Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0384971 Lupinus albus HOM05D007595 ORTHO05D009570 7.5e-194 681.8 933 100.0
Lalb_Chr05g0219501 Lupinus albus HOM05D007595 ORTHO05D009570 6.5e-113 412.9 251 85.3
Lj1g0026949 Lotus japonicus HOM05D007595 ORTHO05D009570 4.8e-100 370.2 287 66.9
VMungo0251G3282 Vigna mungo HOM05D007595 ORTHO05D009570 5.9e-98 363.2 293 63.1
Glyma.07G218100 Glycine max HOM05D007595 ORTHO05D009570 2.2e-97 361.3 293 64.2
Phvul.002G094300 Phaseolus vulgaris HOM05D007595 ORTHO05D009570 5.5e-96 356.7 293 64.2
Psat3g072800 Pisum sativum HOM05D007595 ORTHO05D009570 1.1e-88 332.4 252 67.1
Atru.chr5.81 Acer truncatum HOM05D007595 ORTHO05D009570 1.8e-78 298.5 319 50.8
CiPaw.13G022600 Carya illinoinensis HOM05D007595 ORTHO05D009570 1.7e-76 292.0 295 55.3
TWI59G0156 Tripterygium wilfordii HOM05D007595 ORTHO05D009570 1.7e-76 292.0 301 53.2
Manes.01G274800 Manihot esculenta HOM05D007595 ORTHO05D009570 6.3e-76 290.0 298 53.0
Cfa011030 Carpinus fangiana HOM05D007595 ORTHO05D009570 8.2e-76 289.7 257 59.9
FvH4_5g25080 Fragaria vesca HOM05D007595 ORTHO05D009570 1.1e-75 289.3 264 58.0
FAN08G2497 Fragaria x ananassa HOM05D007595 ORTHO05D009570 1.1e-75 289.3 264 58.0
QL04p026468 Quercus lobata HOM05D007595 ORTHO05D009570 6.5e-73 280.0 289 53.6
Ciclev10018805m.g Citrus clementina HOM05D007595 ORTHO05D009570 1.9e-72 278.5 298 49.0
Medtr7g091470 Medicago truncatula HOM05D007595 ORTHO05D009570 1.9e-72 278.5 297 52.5
Sabra14G0039800 Salix brachista HOM05D007595 ORTHO05D009570 4.2e-72 277.3 255 57.6
Prupe.1G180300 Prunus persica HOM05D007595 ORTHO05D009570 5.5e-72 276.9 267 56.6
Duzib138G0502 Durio zibethinus HOM05D007595 ORTHO05D009570 9.4e-72 276.2 283 54.4
Potri.014G052800 Populus trichocarpa HOM05D007595 ORTHO05D009570 1.6e-71 275.4 282 54.3
Hund27417 Selenicereus undatus HOM05D007595 ORTHO05D009570 4.7e-71 273.9 259 54.4
Sc22g0000140 Simmondsia chinensis HOM05D007595 ORTHO05D009570 2.8e-68 264.6 267 53.2
Sc22g0001280 Simmondsia chinensis HOM05D007595 ORTHO05D009570 2.8e-68 264.6 267 53.2
Gohir.A12G098700 Gossypium hirsutum HOM05D007595 ORTHO05D009570 8.3e-68 263.1 247 54.7
ClCG05G002930 Citrullus lanatus HOM05D007595 ORTHO05D009570 5.4e-67 260.4 255 54.9
CANSAT54G2206 Cannabis sativa HOM05D007595 ORTHO05D009570 9.1e-67 259.6 250 54.0
MELO3C006272.2 Cucumis melo HOM05D007595 ORTHO05D009570 2.7e-66 258.1 258 52.7
Sed0013429 Sechium edule HOM05D007595 ORTHO05D009570 1.3e-65 255.8 283 50.9
CsaV3_3G010510 Cucumis sativus L. HOM05D007595 ORTHO05D009570 2.2e-65 255.0 269 51.3
Lsat_1_v5_gn_4_38381 Lactuca sativa HOM05D007595 ORTHO05D009570 2.9e-65 254.6 255 52.5
CANSAT25G1659 Cannabis sativa HOM05D007595 ORTHO05D009570 8.5e-65 253.1 249 54.2
THA.LOC104811608 Tarenaya hassleriana HOM05D007595 ORTHO05D009570 3.2e-64 251.1 247 52.2
SHI13644 Sapria himalayana HOM05D007595 ORTHO05D009570 7.2e-64 250.0 289 47.1
Ca_08452_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 8.0e-63 246.5 181 66.9
Ca_08455_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 8.0e-63 246.5 181 66.9
CANSAT78G1456 Cannabis sativa HOM05D007595 ORTHO05D009570 1.0e-62 246.1 249 54.6
