Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0382621 Lupinus albus HOM05D006923 ORTHO05D008697 2.4e-165 585.5 304 100.0
Phvul.002G078400 Phaseolus vulgaris HOM05D006923 ORTHO05D008697 6.1e-121 438.0 308 76.9
TPR.G26715 Trifolium pratense HOM05D006923 ORTHO05D008697 1.0e-120 437.2 303 76.6
Lj2g0018338 Lotus japonicus HOM05D006923 ORTHO05D008697 3.0e-120 435.6 306 77.8
Ca_05074_v3 Cicer arietinum L. HOM05D006923 ORTHO05D008697 4.4e-119 431.8 312 74.4
Glyma.02G026400 Glycine max HOM05D006923 ORTHO05D008697 7.5e-119 431.0 305 75.1
Psat2g114680 Pisum sativum HOM05D006923 ORTHO05D008697 5.3e-117 424.9 305 74.8
arahy.Tifrunner.gnm1.ann1.EW3DBQ Arachis hypogaea HOM05D006923 ORTHO05D008697 7.0e-117 424.5 305 74.8
QL03p067501 Quercus lobata HOM05D006923 ORTHO05D008697 9.1e-109 397.5 252 77.4
arahy.Tifrunner.gnm1.ann1.NUE0XS Arachis hypogaea HOM05D006923 ORTHO05D008697 7.7e-108 394.4 286 73.4
CiPaw.06G077400 Carya illinoinensis HOM05D006923 ORTHO05D008697 8.6e-107 391.0 272 72.4
Cfa009080 Carpinus fangiana HOM05D006923 ORTHO05D008697 1.5e-106 390.2 264 74.2
GSVIVG01020133001 Vitis vinifera HOM05D006923 ORTHO05D008697 1.8e-104 383.3 259 73.7
Manes.05G093700 Manihot esculenta HOM05D006923 ORTHO05D008697 4.0e-104 382.1 259 74.9
ClCG05G024880 Citrullus lanatus HOM05D006923 ORTHO05D008697 2.6e-103 379.4 250 73.6
TAR629G1985 Trochodendron aralioides HOM05D006923 ORTHO05D008697 7.5e-103 377.9 252 73.0
MSTRG.649 Avicennia marina HOM05D006923 ORTHO05D008697 3.7e-102 375.6 269 69.9
Dinv31139 Davidia involucrata HOM05D006923 ORTHO05D008697 3.7e-102 375.6 252 75.0
Gohir.A05G320000 Gossypium hirsutum HOM05D006923 ORTHO05D008697 4.9e-102 375.2 254 72.8
MD13G1084200 Malus domestica HOM05D006923 ORTHO05D008697 1.1e-101 374.0 272 70.2
Gorai.009G345900 Gossypium raimondii HOM05D006923 ORTHO05D008697 1.4e-101 373.6 254 72.4
Sed0028145 Sechium edule HOM05D006923 ORTHO05D008697 1.4e-101 373.6 270 70.4
Atru.chr11.1922 Acer truncatum HOM05D006923 ORTHO05D008697 1.8e-101 373.2 264 70.1
Nn4g22963 Nelumbo nucifera HOM05D006923 ORTHO05D008697 2.4e-101 372.9 272 69.1
Sopen04g001110 Solanum pennellii HOM05D006923 ORTHO05D008697 5.4e-101 371.7 258 72.5
Actinidia24653 Actinidia chinensis HOM05D006923 ORTHO05D008697 7.0e-101 371.3 252 74.2
Solyc04g005090.4 Solanum lycopersicum HOM05D006923 ORTHO05D008697 1.2e-100 370.5 267 70.4
Peaxi162Scf00266g00035 Petunia axillaris HOM05D006923 ORTHO05D008697 3.5e-100 369.0 244 73.4
CSS0003222 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 5.9e-100 368.2 275 69.8
Gohir.D05G322300 Gossypium hirsutum HOM05D006923 ORTHO05D008697 5.9e-100 368.2 254 71.7
PGSC0003DMG400001928 Solanum tuberosum HOM05D006923 ORTHO05D008697 5.9e-100 368.2 265 69.1
Aqoxy3G03167 Aquilegia oxysepala HOM05D006923 ORTHO05D008697 2.9e-99 365.9 266 68.0
COL.COLO4_36266 Corchorus olitorius HOM05D006923 ORTHO05D008697 3.9e-99 365.5 254 71.7
Cpa.g.sc5.315 Carica papaya HOM05D006923 ORTHO05D008697 5.0e-99 365.2 252 72.2
Migut.L01372 Erythranthe guttata HOM05D006923 ORTHO05D008697 8.6e-99 364.4 276 69.2
PSO591G0274 Papaver somniferum HOM05D006923 ORTHO05D008697 1.1e-98 364.0 268 69.4
Ciclev10032274m.g Citrus clementina HOM05D006923 ORTHO05D008697 3.3e-98 362.5 259 69.9
SGA_v2.0_scaffold166G38306 Striga asiatica HOM05D006923 ORTHO05D008697 9.5e-98 360.9 241 74.7
