
Lsat_1_v5_gn_3_106761 Lactuca sativa HOM05D007312 ORTHO05D009209 1.2e-41 173.3 127 66.9
MSTRG.7597 Avicennia marina HOM05D007312 ORTHO05D009209 2.0e-41 172.6 127 68.5
THA.LOC104798553 Tarenaya hassleriana HOM05D007312 ORTHO05D009209 2.6e-41 172.2 129 77.5
EL10Ac5g12681 Beta vulgaris HOM05D007312 ORTHO05D009209 3.4e-41 171.8 127 66.9
MELO3C021735.2 Cucumis melo HOM05D007312 ORTHO05D009209 3.4e-41 171.8 129 68.2
ECA234G3951 Erigeron canadensis HOM05D007312 ORTHO05D009209 3.4e-41 171.8 131 67.2
ClCG01G009570 Citrullus lanatus HOM05D007312 ORTHO05D009209 4.5e-41 171.4 129 68.2
Eucgr.E04250 Eucalyptus grandis HOM05D007312 ORTHO05D009209 4.5e-41 171.4 135 65.2
Carub.0001s2957 Capsella rubella HOM05D007312 ORTHO05D009209 9.9e-41 170.2 123 66.7
CsaV3_1G046220 Cucumis sativus L. HOM05D007312 ORTHO05D009209 1.3e-40 169.9 129 67.4
Sabra12G0094300 Salix brachista HOM05D007312 ORTHO05D009209 1.7e-40 169.5 123 69.9
Sp1g26990 Schrenkiella parvula HOM05D007312 ORTHO05D009209 1.7e-40 169.5 128 67.2
Os06g0174300 Oryza sativa ssp. japonica HOM05D007312 ORTHO05D009209 2.2e-40 169.1 89 86.5
unitig_32.g10991 Utricularia gibba HOM05D000532 ORTHO05D009209 3.8e-40 168.3 89 85.4
Lj2A350T56 Lonicera japonica HOM05D007312 ORTHO05D009209 4.9e-40 167.9 124 69.4
Psat7g129800 Pisum sativum HOM05D007312 ORTHO05D009209 4.9e-40 167.9 116 71.6
BcaC07g37774 Brassica carinata HOM05D007312 ORTHO05D009209 6.4e-40 167.5 123 66.7
Zm00001eb375250 Zea mays HOM05D007312 ORTHO05D009209 6.4e-40 167.5 89 86.5
MBI18_g11473_MAGBIO Magnolia biondii HOM05D007312 ORTHO05D009209 1.9e-39 166.0 89 84.3
Ah.01g020500 Amaranthus hybridus HOM05D007312 ORTHO05D009209 2.4e-39 165.6 122 68.0
arahy.Tifrunner.gnm1.ann1.FJ5394 Arachis hypogaea HOM05D007312 ORTHO05D009209 3.2e-39 165.2 89 88.8
PSO541G3426 Papaver somniferum HOM05D007312 ORTHO05D009209 3.2e-39 165.2 89 82.0
AUR62010557 Chenopodium quinoa HOM05D007312 ORTHO05D009209 5.4e-39 164.5 122 67.2
SGA_v2.0_scaffold298G47689 Striga asiatica HOM05D007312 ORTHO05D009209 5.4e-39 164.5 127 66.1
Migut.M01988 Erythranthe guttata HOM05D007312 ORTHO05D009209 7.1e-39 164.1 88 85.2
Hund14701 Selenicereus undatus HOM05D007312 ORTHO05D009209 7.1e-39 164.1 121 66.9
Aa31LG2G15110 Aethionema arabicum HOM05D007312 ORTHO05D009209 2.1e-38 162.5 89 84.3
vmacro03527 Vaccinium macrocarpon HOM05D007312 ORTHO05D009209 2.7e-38 162.2 84 88.1
Rhsim13G0146500 Rhododendron simsii HOM05D007312 ORTHO05D009209 6.0e-38 161.0 122 68.0
RhsimUnG0109200 Rhododendron simsii HOM05D007312 ORTHO05D009209 6.0e-38 161.0 122 68.0
Aqoxy1G01718 Aquilegia oxysepala HOM05D007312 ORTHO05D009209 2.3e-37 159.1 85 85.9
A08p10710 Brassica napus HOM05D007312 ORTHO05D009209 3.9e-37 158.3 124 65.3
BolC8t48163H Brassica oleracea HOM05D007312 ORTHO05D009209 3.9e-37 158.3 118 66.1