vmacro09088 Vaccinium macrocarpon HOM05D007595 ORTHO05D009570 8.8e-62 243.0 248 54.4
Peaxi162Scf00793g00032 Petunia axillaris HOM05D007595 ORTHO05D009570 1.2e-61 242.7 294 49.7
Rhsim05G0178700 Rhododendron simsii HOM05D007595 ORTHO05D009570 7.5e-61 240.0 225 56.9
Sopen01g035520 Solanum pennellii HOM05D007595 ORTHO05D009570 2.2e-60 238.4 233 54.1
Cc02_g25530 Coffea canephora HOM05D007595 ORTHO05D009570 8.3e-60 236.5 207 58.0
Ah.08g212430 Amaranthus hybridus HOM05D007595 ORTHO05D009570 2.5e-56 224.9 185 61.1
CAN.G756.22 Capsicum annuum HOM05D007595 ORTHO05D009570 7.3e-56 223.4 222 55.0
MD02G1222500 Malus domestica HOM05D007595 ORTHO05D009570 2.1e-55 221.9 185 59.5
CDE04G2406 Ceratophyllum demersum HOM05D007595 ORTHO05D009570 3.6e-55 221.1 243 49.0
Haze_02895 Corylus avellana HOM05D007595 ORTHO05D009570 8.0e-55 219.9 177 63.3
COL.COLO4_12359 Corchorus olitorius HOM05D007595 ORTHO05D009570 3.0e-54 218.0 185 60.5
AUR62034666 Chenopodium quinoa HOM05D007595 ORTHO05D009570 5.2e-54 217.2 185 57.8
AUR62008574 Chenopodium quinoa HOM05D007595 ORTHO05D009570 8.9e-54 216.5 185 56.2
RcHm_v2.0_Chr7g0215291 Rosa chinensis HOM05D007595 ORTHO05D009570 2.0e-53 215.3 185 58.4
CSS0007679 Camellia sinensis var. sinensis HOM05D007595 ORTHO05D009570 2.6e-53 214.9 185 60.0
SalBow5G3719 Salvia bowleyana HOM05D007595 ORTHO05D009570 2.2e-52 211.8 262 46.6
MSTRG.20666 Avicennia marina HOM05D007595 ORTHO05D009570 1.4e-51 209.1 260 45.0
Lj9C550T12 Lonicera japonica HOM05D007595 ORTHO05D009570 7.0e-51 206.8 172 59.9
Glyma.20G014500 Glycine max HOM05D007595 ORTHO05D009570 1.6e-50 205.7 140 67.9
RcHm_v2.0_Chr4g0407101 Rosa chinensis HOM05D007595 ORTHO05D009570 1.6e-50 205.7 185 56.8
Migut.B01494 Erythranthe guttata HOM05D007595 ORTHO05D009570 3.5e-50 204.5 259 44.4
Oeu004640.1 Olea europaea HOM05D007595 ORTHO05D009570 1.0e-49 203.0 180 54.4
PGSC0003DMG400001689 Solanum tuberosum HOM05D007595 ORTHO05D009570 1.3e-49 202.6 182 58.8
Actinidia05786 Actinidia chinensis HOM05D003161 ORTHO05D009570 2.3e-49 201.8 180 57.8
Nitab4.5_0000563g0010 Nicotiana tabacum HOM05D007595 ORTHO05D009570 3.0e-49 201.4 230 52.6
MBI04_g20744_MAGBIO Magnolia biondii HOM05D000404 ORTHO05D001765 1.9e-48 198.7 281 44.1
EL10Ac7g17423 Beta vulgaris HOM05D007595 ORTHO05D009570 7.3e-48 196.8 185 53.5
SGA_v2.0_scaffold34G13580 Striga asiatica HOM05D007595 ORTHO05D009570 3.6e-47 194.5 293 39.2
PGR042G2115 Punica granatum HOM05D007595 ORTHO05D009570 1.1e-46 193.0 200 54.0
PSO675G4153 Papaver somniferum HOM05D007595 ORTHO05D009570 4.0e-46 191.0 262 43.1
Dinv44032 Davidia involucrata HOM05D007595 ORTHO05D009570 1.5e-45 189.1 188 53.7
PSO732G0035 Papaver somniferum HOM05D007595 ORTHO05D009570 6.4e-44 183.7 285 40.0
HanXRQChr14g0457401 Helianthus annuus HOM05D007595 ORTHO05D009570 8.3e-44 183.3 197 50.3
Nn1g00708 Nelumbo nucifera HOM05D007595 ORTHO05D009570 1.6e-42 179.1 186 52.7
PSO732G0412 Papaver somniferum HOM05D007595 ORTHO05D009570 2.3e-41 175.3 209 45.9
Nitab4.5_0004273g0020 Nicotiana tabacum HOM05D007595 ORTHO05D009570 1.5e-40 172.6 147 62.6
Aqoxy7G02148 Aquilegia oxysepala HOM05D007595 ORTHO05D009570 3.1e-38 164.9 240 43.3
DCAR_029507 Daucus carota HOM05D007595 ORTHO05D009570 1.2e-37 162.9 151 55.6