Cc11_g13930 Coffea canephora HOM05D006923 ORTHO05D008697 1.2e-97 360.5 262 70.6
PGR102G0681 Punica granatum HOM05D006923 ORTHO05D008697 1.6e-97 360.1 271 66.4
EL10Ac6g13089 Beta vulgaris HOM05D006923 ORTHO05D008697 3.6e-97 359.0 289 65.1
Rhsim12G0127000 Rhododendron simsii HOM05D006923 ORTHO05D008697 6.1e-97 358.2 252 69.4
CAN.G25.5 Capsicum annuum HOM05D006923 ORTHO05D008697 8.0e-97 357.8 268 67.9
Lj6C798T8 Lonicera japonica HOM05D006923 ORTHO05D008697 8.0e-97 357.8 275 67.6
SalBow2G1484 Salvia bowleyana HOM05D006923 ORTHO05D008697 4.0e-96 355.5 264 68.2
SalBow2G2758 Salvia bowleyana HOM05D006923 ORTHO05D008697 4.0e-96 355.5 264 68.2
Thecc.02G238100 Theobroma cacao HOM05D006923 ORTHO05D008697 5.2e-96 355.1 254 70.5
CSS0013336 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 6.8e-96 354.8 241 74.3
Potri.008G191900 Populus trichocarpa HOM05D006923 ORTHO05D008697 6.8e-96 354.8 268 69.4
RcHm_v2.0_Chr4g0444951 Rosa chinensis HOM05D006923 ORTHO05D008697 8.9e-96 354.4 300 64.0
AUR62039449 Chenopodium quinoa HOM05D006923 ORTHO05D008697 2.0e-95 353.2 304 63.5
FAN07G0582 Fragaria x ananassa HOM05D006923 ORTHO05D008697 7.5e-95 351.3 256 71.1
FAN22G1061 Fragaria x ananassa HOM05D006923 ORTHO05D008697 7.5e-95 351.3 256 71.1
HanXRQChr09g0267151 Helianthus annuus HOM05D006923 ORTHO05D008697 7.5e-95 351.3 244 71.3
CsaV3_5G032010 Cucumis sativus L. HOM05D006923 ORTHO05D008697 1.3e-94 350.5 244 72.5
FvH4_4g35320 Fragaria vesca HOM05D006923 ORTHO05D008697 8.3e-94 347.8 270 69.3
FAN12G2795 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.9e-93 346.7 264 70.5
Aa31LG2G10350 Aethionema arabicum HOM05D006923 ORTHO05D008697 1.6e-92 343.6 264 67.0
Sp2g04730 Schrenkiella parvula HOM05D006923 ORTHO05D008697 1.6e-92 343.6 257 67.7
THA.LOC104819679 Tarenaya hassleriana HOM05D006923 ORTHO05D008697 2.7e-92 342.8 268 66.0
Carub.0002s0542 Capsella rubella HOM05D006923 ORTHO05D008697 1.0e-91 340.9 254 67.7
unitig_26.g10329 Utricularia gibba HOM05D006923 ORTHO05D008697 1.0e-91 340.9 277 65.0
VMungo1215G1603 Vigna mungo HOM05D006923 ORTHO05D008697 1.0e-91 340.9 255 73.3
AT1G59840 Arabidopsis thaliana HOM05D006923 ORTHO05D008697 2.3e-91 339.7 260 66.2
Thhalv10023990m.g Eutrema salsugineum HOM05D006923 ORTHO05D008697 2.3e-91 339.7 260 68.1
Prupe.1G262600 Prunus persica HOM05D006923 ORTHO05D008697 5.0e-91 338.6 245 71.0
AL2G16930 Arabidopsis lyrata HOM05D006923 ORTHO05D008697 8.6e-91 337.8 254 67.3
Medtr5g037050 Medicago truncatula HOM05D006923 ORTHO05D008697 1.1e-90 337.4 266 70.3
CANSAT01G2170 Cannabis sativa HOM05D006923 ORTHO05D008697 2.5e-90 336.3 303 63.4
Hund25304 Selenicereus undatus HOM05D006923 ORTHO05D008697 3.3e-90 335.9 262 64.9
CDE04G0355 Ceratophyllum demersum HOM05D006923 ORTHO05D008697 1.6e-89 333.6 264 62.9
Nitab4.5_0005168g0020 Nicotiana tabacum HOM05D006923 ORTHO05D008697 2.1e-89 333.2 257 67.7
BcaB04g20234 Brassica carinata HOM05D006923 ORTHO05D008697 6.2e-89 331.6 242 68.6
vmacro16302 Vaccinium macrocarpon HOM05D006923 ORTHO05D008697 6.2e-89 331.6 252 67.5
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 1.1e-88 330.9 279 62.0
Aa31LG1G14870 Aethionema arabicum HOM05D006923 ORTHO05D008697 2.3e-88 329.7 279 62.4
BolC1t03615H Brassica oleracea HOM05D006923 ORTHO05D008697 3.1e-88 329.3 259 66.0
C01p36540 Brassica napus HOM05D006923 ORTHO05D008697 1.5e-87 327.0 282 61.7
