Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0384461 Lupinus albus HOM05D005198 ORTHO05D006839 1.7e-207 725.7 351 100.0
Lalb_Chr09g0328121 Lupinus albus HOM05D005198 ORTHO05D006839 1.0e-180 636.7 329 93.6
arahy.Tifrunner.gnm1.ann1.Q28JUU Arachis hypogaea HOM05D005198 ORTHO05D006839 7.7e-168 594.0 344 84.3
arahy.Tifrunner.gnm1.ann1.A4X0ZB Arachis hypogaea HOM05D005198 ORTHO05D006839 2.9e-167 592.0 329 87.2
Glyma.02G137200 Glycine max HOM05D005198 ORTHO05D006839 5.0e-167 591.3 329 85.4
Lj1g0021010 Lotus japonicus HOM05D005198 ORTHO05D006839 5.0e-167 591.3 329 85.4
Glyma.07G208200 Glycine max HOM05D005198 ORTHO05D006839 4.2e-166 588.2 329 85.4
VMungo0251G3269 Vigna mungo HOM05D005198 ORTHO05D006839 4.7e-165 584.7 329 84.2
Phvul.003G296400 Phaseolus vulgaris HOM05D005198 ORTHO05D006839 1.8e-164 582.8 329 84.8
TPR.G23517 Trifolium pratense HOM05D005198 ORTHO05D006839 3.3e-163 578.6 329 82.4
Medtr4g087280 Medicago truncatula HOM05D005198 ORTHO05D006839 1.2e-157 560.1 329 79.9
Psat7g121400 Pisum sativum HOM05D005198 ORTHO05D006839 5.2e-156 554.7 329 80.9
vmacro09048 Vaccinium macrocarpon HOM05D005198 ORTHO05D006839 4.1e-153 545.0 341 75.7
Haze_01365 Corylus avellana HOM05D005198 ORTHO05D006839 5.3e-153 544.7 331 77.0
GSVIVG01038139001 Vitis vinifera HOM05D005198 ORTHO05D006839 2.2e-151 539.3 325 77.8
Rhsim04G0106800 Rhododendron simsii HOM05D005198 ORTHO05D006839 5.0e-151 538.1 329 76.3
Prupe.1G207000 Prunus persica HOM05D005198 ORTHO05D006839 2.5e-150 535.8 329 77.5
MD15G1424000 Malus domestica HOM05D005198 ORTHO05D006839 2.7e-149 532.3 329 77.2
QL10p055731 Quercus lobata HOM05D005198 ORTHO05D006839 4.7e-149 531.6 329 75.1
Actinidia28982 Actinidia chinensis HOM05D005198 ORTHO05D006839 6.1e-149 531.2 329 76.0
TWI63G1273 Tripterygium wilfordii HOM05D005198 ORTHO05D006839 3.0e-148 528.9 329 76.9
Eucgr.H00311 Eucalyptus grandis HOM05D005198 ORTHO05D006839 4.0e-148 528.5 331 76.1
Hma1.2p1_0150F.1_g066860 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 6.8e-148 527.7 325 77.2
Potri.013G126300 Populus trichocarpa HOM05D005198 ORTHO05D006839 1.7e-146 523.1 329 73.9
Hma1.2p1_0150F.1_g066870 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 8.3e-146 520.8 325 76.0
PGR142G0872 Punica granatum HOM05D005198 ORTHO05D006839 1.1e-145 520.4 322 77.3
Ciclev10019752m.g Citrus clementina HOM05D005198 ORTHO05D006839 5.4e-145 518.1 329 74.5
Sc25g0002780 Simmondsia chinensis HOM05D005198 ORTHO05D006839 9.1e-145 517.3 347 71.2
Dinv07059 Davidia involucrata HOM05D005198 ORTHO05D006839 2.7e-144 515.8 329 76.0
TAR365G0102 Trochodendron aralioides HOM05D005198 ORTHO05D006839 2.7e-144 515.8 329 76.0
RcHm_v2.0_Chr2g0123631 Rosa chinensis HOM05D005198 ORTHO05D006839 3.5e-144 515.4 331 73.7
Sabra13G0105600 Salix brachista HOM05D005198 ORTHO05D006839 4.5e-144 515.0 329 72.6