Aa31LG1G28920 Aethionema arabicum HOM05D007595 ORTHO05D009570 9.9e-37 159.8 141 56.7
TPR.G3705 Trifolium pratense HOM05D007595 ORTHO05D009570 3.7e-36 157.9 109 70.6
TAR629G2414 Trochodendron aralioides HOM05D007595 ORTHO05D009570 3.5e-34 151.4 123 62.6
Thecc.01G401700 Theobroma cacao HOM05D007595 ORTHO05D009570 3.0e-33 148.3 116 62.9
Gohir.D12G101900 Gossypium hirsutum HOM05D007595 ORTHO05D009570 1.1e-30 139.8 116 58.6
Rhsim07G0038800 Rhododendron simsii HOM05D007595 ORTHO05D009570 4.1e-27 127.9 149 47.0
ECA234G2641 Erigeron canadensis HOM05D007595 ORTHO05D009570 2.4e-22 112.1 117 47.0
GSVIVG01018339001 Vitis vinifera HOM05D007595 ORTHO05D009570 4.0e-22 111.3 90 58.9
RcHm_v2.0_Chr4g0407111 Rosa chinensis HOM05D007595 ORTHO05D009570 5.8e-21 107.5 90 56.7
Sabra14G0039700 Salix brachista HOM05D007595 ORTHO05D009570 2.2e-20 105.5 85 60.0
FAN18G0104 Fragaria x ananassa HOM05D007595 ORTHO05D009570 4.2e-19 101.3 84 60.7
Gorai.008G111100 Gossypium raimondii HOM05D007595 ORTHO05D009570 5.4e-19 100.9 90 55.6
MD07G1093100 Malus domestica HOM05D007595 ORTHO05D009570 1.2e-18 99.8 85 57.6
Cpa.g.sc52.75 Carica papaya HOM05D007595 ORTHO05D009570 3.9e-17 94.7 85 56.5
Solyc01g088670.3 Solanum lycopersicum HOM05D007595 ORTHO05D009570 6.6e-17 94.0 85 52.9
HPP92_014879 Vanilla planifolia HOM05D007595 ORTHO05D009570 4.3e-16 91.3 189 32.8
Cc11_g12050 Coffea canephora HOM05D007595 ORTHO05D009570 1.8e-14 85.9 78 52.6
Thhalv10003688m.g Eutrema salsugineum HOM05D007496 ORTHO05D009479 6.0e-10 70.9 199 22.6
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 5.1e-09 67.8 179 30.2
AT2G02150 Arabidopsis thaliana HOM05D007496 ORTHO05D009479 6.7e-09 67.4 174 25.3
Carub.0005s0122 Capsella rubella HOM05D007496 ORTHO05D009479 3.3e-08 65.1 177 23.7
Sp2g13565 Schrenkiella parvula HOM05D007496 ORTHO05D009479 7.4e-08 63.9 159 23.3
Sed0010805 Sechium edule HOM05D002890 ORTHO05D009847 1.3e-07 63.2 158 26.6
AL5G11430 Arabidopsis lyrata HOM05D007496 ORTHO05D009479 2.1e-07 62.4 180 23.3
Atru.chr2.3702 Acer truncatum HOM05D007390 ORTHO05D009114 2.8e-07 62.0 151 27.8
MELO3C035731.2 Cucumis melo HOM05D002890 ORTHO05D009847 2.8e-07 62.0 158 25.9
ClCG03G004730 Citrullus lanatus HOM05D002890 ORTHO05D009847 1.1e-06 60.1 158 25.3
Eucgr.D01185 Eucalyptus grandis HOM05D007595 ORTHO05D009570 1.4e-06 59.7 54 53.7
Gohir.A03G067600 Gossypium hirsutum HOM05D007763 ORTHO05D009537 1.4e-06 59.7 142 27.5
TAR624G0355 Trochodendron aralioides HOM05D002890 ORTHO05D009847 1.4e-06 59.7 178 22.5
TWI63G0498 Tripterygium wilfordii HOM05D002890 ORTHO05D009847 2.4e-06 58.9 158 21.5
SalBow5G0095 Salvia bowleyana HOM05D007545 ORTHO05D009579 5.3e-06 57.8 174 21.8
SEGI_19561 Sequoiadendron giganteum HOM05D007496 ORTHO05D009431 5.3e-06 57.8 96 30.2
Sc17g0007390 Simmondsia chinensis HOM05D002890 ORTHO05D009847 6.9e-06 57.4 220 23.2
CANSAT21G0576 Cannabis sativa HOM05D007496 ORTHO05D009479 9.0e-06 57.0 191 23.0
MELO3C025502.2 Cucumis melo HOM05D007763 ORTHO05D009537 9.0e-06 57.0 123 27.6
Sc12g0006490 Simmondsia chinensis HOM05D007763 ORTHO05D009537 9.0e-06 57.0 173 23.7


User provided reference genes

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