Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0383301 Lupinus albus HOM05D005409 ORTHO05D006456 0.0e+00 1174.1 607 100.0
Lalb_Chr09g0327161 Lupinus albus HOM05D005409 ORTHO05D006456 1.9e-262 909.1 624 78.4
Glyma.07G187300 Glycine max HOM05D005409 ORTHO05D006456 8.5e-231 803.9 633 69.2
Glyma.08G061800 Glycine max HOM05D005409 ORTHO05D006456 1.1e-227 793.5 634 68.3
Lj4g0002185 Lotus japonicus HOM05D005409 ORTHO05D006456 4.3e-227 791.6 636 69.3
Phvul.002G218900 Phaseolus vulgaris HOM05D005409 ORTHO05D006456 1.4e-225 786.6 633 68.2
VMungo0251G1750 Vigna mungo HOM05D005409 ORTHO05D006456 9.4e-222 773.9 641 66.6
Ca_18454_v3 Cicer arietinum L. HOM05D005409 ORTHO05D006456 6.5e-215 751.1 635 66.6
TPR.G13934 Trifolium pratense HOM05D005409 ORTHO05D006456 1.1e-198 697.2 637 63.6
Psat0s935g0040 Pisum sativum HOM05D005409 ORTHO05D006456 8.0e-197 691.0 639 63.1
Medtr4g092050 Medicago truncatula HOM05D005409 ORTHO05D006456 4.4e-187 658.7 637 62.3
Cfa016400 Carpinus fangiana HOM05D005409 ORTHO05D006456 2.2e-170 603.2 635 55.9
Prupe.4G030000 Prunus persica HOM05D005409 ORTHO05D006456 7.3e-166 588.2 628 54.3
CiPaw.10G113200 Carya illinoinensis HOM05D005409 ORTHO05D006456 1.2e-163 580.9 632 53.3
MD05G1335400 Malus domestica HOM05D005409 ORTHO05D006456 3.5e-160 569.3 627 53.7
MD10G1310800 Malus domestica HOM05D005409 ORTHO05D006456 1.1e-153 547.7 632 51.7
Thecc.06G207400 Theobroma cacao HOM05D005409 ORTHO05D006456 3.2e-153 546.2 635 52.6
CiPaw.10G113100 Carya illinoinensis HOM05D005409 ORTHO05D006456 2.1e-152 543.5 634 51.6
Duzib192G0995 Durio zibethinus HOM05D005409 ORTHO05D006456 1.3e-149 534.3 637 51.3
Dinv18952 Davidia involucrata HOM05D005409 ORTHO05D006456 1.4e-148 530.8 658 50.3
CsaV3_1G011380 Cucumis sativus L. HOM05D005409 ORTHO05D006456 3.1e-148 529.6 634 50.6
FAN25G1204 Fragaria x ananassa HOM05D005409 ORTHO05D006456 9.0e-148 528.1 666 49.7
QL05p077347 Quercus lobata HOM05D005409 ORTHO05D006456 2.0e-147 526.9 685 48.8
Manes.17G030300 Manihot esculenta HOM05D005409 ORTHO05D006456 2.7e-144 516.5 633 49.9
ClCG03G005190 Citrullus lanatus HOM05D005409 ORTHO05D006456 2.3e-143 513.5 634 49.8
CANSAT35G0463 Cannabis sativa HOM05D005409 ORTHO05D006456 8.7e-143 511.5 638 50.9
Duzib235G0390 Durio zibethinus HOM05D005409 ORTHO05D006456 9.6e-142 508.1 648 48.9
Ciclev10014614m.g Citrus clementina HOM05D005409 ORTHO05D006456 2.8e-141 506.5 634 49.5
MELO3C002515.2 Cucumis melo HOM05D005409 ORTHO05D006456 1.4e-140 504.2 633 48.8
TWI63G1109 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 1.4e-140 504.2 648 48.8
COL.COLO4_33645 Corchorus olitorius HOM05D005409 ORTHO05D006456 2.4e-140 503.4 629 51.4
Gohir.D09G070300 Gossypium hirsutum HOM05D005409 ORTHO05D006456 4.2e-137 492.7 639 49.0
Gohir.D10G017400 Gossypium hirsutum HOM05D005409 ORTHO05D006456 2.7e-136 490.0 637 49.5
Gorai.011G019300 Gossypium raimondii HOM05D005409 ORTHO05D006456 2.7e-136 490.0 637 49.5
Gohir.A09G070200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 5.1e-135 485.7 638 49.2