BraA08t33069Z Brassica rapa HOM05D007312 ORTHO05D009209 3.9e-37 158.3 124 65.3
CAN.G149.9 Capsicum annuum HOM05D007312 ORTHO05D009209 3.9e-37 158.3 84 85.7
CDE02G1125 Ceratophyllum demersum HOM05D007312 ORTHO05D009209 6.7e-37 157.5 89 79.8
AUR62017332 Chenopodium quinoa HOM05D007312 ORTHO05D009209 2.5e-36 155.6 122 64.8
Pp3c7_15740 Physcomitrium patens HOM05D007312 ORTHO05D009209 7.4e-36 154.1 89 78.7
Haze_06075 Corylus avellana HOM05D007312 ORTHO05D009209 3.7e-35 151.8 122 64.8
SMO145G0246 Selaginella moellendorffii HOM05D007312 ORTHO05D009209 4.0e-34 148.3 84 78.6
HPP92_010212 Vanilla planifolia HOM05D007312 ORTHO05D009209 4.0e-34 148.3 84 79.8
Nn7g38246 Nelumbo nucifera HOM05D007312 ORTHO05D009209 5.8e-33 144.4 127 61.4
RcHm_v2.0_Chr2g0126261 Rosa chinensis HOM05D007312 ORTHO05D009209 2.1e-30 136.0 85 77.6
Mapoly0066s0018 Marchantia polymorpha HOM05D007312 ORTHO05D009209 2.7e-30 135.6 141 51.1
Cre17.g729950 Chlamydomonas reinhardtii HOM05D007312 ORTHO05D009209 1.5e-28 129.8 85 70.6
CBR_g4 Chara braunii HOM05D007312 ORTHO05D009209 3.3e-28 128.6 85 69.4
Prupe.4G113200 Prunus persica HOM05D007312 ORTHO05D009209 1.1e-23 113.6 95 64.2
Dinv25919 Davidia involucrata HOM05D007312 ORTHO05D009209 1.8e-21 106.3 91 61.5
HPP92_010191 Vanilla planifolia HOM05D007312 ORTHO05D009209 2.3e-21 105.9 89 62.9
FAN25G0614 Fragaria x ananassa HOM05D007312 ORTHO05D009209 2.5e-20 102.4 97 71.1
Oeu056034.1 Olea europaea HOM05D007312 ORTHO05D009209 2.8e-19 99.0 89 60.7
FAN21G0246 Fragaria x ananassa HOM05D007312 ORTHO05D009209 1.5e-17 93.2 86 80.2
Cpa.g.sc5085.1 Carica papaya HOM05D007312 ORTHO05D009209 1.3e-16 90.1 79 60.8
FAN16G3369 Fragaria x ananassa HOM05D007312 ORTHO05D009209 1.3e-16 90.1 81 82.7
Sc01g0008940 Simmondsia chinensis HOM05D007312 ORTHO05D009209 1.3e-16 90.1 82 59.8
Thecc.02G008700 Theobroma cacao HOM05D007312 ORTHO05D009209 2.9e-16 89.0 84 59.5
Lalb_Chr09g0328681 Lupinus albus HOM05D007312 ORTHO05D009209 5.5e-15 84.7 41 85.4
Gorai.008G048300 Gossypium raimondii HOM05D007312 ORTHO05D009209 1.2e-14 83.6 81 56.8
Gohir.D12G045700 Gossypium hirsutum HOM05D007312 ORTHO05D009209 1.6e-14 83.2 81 56.8
ATR0752G167 Amborella trichopoda HOM05D007312 ORTHO05D009209 2.1e-14 82.8 52 73.1
COL.COLO4_17652 Corchorus olitorius HOM05D007312 ORTHO05D009209 2.3e-13 79.3 83 53.0
Sed0015339 Sechium edule HOM05D007312 ORTHO05D009209 3.3e-12 75.5 84 57.1
Lalb_Chr09g0328671 Lupinus albus HOM05D007312 ORTHO05D009209 2.2e-11 72.8 85 52.9
Sabra12G0063500 Salix brachista HOM05D007312 ORTHO05D009209 2.8e-11 72.4 41 82.9
Potri.015G124601 Populus trichocarpa HOM05D007312 ORTHO05D009209 1.3e-08 63.5 42 66.7


User provided reference genes

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