Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0383911 Lupinus albus HOM05D007298 ORTHO05D009226 4.5e-158 561.2 288 100.0
Lalb_Chr09g0327771 Lupinus albus HOM05D007298 ORTHO05D009226 4.3e-116 421.8 290 79.0
Lalb_Chr05g0218531 Lupinus albus HOM05D007298 ORTHO05D009226 2.8e-115 419.1 289 78.9
Lj4g0005920 Lotus japonicus HOM05D007298 ORTHO05D009226 4.2e-103 378.6 291 73.9
Psat7g113280 Pisum sativum HOM05D007298 ORTHO05D009226 7.9e-94 347.8 293 70.0
TPR.G16338 Trifolium pratense HOM05D007298 ORTHO05D009226 8.7e-93 344.4 295 69.8
Phvul.002G230700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 1.6e-91 340.1 292 69.5
VMungo0251G1522 Vigna mungo HOM05D007298 ORTHO05D009226 3.7e-91 339.0 294 69.0
Medtr4g088515 Medicago truncatula HOM05D000062 ORTHO05D000043 2.1e-86 323.2 281 69.8
Ca_18576_v3 Cicer arietinum L. HOM05D007298 ORTHO05D009226 1.3e-83 313.9 285 65.6
Glyma.07G199400 Glycine max HOM05D007298 ORTHO05D009226 1.4e-79 300.4 299 65.9
arahy.Tifrunner.gnm1.ann1.IS7ZQD Arachis hypogaea HOM05D002349 ORTHO05D002464 1.2e-73 280.8 291 60.1
arahy.Tifrunner.gnm1.ann1.MB6W4F Arachis hypogaea HOM05D002349 ORTHO05D002464 1.2e-73 280.8 291 60.1
Glyma.13G177000 Glycine max HOM05D007298 ORTHO05D009226 1.5e-73 280.4 299 61.9
CiPaw.13G179900 Carya illinoinensis HOM05D007298 ORTHO05D009226 1.0e-72 277.7 278 58.6
Thecc.03G118900 Theobroma cacao HOM05D007298 ORTHO05D009226 2.2e-67 260.0 294 52.4
Cfa009528 Carpinus fangiana HOM05D007298 ORTHO05D009226 4.1e-66 255.8 281 55.2
COL.COLO4_37432 Corchorus olitorius HOM05D007298 ORTHO05D009226 4.1e-66 255.8 303 52.1
Duzib205G1649 Durio zibethinus HOM05D007298 ORTHO05D009226 1.3e-64 250.8 292 52.4
Potri.001G001000 Populus trichocarpa HOM05D007298 ORTHO05D009226 1.6e-62 243.8 274 53.3
Hma1.2p1_1436F.1_g283160 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 7.9e-62 241.5 284 54.2
Sabra01G0000900 Salix brachista HOM05D007298 ORTHO05D009226 1.0e-61 241.1 289 51.9
Gohir.A12G186800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 1.8e-61 240.4 294 50.0
Gohir.D12G189800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 2.3e-61 240.0 292 49.7
Gorai.008G203600 Gossypium raimondii HOM05D007298 ORTHO05D009226 1.5e-60 237.3 292 49.0
MBI13_g02430_MAGBIO Magnolia biondii HOM05D007298 ORTHO05D009226 1.3e-59 234.2 287 52.3
vmacro16084 Vaccinium macrocarpon HOM05D007298 ORTHO05D009226 2.4e-58 229.9 280 50.7
TAR623G1587 Trochodendron aralioides HOM05D007298 ORTHO05D009226 4.1e-58 229.2 282 50.7
QL01p007822 Quercus lobata HOM05D007298 ORTHO05D009226 2.6e-57 226.5 269 52.0
CsaV3_1G001220 Cucumis sativus L. HOM05D007298 ORTHO05D009226 5.9e-57 225.3 287 50.2
ClCG06G017280 Citrullus lanatus HOM05D007298 ORTHO05D009226 1.3e-56 224.2 286 49.0
MELO3C026268.2 Cucumis melo HOM05D007298 ORTHO05D009226 6.5e-56 221.9 287 49.5
Sed0017427 Sechium edule HOM05D007298 ORTHO05D009226 1.9e-55 220.3 286 47.6
Nn2g15906 Nelumbo nucifera HOM05D007298 ORTHO05D009226 5.5e-55 218.8 302 47.7