Lj4A14T50 Lonicera japonica HOM05D005198 ORTHO05D006839 7.7e-144 514.2 329 73.6
CAN.G1411.3 Capsicum annuum HOM05D005198 ORTHO05D006839 1.0e-143 513.8 331 73.1
Manes.04G036150 Manihot esculenta HOM05D005198 ORTHO05D006839 1.0e-143 513.8 323 75.9
Sopen08g004940 Solanum pennellii HOM05D005198 ORTHO05D006839 1.7e-143 513.1 331 72.8
Solyc08g014060.4 Solanum lycopersicum HOM05D005198 ORTHO05D006839 2.9e-143 512.3 331 72.8
Cpa.g.sc9.361 Carica papaya HOM05D005198 ORTHO05D006839 5.0e-143 511.5 329 73.3
Thecc.01G302200 Theobroma cacao HOM05D005198 ORTHO05D006839 8.6e-143 510.8 329 74.8
Duzib151G0783 Durio zibethinus HOM05D005198 ORTHO05D006839 7.2e-142 507.7 329 74.2
Cc03_g14040 Coffea canephora HOM05D005198 ORTHO05D006839 1.4e-140 503.4 323 74.6
Gohir.A02G009975 Gossypium hirsutum HOM05D005198 ORTHO05D006839 1.4e-140 503.4 331 72.5
ClCG07G015220 Citrullus lanatus HOM05D005198 ORTHO05D006839 3.0e-140 502.3 330 73.3
SalBow3G0226 Salvia bowleyana HOM05D005198 ORTHO05D006839 4.0e-140 501.9 325 70.8
Aqoxy2G02750 Aquilegia oxysepala HOM05D005198 ORTHO05D006839 5.2e-140 501.5 328 72.9
AT1G73180 Arabidopsis thaliana HOM05D005198 ORTHO05D006839 5.2e-140 501.5 325 71.7
Thhalv10018413m.g Eutrema salsugineum HOM05D005198 ORTHO05D006839 6.8e-140 501.1 325 71.7
FAN26G1320 Fragaria x ananassa HOM05D005198 ORTHO05D006839 8.9e-140 500.7 323 72.1
Gorai.005G012500 Gossypium raimondii HOM05D005198 ORTHO05D006839 1.2e-139 500.4 331 72.2
CARHR066180 Cardamine hirsuta HOM05D005198 ORTHO05D006839 1.5e-139 500.0 325 70.8
Oeu020813.1 Olea europaea HOM05D005198 ORTHO05D006839 1.5e-139 500.0 331 71.0
Sp5g28150 Schrenkiella parvula HOM05D005198 ORTHO05D006839 3.4e-139 498.8 325 71.4
Gohir.D02G010200 Gossypium hirsutum HOM05D005198 ORTHO05D006839 4.4e-139 498.4 331 71.9
THA.LOC104813938 Tarenaya hassleriana HOM05D005198 ORTHO05D006839 5.7e-139 498.0 323 71.8
ECA232G1195 Erigeron canadensis HOM05D005198 ORTHO05D006839 9.8e-139 497.3 345 68.4
Atru.BG.83.p Acer truncatum HOM05D005198 ORTHO05D006839 1.3e-138 496.9 318 74.5
FAN28G0627 Fragaria x ananassa HOM05D005198 ORTHO05D006839 1.3e-138 496.9 321 71.7
CANSAT11G2028 Cannabis sativa HOM05D005198 ORTHO05D006839 1.7e-138 496.5 322 73.3
Carub.0002s1997 Capsella rubella HOM05D005198 ORTHO05D006839 4.9e-138 495.0 325 70.5
Migut.G01222 Erythranthe guttata HOM05D005198 ORTHO05D006839 4.9e-138 495.0 331 68.6
AUR62002390 Chenopodium quinoa HOM05D005198 ORTHO05D006839 8.3e-138 494.2 329 70.2
Aa31LG4G3470 Aethionema arabicum HOM05D005198 ORTHO05D006839 2.4e-137 492.7 325 70.2
AL2G32950 Arabidopsis lyrata HOM05D005198 ORTHO05D006839 2.4e-137 492.7 325 70.2
Sed0009334 Sechium edule HOM05D005198 ORTHO05D006839 2.4e-137 492.7 332 71.7
MELO3C017760.2 Cucumis melo HOM05D005198 ORTHO05D006839 2.7e-136 489.2 330 70.6