Gorai.006G084700 Gossypium raimondii HOM05D005409 ORTHO05D006456 5.1e-135 485.7 646 48.5
Nn1g06923 Nelumbo nucifera HOM05D005409 ORTHO05D006456 8.7e-135 485.0 642 49.1
Gohir.A10G017200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 7.4e-134 481.9 636 49.1
TAR624G1144 Trochodendron aralioides HOM05D005409 ORTHO05D006456 1.3e-133 481.1 643 48.5
arahy.Tifrunner.gnm1.ann1.XK38U2 Arachis hypogaea HOM05D005409 ORTHO05D006456 1.2e-131 474.6 625 49.9
Actinidia11830 Actinidia chinensis HOM05D005409 ORTHO05D006456 4.5e-131 472.6 652 45.7
Sed0006411 Sechium edule HOM05D005409 ORTHO05D006456 3.8e-130 469.5 636 48.0
arahy.Tifrunner.gnm1.ann1.QZ9QK3 Arachis hypogaea HOM05D005409 ORTHO05D006456 1.6e-125 454.1 667 46.8
Potri.011G031900 Populus trichocarpa HOM05D005409 ORTHO05D006456 1.5e-123 447.6 634 44.8
Lj2A276T57 Lonicera japonica HOM05D005409 ORTHO05D006456 5.8e-123 445.7 649 45.6
Hma1.2p1_0809F.1_g221770 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 7.6e-123 445.3 653 45.2
Nitab4.5_0000503g0080 Nicotiana tabacum HOM05D005409 ORTHO05D006456 1.1e-121 441.4 646 46.0
TAR626G0140 Trochodendron aralioides HOM05D005409 ORTHO05D006456 9.3e-121 438.3 642 47.0
Solyc02g079880.3 Solanum lycopersicum HOM05D005409 ORTHO05D006456 6.1e-120 435.6 649 44.4
Nitab4.5_0006456g0010 Nicotiana tabacum HOM05D005409 ORTHO05D006456 1.0e-119 434.9 648 45.1
Sc17g0006920 Simmondsia chinensis HOM05D005409 ORTHO05D006456 1.3e-119 434.5 634 46.4
Peaxi162Scf00759g00211 Petunia axillaris HOM05D005409 ORTHO05D006456 3.0e-119 433.3 649 44.7
PGSC0003DMG400021722 Solanum tuberosum HOM05D005409 ORTHO05D006456 3.0e-119 433.3 649 44.7
Cc02_g11840 Coffea canephora HOM05D005409 ORTHO05D006456 8.7e-119 431.8 652 43.7
PGR042G2399 Punica granatum HOM05D005409 ORTHO05D006456 8.7e-119 431.8 618 47.7
Hund23539 Selenicereus undatus HOM05D005409 ORTHO05D006456 2.8e-117 426.8 640 44.1
Sopen02g024640 Solanum pennellii HOM05D005409 ORTHO05D006456 2.8e-117 426.8 652 44.8
TWI38G0167 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 3.2e-113 413.3 593 45.9
GSVIVG01006401001 Vitis vinifera HOM05D005409 ORTHO05D006456 2.7e-112 410.2 660 43.3
Rhsim02G0115600 Rhododendron simsii HOM05D005409 ORTHO05D006456 2.3e-111 407.1 697 41.3
ECA236G3644 Erigeron canadensis HOM05D005409 ORTHO05D006456 3.9e-111 406.4 636 44.3
Sabra11G0025100 Salix brachista HOM05D005409 ORTHO05D006456 1.1e-110 404.8 633 43.6
Oeu016146.1 Olea europaea HOM05D005409 ORTHO05D006456 4.3e-110 402.9 652 42.6
vmacro15844 Vaccinium macrocarpon HOM05D005409 ORTHO05D006456 9.7e-110 401.7 667 41.5
Haze_06671 Corylus avellana HOM05D005409 ORTHO05D006456 2.4e-108 397.1 440 53.6
Eucgr.E03596 Eucalyptus grandis HOM05D005409 ORTHO05D006456 4.5e-107 392.9 542 46.3
Ah.14g088510 Amaranthus hybridus HOM05D005409 ORTHO05D006456 8.5e-106 388.7 658 43.5
Aqoxy1G03830 Aquilegia oxysepala HOM05D005409 ORTHO05D006456 1.9e-105 387.5 669 42.0
EL10As6g23684 Beta vulgaris HOM05D005409 ORTHO05D006456 9.4e-105 385.2 665 44.1