PGR119G1464 Punica granatum HOM05D007298 ORTHO05D009226 5.5e-55 218.8 286 48.3
Actinidia30606 Actinidia chinensis HOM05D007298 ORTHO05D009226 6.1e-54 215.3 290 46.6
Cc11_g17470 Coffea canephora HOM05D007298 ORTHO05D009226 1.0e-53 214.5 283 47.0
Aqoxy2G04036 Aquilegia oxysepala HOM05D007298 ORTHO05D009226 5.2e-53 212.2 280 48.6
Nitab4.5_0007554g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 1.5e-52 210.7 275 46.9
Nn7g35796 Nelumbo nucifera HOM05D007298 ORTHO05D009226 4.4e-52 209.1 286 48.6
CSS0015764 Camellia sinensis var. sinensis HOM05D007298 ORTHO05D009226 5.7e-52 208.8 282 47.5
Peaxi162Scf00128g01770 Petunia axillaris HOM05D007298 ORTHO05D009226 2.2e-51 206.8 285 44.9
TWI32G0891 Tripterygium wilfordii HOM05D007298 ORTHO05D009226 1.1e-50 204.5 269 50.6
Sc05g0003880 Simmondsia chinensis HOM05D007298 ORTHO05D009226 1.8e-50 203.8 294 46.6
Ciclev10017525m.g Citrus clementina HOM05D007298 ORTHO05D009226 3.1e-50 203.0 254 50.8
PGSC0003DMG400025413 Solanum tuberosum HOM05D007298 ORTHO05D009226 3.1e-50 203.0 280 46.4
Rhsim12G0097800 Rhododendron simsii HOM05D007298 ORTHO05D009226 4.1e-50 202.6 273 45.8
Haze_22918 Corylus avellana HOM05D007298 ORTHO05D009226 5.3e-50 202.2 285 49.1
Nitab4.5_0008442g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 4.5e-49 199.1 288 43.1
Sopen05g018720 Solanum pennellii HOM05D007298 ORTHO05D009226 2.9e-48 196.4 272 46.3
Nitab4.5_0001600g0070 Nicotiana tabacum HOM05D005538 ORTHO05D007055 1.9e-47 193.7 261 45.2
Solyc05g024020.1 Solanum lycopersicum HOM05D007298 ORTHO05D009226 9.4e-47 191.4 269 46.8
Eucgr.J01725 Eucalyptus grandis HOM05D007298 ORTHO05D009226 8.0e-46 188.3 281 48.0
MD11G1000700 Malus domestica HOM05D007298 ORTHO05D009226 8.0e-46 188.3 284 46.8
RcHm_v2.0_Chr5g0084091 Rosa chinensis HOM05D007298 ORTHO05D009226 6.8e-45 185.3 276 46.7
Migut.K01030 Erythranthe guttata HOM05D007298 ORTHO05D009226 1.5e-44 184.1 281 44.8
FvH4_3g45980 Fragaria vesca HOM05D007298 ORTHO05D009226 9.8e-44 181.4 319 42.9
FAN16G2589 Fragaria x ananassa HOM05D007298 ORTHO05D009226 2.2e-43 180.3 318 42.1
AUR62008624 Chenopodium quinoa HOM05D007298 ORTHO05D009226 4.8e-43 179.1 249 46.6
Duzib084G1143 Durio zibethinus HOM05D007298 ORTHO05D009226 8.3e-43 178.3 225 53.8
Actinidia09612 Actinidia chinensis HOM05D007298 ORTHO05D009226 3.5e-41 172.9 279 43.7
AUR62033147 Chenopodium quinoa HOM05D007298 ORTHO05D009226 2.9e-40 169.9 236 48.7
Prupe.6G001000 Prunus persica HOM05D007298 ORTHO05D009226 2.5e-39 166.8 282 44.3
EL10Ac4g07728 Beta vulgaris HOM05D007298 ORTHO05D009226 7.2e-39 165.2 252 44.4
Glyma.15G076400 Glycine max HOM05D007298 ORTHO05D009226 4.7e-38 162.5 222 51.8
FAN11G2203 Fragaria x ananassa HOM05D007298 ORTHO05D009226 8.0e-38 161.8 303 41.9
Ah.08g213460 Amaranthus hybridus HOM05D007298 ORTHO05D009226 1.4e-37 161.0 277 41.5
FAN21G1139 Fragaria x ananassa HOM05D007298 ORTHO05D009226 1.4e-37 161.0 303 41.3