Lsat_1_v5_gn_9_61481 Lactuca sativa HOM05D005198 ORTHO05D006839 5.0e-135 485.0 316 71.8
PSO732G0749 Papaver somniferum HOM05D005198 ORTHO05D006839 2.1e-133 479.6 329 69.0
PSO675G4502 Papaver somniferum HOM05D005198 ORTHO05D006839 2.8e-133 479.2 329 69.3
COL.COLO4_23329 Corchorus olitorius HOM05D005198 ORTHO05D006839 4.7e-133 478.4 343 68.2
Ah.13g073540 Amaranthus hybridus HOM05D005198 ORTHO05D006839 1.0e-132 477.2 329 67.8
BolC6t38540H Brassica oleracea HOM05D005198 ORTHO05D006839 1.8e-132 476.5 326 69.0
A07p29920 Brassica napus HOM05D005198 ORTHO05D006839 4.0e-132 475.3 326 68.7
BraA07t30630Z Brassica rapa HOM05D005198 ORTHO05D006839 8.9e-132 474.2 326 68.4
C06p34190 Brassica napus HOM05D005198 ORTHO05D006839 2.2e-130 469.5 326 68.4
AUR62023798 Chenopodium quinoa HOM05D005198 ORTHO05D006839 2.9e-130 469.2 316 70.6
ATR0733G245 Amborella trichopoda HOM05D005198 ORTHO05D006839 1.3e-127 460.3 325 66.5
CsaV3_4G002810 Cucumis sativus L. HOM05D005198 ORTHO05D006839 2.3e-127 459.5 381 61.4
unitig_92.g28215 Utricularia gibba HOM05D005198 ORTHO05D006839 7.3e-126 454.5 313 67.4
CDE04G2667 Ceratophyllum demersum HOM05D005198 ORTHO05D006839 2.2e-122 443.0 320 67.5
Nitab4.5_0011921g0010 Nicotiana tabacum HOM05D005198 ORTHO05D006839 4.9e-122 441.8 336 64.0
Peaxi162Scf00075g01544 Petunia axillaris HOM05D005198 ORTHO05D006839 1.1e-121 440.7 293 71.3
Hund03196 Selenicereus undatus HOM05D005198 ORTHO05D006839 1.1e-118 430.6 329 63.5
FvH4_1g25500 Fragaria vesca HOM05D005198 ORTHO05D006839 1.5e-118 430.3 289 70.2
HanXRQChr15g0483441 Helianthus annuus HOM05D005198 ORTHO05D006839 1.9e-118 429.9 278 72.7
BcaC08g45664 Brassica carinata HOM05D005198 ORTHO05D006839 9.5e-118 427.6 325 64.6
Zm00001eb246620 Zea mays HOM05D005198 ORTHO05D006839 1.2e-117 427.2 327 58.7
MBI11_g23940_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 2.8e-117 426.0 287 71.4
FAN23G1744 Fragaria x ananassa HOM05D005198 ORTHO05D006839 8.1e-117 424.5 285 70.2
FAN19G2119 Fragaria x ananassa HOM05D005198 ORTHO05D006839 1.8e-116 423.3 287 70.0
CSS0046337 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 2.3e-116 422.9 272 75.0
Nitab4.5_0000122g0140 Nicotiana tabacum HOM05D005198 ORTHO05D006839 2.0e-115 419.9 277 72.6
SGA_v2.0_scaffold12G06184 Striga asiatica HOM05D005198 ORTHO05D006839 1.7e-114 416.8 307 65.1
EL10Ac3g06083 Beta vulgaris HOM05D005198 ORTHO05D006839 3.7e-114 415.6 295 67.5
Eucgr.L01724 Eucalyptus grandis HOM05D005198 ORTHO05D006839 1.9e-113 413.3 285 71.6
DCAR_027527 Daucus carota HOM05D005198 ORTHO05D006839 5.6e-110 401.7 289 65.7
CSS0050366 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 9.6e-110 401.0 272 72.4
Pp3c6_14240 Physcomitrium patens HOM05D005198 ORTHO05D006839 2.1e-109 399.8 324 59.0
Mapoly0011s0080 Marchantia polymorpha HOM05D005198 ORTHO05D006839 1.4e-108 397.1 325 58.5