AUR62012574 Chenopodium quinoa HOM05D005409 ORTHO05D006456 9.4e-105 385.2 650 44.0
Lj1A1221T57 Lonicera japonica HOM05D005409 ORTHO05D006456 2.1e-104 384.0 632 41.9
AUR62014626 Chenopodium quinoa HOM05D005409 ORTHO05D006456 4.4e-102 376.3 651 43.3
MSTRG.15953 Avicennia marina HOM05D005409 ORTHO05D006456 2.8e-101 373.6 654 40.7
HanXRQChr15g0482781 Helianthus annuus HOM05D005409 ORTHO05D006456 1.1e-100 371.7 642 43.5
FvH4_3g03030 Fragaria vesca HOM05D005409 ORTHO05D006456 2.4e-100 370.5 497 48.1
Hma1.2p1_0809F.1_g221760 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 5.0e-98 362.8 536 44.6
Sabra11G0019200 Salix brachista HOM05D005409 ORTHO05D006456 8.5e-98 362.1 631 41.0
PSO675G2591 Papaver somniferum HOM05D005409 ORTHO05D006456 4.2e-97 359.8 656 40.7
PSO541G2946 Papaver somniferum HOM05D005409 ORTHO05D006456 1.2e-96 358.2 656 40.5
HanXRQChr15g0482771 Helianthus annuus HOM05D005409 ORTHO05D006456 6.1e-96 355.9 642 42.2
Actinidia26760 Actinidia chinensis HOM05D005409 ORTHO05D006456 1.7e-93 347.8 539 41.9
DCAR_008109 Daucus carota HOM05D005409 ORTHO05D006456 2.8e-93 347.1 636 41.4
Actinidia24044 Actinidia chinensis HOM05D005409 ORTHO05D006456 2.6e-91 340.5 490 43.7
DCAR_004174 Daucus carota HOM05D005409 ORTHO05D006456 1.0e-90 338.6 613 42.3
THA.LOC104809524 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 1.0e-90 338.6 631 40.9
CSS0017238 Camellia sinensis var. sinensis HOM05D005409 ORTHO05D006456 1.1e-89 335.1 633 39.7
Oeu050809.4 Olea europaea HOM05D005409 ORTHO05D006456 1.1e-89 335.1 656 37.7
Lsat_1_v5_gn_7_18380 Lactuca sativa HOM05D005409 ORTHO05D006456 4.2e-89 333.2 625 41.8
RcHm_v2.0_Chr5g0004681 Rosa chinensis HOM05D005409 ORTHO05D006456 4.2e-89 333.2 473 45.9
MBI02_g26225_MAGBIO Magnolia biondii HOM05D005409 ORTHO05D006456 2.2e-85 320.9 656 39.6
Migut.M01258 Erythranthe guttata HOM05D005409 ORTHO05D006456 1.0e-82 312.0 638 39.3
Sp1g10100 Schrenkiella parvula HOM05D005409 ORTHO05D006456 1.0e-82 312.0 643 39.0
Cpa.g.sc81.2 Carica papaya HOM05D005409 ORTHO05D006456 8.5e-82 308.9 440 46.6
THA.LOC104818924 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 2.0e-78 297.7 591 39.1
AT1G11480 Arabidopsis thaliana HOM05D005409 ORTHO05D006456 7.5e-78 295.8 637 37.8
Aa31LG1G3270 Aethionema arabicum HOM05D005409 ORTHO05D006456 1.1e-76 292.0 653 37.7
AL1G22590 Arabidopsis lyrata HOM05D005409 ORTHO05D006456 4.1e-76 290.0 639 37.7
CARHR011750 Cardamine hirsuta HOM05D005409 ORTHO05D006456 1.2e-75 288.5 632 38.0
A06p08100 Brassica napus HOM05D005409 ORTHO05D006456 1.6e-75 288.1 644 37.3
BcaC05g25024 Brassica carinata HOM05D005409 ORTHO05D006456 2.0e-75 287.7 640 38.1
C05p09680 Brassica napus HOM05D005409 ORTHO05D006456 2.7e-75 287.3 640 38.3
Thhalv10007161m.g Eutrema salsugineum HOM05D005409 ORTHO05D006456 2.9e-74 283.9 634 36.8
BraA06t24009Z Brassica rapa HOM05D005409 ORTHO05D006456 5.5e-73 279.6 641 37.0
BolC5t29709H Brassica oleracea HOM05D005409 ORTHO05D006456 3.6e-72 276.9 627 37.6
CDE01G0308 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 8.0e-72 275.8 636 36.3