FAN25G2175 Fragaria x ananassa HOM05D007298 ORTHO05D009226 5.2e-37 159.1 296 41.6
Dinv31519 Davidia involucrata HOM05D007298 ORTHO05D009226 8.8e-37 158.3 258 46.5
Sed0020092 Sechium edule HOM05D007298 ORTHO05D009226 3.4e-36 156.4 230 47.8
Manes.15G111000 Manihot esculenta HOM05D007298 ORTHO05D009226 4.4e-36 156.0 245 45.7
HanXRQChr12g0385721 Helianthus annuus HOM05D007298 ORTHO05D009226 9.8e-36 154.8 206 46.1
THA.LOC104813474 Tarenaya hassleriana HOM05D007298 ORTHO05D009226 6.3e-35 152.1 305 41.0
A03p56680 Brassica napus HOM05D007298 ORTHO05D009226 5.4e-34 149.1 306 38.6
BraA03t14738Z Brassica rapa HOM05D007298 ORTHO05D009226 5.4e-34 149.1 306 38.6
Lsat_1_v5_gn_4_2201 Lactuca sativa HOM05D007298 ORTHO05D009226 5.4e-34 149.1 206 45.6
C07p54880 Brassica napus HOM05D007298 ORTHO05D009226 9.2e-34 148.3 307 38.1
BolC7t45976H Brassica oleracea HOM05D007298 ORTHO05D009226 9.2e-34 148.3 307 38.1
DCAR_006996 Daucus carota HOM05D007298 ORTHO05D009226 2.7e-33 146.7 283 40.6
Sp7g24320 Schrenkiella parvula HOM05D007298 ORTHO05D009226 7.8e-33 145.2 292 41.1
SGA_v2.0_scaffold9G04794 Striga asiatica HOM05D002076 ORTHO05D002087 7.8e-33 145.2 233 41.2
Glyma.13G237100 Glycine max HOM05D007298 ORTHO05D009226 1.0e-32 144.8 130 66.9
AT4G26415 Arabidopsis thaliana HOM05D007298 ORTHO05D009226 2.3e-32 143.7 303 40.3
BcaC06g32750 Brassica carinata HOM05D007298 ORTHO05D009226 3.8e-32 142.9 270 40.0
Hma1.2p1_0459F.1_g157260 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 3.8e-32 142.9 241 46.1
ATR0068G085 Amborella trichopoda HOM05D007298 ORTHO05D009226 1.5e-31 141.0 350 34.6
Carub.0007s1454 Capsella rubella HOM05D007298 ORTHO05D009226 1.5e-31 141.0 301 39.9
CARHR233970 Cardamine hirsuta HOM05D007298 ORTHO05D009226 7.3e-31 138.7 308 39.6
AL7G26540 Arabidopsis lyrata HOM05D007298 ORTHO05D009226 1.2e-30 137.9 284 40.1
CANSAT11G1103 Cannabis sativa HOM05D007298 ORTHO05D009226 1.2e-30 137.9 228 47.8
unitig_22.g6385 Utricularia gibba HOM05D007298 ORTHO05D009226 3.6e-30 136.3 204 43.1
Thhalv10026008m.g Eutrema salsugineum HOM05D007298 ORTHO05D009226 6.1e-30 135.6 289 39.8
Cpa.g.sc119.13 Carica papaya HOM05D007298 ORTHO05D009226 1.8e-29 134.0 265 40.4
DCAR_006994 Daucus carota HOM05D007298 ORTHO05D009226 3.0e-29 133.3 269 40.1
SalBow2G0405 Salvia bowleyana HOM05D007298 ORTHO05D009226 5.2e-29 132.5 265 38.1
SalBow2G1404 Salvia bowleyana HOM05D007298 ORTHO05D009226 5.2e-29 132.5 265 38.1
BcaNung02423 Brassica carinata HOM05D007298 ORTHO05D009226 9.8e-28 128.3 290 38.3
Zm00001eb127960 Zea mays HOM05D007298 ORTHO05D009226 1.8e-26 124.0 261 39.1
Phvul.006G183700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 5.4e-26 122.5 217 43.8
CDE07G0295 Ceratophyllum demersum HOM05D000114 ORTHO05D000038 3.1e-13 80.1 119 43.7
Nitab4.5_0000340g0060 Nicotiana tabacum HOM05D007298 ORTHO05D009226 9.8e-12 75.1 98 43.9
SEGI_13333 Sequoiadendron giganteum HOM05D007298 ORTHO05D009226 4.3e-07 59.7 171 31.0


User provided reference genes

Program Settings