Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0383721 Lupinus albus HOM05D007781 ORTHO05D009769 1.0e-38 163.7 139 100.0
TAR627G0113 Trochodendron aralioides HOM05D007781 ORTHO05D009769 1.7e-17 93.2 95 77.9
Glyma.07G196200 Glycine max HOM05D007781 ORTHO05D009769 2.9e-17 92.4 97 73.2
Lj4g0009430 Lotus japonicus HOM05D007781 ORTHO05D009769 3.8e-17 92.0 95 74.7
Psat7g113680 Pisum sativum HOM05D007781 ORTHO05D009769 7.1e-16 87.8 96 71.9
TPR.G12128 Trifolium pratense HOM05D007781 ORTHO05D009769 1.6e-15 86.7 96 70.8
arahy.Tifrunner.gnm1.ann1.KV0YZV Arachis hypogaea HOM05D007781 ORTHO05D009769 3.5e-15 85.5 92 76.1
arahy.Tifrunner.gnm1.ann1.QC0LUE Arachis hypogaea HOM05D007781 ORTHO05D009769 3.5e-15 85.5 92 76.1
Ciclev10017149m.g Citrus clementina HOM05D007781 ORTHO05D009769 6.0e-15 84.7 94 72.3
CiPaw.09G059400 Carya illinoinensis HOM05D007781 ORTHO05D009769 1.0e-14 84.0 100 70.0
Hma1.2p1_0126F.1_g059410 Hydrangea macrophylla HOM05D007781 ORTHO05D009769 1.0e-14 84.0 95 70.5
Lsat_1_v5_gn_7_21141 Lactuca sativa HOM05D007781 ORTHO05D009769 1.0e-14 84.0 91 73.6
Thecc.06G188400 Theobroma cacao HOM05D007781 ORTHO05D009769 1.0e-14 84.0 93 67.7
MD10G1295400 Malus domestica HOM05D007781 ORTHO05D009769 1.3e-14 83.6 94 71.3
Phvul.002G234100 Phaseolus vulgaris HOM05D007781 ORTHO05D009769 1.3e-14 83.6 89 71.9
Dinv40553 Davidia involucrata HOM05D007781 ORTHO05D009769 2.3e-14 82.8 89 73.0
Gorai.009G169900 Gossypium raimondii HOM05D007781 ORTHO05D009769 2.3e-14 82.8 98 64.3
MD05G1313200 Malus domestica HOM05D007781 ORTHO05D009769 2.3e-14 82.8 94 70.2
RcHm_v2.0_Chr5g0008291 Rosa chinensis HOM05D007781 ORTHO05D009769 2.3e-14 82.8 90 72.2
Gohir.A05G161900 Gossypium hirsutum HOM05D007781 ORTHO05D009769 3.0e-14 82.4 93 66.7
Gohir.D05G164700 Gossypium hirsutum HOM05D007781 ORTHO05D009769 3.0e-14 82.4 93 66.7
Cc02_g13310 Coffea canephora HOM05D007781 ORTHO05D009769 3.9e-14 82.0 98 71.4
Duzib235G1462 Durio zibethinus HOM05D007781 ORTHO05D009769 3.9e-14 82.0 90 70.0
FvH4_3g09310 Fragaria vesca HOM05D007781 ORTHO05D009769 6.6e-14 81.3 90 72.2
FAN11G2776 Fragaria x ananassa HOM05D007781 ORTHO05D009769 6.6e-14 81.3 90 72.2
FAN16G0963 Fragaria x ananassa HOM05D007781 ORTHO05D009769 6.6e-14 81.3 90 72.2
FAN21G0375 Fragaria x ananassa HOM05D007781 ORTHO05D009769 6.6e-14 81.3 90 72.2
COL.COLO4_31480 Corchorus olitorius HOM05D007781 ORTHO05D009769 1.1e-13 80.5 92 64.1
Nn1g06568 Nelumbo nucifera HOM05D007781 ORTHO05D009769 1.5e-13 80.1 94 70.2
VMungo0251G3178 Vigna mungo HOM05D007781 ORTHO05D009769 1.9e-13 79.7 89 69.7
Actinidia05631 Actinidia chinensis HOM05D007781 ORTHO05D009769 2.5e-13 79.3 88 75.0
Prupe.4G046600 Prunus persica HOM05D007781 ORTHO05D009769 7.3e-13 77.8 95 68.4
GSVIVG01003209001 Vitis vinifera HOM05D007781 ORTHO05D009769 7.3e-13 77.8 83 77.1
Sc17g0006220 Simmondsia chinensis HOM05D007781 ORTHO05D009769 1.3e-12 77.0 95 68.4
Nitab4.5_0003432g0040 Nicotiana tabacum HOM05D007781 ORTHO05D009769 2.8e-12 75.9 94 70.2
Nitab4.5_0007940g0030 Nicotiana tabacum HOM05D007781 ORTHO05D009769 3.6e-12 75.5 98 68.4
PGR042G1810 Punica granatum HOM05D007781 ORTHO05D009769 4.8e-12 75.1 90 71.1
CDE10G1000 Ceratophyllum demersum HOM05D007781 ORTHO05D009769 8.1e-12 74.3 90 71.1
Sed0016416 Sechium edule HOM05D007781 ORTHO05D009769 8.1e-12 74.3 93 68.8
HanXRQChr04g0124061 Helianthus annuus HOM05D007781 ORTHO05D009769 1.4e-11 73.6 86 73.3
ECA236G0601 Erigeron canadensis HOM05D007781 ORTHO05D009769 2.4e-11 72.8 86 74.4
PGSC0003DMG400029720 Solanum tuberosum HOM05D007781 ORTHO05D009769 2.4e-11 72.8 83 75.9