BcaC09g49455 Brassica carinata HOM05D006923 ORTHO05D008697 3.7e-86 322.4 269 62.5
Sabra08G0145400 Salix brachista HOM05D006923 ORTHO05D008697 7.1e-85 318.2 227 71.4
Haze_12112 Corylus avellana HOM05D006923 ORTHO05D008697 1.7e-83 313.5 199 77.9
Sc11g0001490 Simmondsia chinensis HOM05D006923 ORTHO05D008697 2.3e-83 313.2 223 70.0
A01p28870 Brassica napus HOM05D006923 ORTHO05D008697 6.6e-83 311.6 231 69.3
BcaC06g31796 Brassica carinata HOM05D006923 ORTHO05D008697 2.5e-82 309.7 243 65.0
BcaNung06340 Brassica carinata HOM05D006923 ORTHO05D008697 2.5e-82 309.7 231 68.0
BraA01t03022Z Brassica rapa HOM05D006923 ORTHO05D008697 3.3e-82 309.3 268 63.1
HPP92_026426 Vanilla planifolia HOM05D006923 ORTHO05D008697 2.1e-81 306.6 235 65.5
TWI18G0575 Tripterygium wilfordii HOM05D006923 ORTHO05D008697 4.7e-81 305.4 305 57.4
Os04g0650500 Oryza sativa ssp. japonica HOM05D006923 ORTHO05D008697 1.4e-80 303.9 240 65.0
Lsat_1_v5_gn_7_91800 Lactuca sativa HOM05D006923 ORTHO05D008697 2.0e-79 300.1 231 66.7
MELO3C012038.2 Cucumis melo HOM05D006923 ORTHO05D008697 2.2e-78 296.6 224 68.8
Zm00001eb068300 Zea mays HOM05D006923 ORTHO05D008697 2.2e-78 296.6 235 66.0
ATR0624G013 Amborella trichopoda HOM05D006923 ORTHO05D008697 3.0e-75 286.2 263 57.8
AUR62026532 Chenopodium quinoa HOM05D006923 ORTHO05D008697 4.0e-72 275.8 250 58.8
CARHR053250 Cardamine hirsuta HOM05D006923 ORTHO05D008697 6.0e-68 261.9 187 70.1
Duzib268G0289 Durio zibethinus HOM05D006923 ORTHO05D008697 1.8e-64 250.4 254 55.5
Pp3c3_23340 Physcomitrium patens HOM05D006923 ORTHO05D008697 4.6e-60 235.7 232 53.4
Mapoly0001s0231 Marchantia polymorpha HOM05D006923 ORTHO05D008697 3.6e-57 226.1 226 52.7
FAN17G2763 Fragaria x ananassa HOM05D006923 ORTHO05D008697 8.4e-54 214.9 270 48.5
CBR_g3926 Chara braunii HOM05D006923 ORTHO05D008697 1.3e-51 207.6 222 46.8
MBI17_g35870_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 9.0e-48 194.9 143 66.4
Cre08.g382300 Chlamydomonas reinhardtii HOM05D006923 ORTHO05D008697 1.5e-39 167.5 233 39.1
MCO16G195 Micromonas commoda HOM05D006923 ORTHO05D008697 3.4e-39 166.4 246 38.6
Nitab4.5_0001908g0040 Nicotiana tabacum HOM05D006923 ORTHO05D008697 7.9e-36 155.2 218 43.1
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 8.2e-33 145.2 251 35.1
PSO832G3782 Papaver somniferum HOM05D006923 ORTHO05D008697 1.8e-32 144.1 91 75.8
Sed0022420 Sechium edule HOM05D006923 ORTHO05D008697 9.4e-29 131.7 134 53.7
SEGI_22816 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 1.2e-23 114.8 85 64.7
AagrBONN_evm.TU.Sc2ySwM_117.4092 Anthoceros agrestis HOM05D006923 ORTHO05D008697 2.1e-20 104.0 108 50.9
VMungo1215G3051 Vigna mungo HOM05D006923 ORTHO05D008697 1.5e-18 97.8 55 83.6
Hma1.2p1_0289F.1_g114510 Hydrangea macrophylla HOM05D006923 ORTHO05D008697 1.7e-14 84.3 62 66.1
CiPaw.05G144000 Carya illinoinensis HOM05D006923 ORTHO05D008697 8.5e-14 82.0 104 49.0
MBI17_g35869_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 8.8e-11 72.0 88 44.3
SEGI_22360 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 2.6e-10 70.5 52 59.6
A07p27760 Brassica napus HOM05D006923 ORTHO05D024228 3.1e-08 63.5 70 51.4
BraA07t30415Z Brassica rapa HOM05D006923 ORTHO05D024228 3.1e-08 63.5 70 51.4
BraA08t33759Z Brassica rapa HOM05D020796 ORTHO05D024228 4.1e-08 63.2 70 51.4


User provided reference genes

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