Atru.chr4.1402 Acer truncatum HOM05D005198 ORTHO05D006839 2.4e-108 396.4 262 72.5
Dinv33201 Davidia involucrata HOM05D005198 ORTHO05D006839 1.5e-99 367.1 201 86.6
Eucgr.H00310 Eucalyptus grandis HOM05D005198 ORTHO05D006839 9.9e-99 364.4 325 58.8
Ca_25383_v3 Cicer arietinum L. HOM05D005198 ORTHO05D006839 4.9e-98 362.1 198 87.9
CiPaw.02G100600 Carya illinoinensis HOM05D005198 ORTHO05D006839 6.6e-95 351.7 203 79.8
CBR_g53754 Chara braunii HOM05D005198 ORTHO05D006839 6.2e-93 345.1 330 50.3
Nn1g09646 Nelumbo nucifera HOM05D005198 ORTHO05D006839 2.4e-92 343.2 197 82.7
SMO145G0177 Selaginella moellendorffii HOM05D005198 ORTHO05D006839 1.7e-90 337.0 322 50.0
AagrBONN_evm.TU.Sc2ySwM_228.1363 Anthoceros agrestis HOM05D005198 ORTHO05D006839 4.9e-82 308.9 288 53.5
SEGI_32957 Sequoiadendron giganteum HOM05D005198 ORTHO05D006839 8.4e-74 281.6 185 67.6
PRCOL_00000684 Prasinoderma coloniale HOM05D005198 ORTHO05D006839 2.7e-64 250.0 299 41.5
Ca_18641_v3 Cicer arietinum L. HOM05D005198 ORTHO05D006839 1.4e-57 227.6 133 79.7
SHI30329 Sapria himalayana HOM05D005198 ORTHO05D000023 9.1e-52 208.4 144 68.1
MCO01G167 Micromonas commoda HOM05D005198 ORTHO05D006839 1.0e-50 204.9 301 37.2
Cre08.g375900 Chlamydomonas reinhardtii HOM05D005198 ORTHO05D006839 1.9e-49 200.7 299 37.1
Hma1.2p1_0554F.1_g177930 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 4.7e-48 196.1 125 74.4
CAN.G256.23 Capsicum annuum HOM05D005198 ORTHO05D006839 1.1e-46 191.4 152 57.9
SHI30330 Sapria himalayana HOM05D000105 ORTHO05D000023 1.8e-44 184.1 199 48.7
Nitab4.5_0009616g0020 Nicotiana tabacum HOM05D005198 ORTHO05D006839 5.0e-42 176.0 100 83.0
BolC3t18675H Brassica oleracea HOM05D005198 ORTHO05D006839 8.3e-29 132.1 112 58.0
SEGI_27162 Sequoiadendron giganteum HOM05D005198 ORTHO05D006839 1.2e-27 128.3 126 48.4
MBI14_g40932_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 1.0e-26 125.2 114 55.3
Psat1g217120 Pisum sativum HOM05D005198 ORTHO05D006839 1.2e-22 111.7 66 80.3
Glyma.03G132500 Glycine max HOM05D005198 ORTHO05D006839 1.3e-18 98.2 76 64.5
MBI11_g30564_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 1.7e-18 97.8 59 78.0
MBI03_g14783_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 2.3e-15 87.4 59 71.2
Dinv33202 Davidia involucrata HOM05D005198 ORTHO05D006839 2.6e-14 84.0 55 72.7
MBI07_g28641_MAGBIO Magnolia biondii HOM05D000992 ORTHO05D001928 4.9e-13 79.7 56 69.6
Lj3g0007177 Lotus japonicus HOM05D005198 ORTHO05D006839 1.9e-12 77.8 33 97.0
Lj6g0012253 Lotus japonicus HOM05D005198 ORTHO05D006839 1.9e-12 77.8 33 97.0
COL.COLO4_29149 Corchorus olitorius HOM05D005198 ORTHO05D006839 3.2e-12 77.0 80 55.0
SGA_v2.0_scaffold130G34334 Striga asiatica HOM05D005198 ORTHO05D006839 3.3e-09 67.0 72 48.6


User provided reference genes

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