THA.LOC104812795 Tarenaya hassleriana HOM05D007781 ORTHO05D009769 2.4e-11 72.8 94 67.0
CAN.G1164.27 Capsicum annuum HOM05D007781 ORTHO05D009769 3.1e-11 72.4 83 77.1
ClCG03G006020 Citrullus lanatus HOM05D007781 ORTHO05D009769 6.9e-11 71.2 95 65.3
A08p15070 Brassica napus HOM05D007781 ORTHO05D009769 9.0e-11 70.9 81 75.3
C03p83160 Brassica napus HOM05D001541 ORTHO05D009769 9.0e-11 70.9 81 75.3
HPP92_027869 Vanilla planifolia HOM05D007781 ORTHO05D009769 9.0e-11 70.9 91 64.8
MSTRG.14698 Avicennia marina HOM05D007781 ORTHO05D009769 1.5e-10 70.1 97 67.0
CARHR228320 Cardamine hirsuta HOM05D007781 ORTHO05D009769 2.0e-10 69.7 81 71.6
CsaV3_1G012280 Cucumis sativus L. HOM05D007781 ORTHO05D009769 2.0e-10 69.7 91 65.9
Sopen02g023130 Solanum pennellii HOM05D007781 ORTHO05D009769 2.0e-10 69.7 83 74.7
Potri.004G043100 Populus trichocarpa HOM05D007781 ORTHO05D009769 2.6e-10 69.3 81 72.8
Sp7g19740 Schrenkiella parvula HOM05D007781 ORTHO05D009769 2.6e-10 69.3 93 68.8
Sabra04G0026700 Salix brachista HOM05D007781 ORTHO05D009769 3.4e-10 68.9 81 72.8
Aa31LG6G3610 Aethionema arabicum HOM05D007781 ORTHO05D009769 4.4e-10 68.6 83 73.5
DCAR_028076 Daucus carota HOM05D007781 ORTHO05D009769 4.4e-10 68.6 46 67.4
CANSAT35G1759 Cannabis sativa HOM05D007781 ORTHO05D009769 5.8e-10 68.2 89 69.7
Thhalv10026412m.g Eutrema salsugineum HOM05D007781 ORTHO05D009769 5.8e-10 68.2 81 74.1
Hund21227 Selenicereus undatus HOM05D007781 ORTHO05D009769 5.8e-10 68.2 95 65.3
MELO3C002600.2 Cucumis melo HOM05D007781 ORTHO05D009769 9.9e-10 67.4 91 65.9
Oeu053970.1 Olea europaea HOM05D007781 ORTHO05D009769 1.3e-09 67.0 90 66.7
BcaB03g11687 Brassica carinata HOM05D001738 ORTHO05D001644 1.7e-09 66.6 83 72.3
CDE10G0168 Ceratophyllum demersum HOM05D007781 ORTHO05D009769 2.2e-09 66.2 78 73.1
Eucgr.E03314 Eucalyptus grandis HOM05D007781 ORTHO05D009769 2.9e-09 65.9 93 61.3
unitig_744.g24534 Utricularia gibba HOM05D007781 ORTHO05D009769 2.9e-09 65.9 84 69.0
Haze_06475 Corylus avellana HOM05D007781 ORTHO05D009769 3.8e-09 65.5 89 64.0
Manes.16G027000 Manihot esculenta HOM05D007781 ORTHO05D009769 4.9e-09 65.1 89 66.3
Medtr4g088850 Medicago truncatula HOM05D007781 ORTHO05D009769 6.4e-09 64.7 44 65.9
PSO541G0656 Papaver somniferum HOM05D007781 ORTHO05D009769 6.4e-09 64.7 87 64.4
PSO675G6168 Papaver somniferum HOM05D007781 ORTHO05D009769 6.4e-09 64.7 87 65.5
BcaC01g00689 Brassica carinata HOM05D001738 ORTHO05D001644 8.4e-09 64.3 81 71.6
BolC3t20599H Brassica oleracea HOM05D007781 ORTHO05D009769 8.4e-09 64.3 81 71.6
AT4G21610 Arabidopsis thaliana HOM05D007781 ORTHO05D009769 1.1e-08 63.9 81 71.6
Solyc02g078270.3 Solanum lycopersicum HOM05D007781 ORTHO05D009769 1.1e-08 63.9 83 71.1
AL7G32390 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.4e-08 63.5 81 70.4
Carub.0007s1977 Capsella rubella HOM05D007781 ORTHO05D009769 3.2e-08 62.4 83 71.1
SGA_v2.0_scaffold49G18292 Striga asiatica HOM05D007781 ORTHO05D009769 4.2e-08 62.0 89 64.0
Aqoxy1G02434 Aquilegia oxysepala HOM05D007781 ORTHO05D009769 9.3e-08 60.8 78 74.4
Migut.H01490 Erythranthe guttata HOM05D007781 ORTHO05D009769 2.1e-07 59.7 81 69.1
Ah.14g089440 Amaranthus hybridus HOM05D007781 ORTHO05D009769 3.5e-07 58.9 34 70.6
Peaxi162Scf00736g00429 Petunia axillaris HOM05D007781 ORTHO05D009769 7.9e-07 57.8 42 57.1
CSS0040858 Camellia sinensis var. sinensis HOM05D007781 ORTHO05D009769 3.0e-06 55.8 39 56.4
Os01g0612700 Oryza sativa ssp. japonica HOM05D021202 ORTHO05D009769 3.9e-06 55.5 88 67.0
TWI38G0207 Tripterygium wilfordii HOM05D007781 ORTHO05D009769 8.7e-06 54.3 38 57.9


User provided reference genes

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