Carub.0001s1109 Capsella rubella HOM05D005409 ORTHO05D006456 3.0e-71 273.9 631 35.7
GSVIVG01030650001 Vitis vinifera HOM05D005409 ORTHO05D006456 4.4e-70 270.0 635 37.6
Potri.007G119200 Populus trichocarpa HOM05D005409 ORTHO05D006456 5.7e-70 269.6 661 37.1
SGA_v2.0_scaffold7G03896 Striga asiatica HOM05D005409 ORTHO05D006456 1.1e-68 265.4 694 34.4
Actinidia26959 Actinidia chinensis HOM05D005409 ORTHO05D006456 9.2e-68 262.3 476 40.1
CDE12G0800 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 5.0e-66 256.5 509 39.3
Sabra17G0028000 Salix brachista HOM05D005409 ORTHO05D006456 1.1e-65 255.4 707 34.8
SalBow8G4343 Salvia bowleyana HOM05D005409 ORTHO05D006456 2.8e-64 250.8 453 41.5
HPP92_000870 Vanilla planifolia HOM05D005409 ORTHO05D006456 1.0e-63 248.8 655 36.0
Potri.017G041300 Populus trichocarpa HOM05D005409 ORTHO05D006456 4.4e-62 243.4 645 36.6
Atru.chr10.2048 Acer truncatum HOM05D005409 ORTHO05D006456 9.2e-60 235.7 357 43.4
Sabra07G0096100 Salix brachista HOM05D005409 ORTHO05D006456 8.6e-58 229.2 768 31.8
Oeu050499.1 Olea europaea HOM05D005409 ORTHO05D006456 1.8e-55 221.5 361 42.7
BcaNung07116 Brassica carinata HOM05D005409 ORTHO05D006456 1.7e-53 214.9 396 40.2
RcHm_v2.0_Chr5g0004671 Rosa chinensis HOM05D005409 ORTHO05D006456 1.1e-44 185.7 134 68.7
Ah.09g237100 Amaranthus hybridus HOM05D000067 ORTHO05D006456 3.2e-44 184.1 602 30.4
GSVIVG01006635001 Vitis vinifera HOM05D005409 ORTHO05D006456 4.1e-44 183.7 162 62.3
ATR0804G077 Amborella trichopoda HOM05D005409 ORTHO05D006456 7.8e-43 179.5 725 32.4
Cpa.g.sc81.1 Carica papaya HOM05D005409 ORTHO05D006456 8.6e-42 176.0 194 55.7
Atru.chr6.3116 Acer truncatum HOM05D005409 ORTHO05D006456 3.1e-39 167.5 468 35.0
Zm00001eb323520 Zea mays HOM05D005409 ORTHO05D006456 1.7e-37 161.8 643 31.3
Os07g0546100 Oryza sativa ssp. japonica HOM05D005409 ORTHO05D006456 8.4e-37 159.5 643 30.6
Atru.chr10.2047 Acer truncatum HOM05D005409 ORTHO05D006456 3.5e-35 154.1 255 42.4
SMO118G0050 Selaginella moellendorffii HOM05D005409 ORTHO05D006456 2.4e-28 131.3 748 25.5
Haze_06667 Corylus avellana HOM05D005409 ORTHO05D006456 9.9e-22 109.4 182 40.7
AagrBONN_evm.TU.Sc2ySwM_228.455 Anthoceros agrestis HOM05D005409 ORTHO05D006456 1.2e-19 102.4 133 46.6
Mapoly0113s0049 Marchantia polymorpha HOM05D005409 ORTHO05D006456 1.6e-19 102.1 107 55.1
Pp3c20_3440 Physcomitrium patens HOM05D005409 ORTHO05D006456 1.3e-18 99.0 108 52.8
Atru.chr6.3115 Acer truncatum HOM05D005409 ORTHO05D006456 3.1e-15 87.8 191 38.2
Zm00001eb106500 Zea mays HOM05D005409 ORTHO05D006456 9.0e-15 86.3 389 30.6
QL05p012359 Quercus lobata HOM05D005409 ORTHO05D006456 2.6e-14 84.7 116 44.8
Actinidia26960 Actinidia chinensis HOM05D005409 ORTHO05D006456 5.8e-14 83.6 85 54.1
SEGI_29006 Sequoiadendron giganteum HOM05D005409 ORTHO05D006456 1.6e-11 75.5 248 30.6
CBR_g36658 Chara braunii HOM05D005409 ORTHO05D006456 1.8e-10 72.0 120 40.0


User provided reference genes

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