Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0382221 Lupinus albus HOM05D007558 ORTHO05D009245 9.5e-113 410.2 212 100.0
Lalb_Chr05g0216831 Lupinus albus HOM05D007558 ORTHO05D009245 1.4e-47 193.7 135 81.5
Glyma.01G030000 Glycine max HOM05D007558 ORTHO05D009245 7.7e-30 134.8 146 61.6
VMungo1215G0509 Vigna mungo HOM05D007558 ORTHO05D009245 1.3e-29 134.0 148 59.5
Phvul.002G070800 Phaseolus vulgaris HOM05D007558 ORTHO05D009245 1.1e-28 131.0 149 59.7
Lj2g0015975 Lotus japonicus HOM05D007558 ORTHO05D009245 1.4e-26 124.0 134 60.4
Glyma.02G035400 Glycine max HOM05D007558 ORTHO05D009245 1.5e-25 120.6 146 57.5
Medtr5g034200 Medicago truncatula HOM05D007558 ORTHO05D009245 7.0e-23 111.7 161 49.7
QL03p060106 Quercus lobata HOM05D007558 ORTHO05D009245 6.8e-18 95.1 101 55.4
TPR.G21100 Trifolium pratense HOM05D007558 ORTHO05D009245 3.4e-17 92.8 91 69.2
Dinv15286 Davidia involucrata HOM05D000812 ORTHO05D000672 1.3e-16 90.9 97 51.5
Ciclev10032958m.g Citrus clementina HOM05D007558 ORTHO05D009245 4.9e-16 89.0 129 44.2
Duzib248G0521 Durio zibethinus HOM05D007558 ORTHO05D009245 1.4e-15 87.4 124 46.0
Potri.010G041600 Populus trichocarpa HOM05D007558 ORTHO05D009245 1.4e-15 87.4 120 43.3
CiPaw.06G071200 Carya illinoinensis HOM05D007558 ORTHO05D009245 5.4e-15 85.5 120 44.2
Cfa009155 Carpinus fangiana HOM05D007558 ORTHO05D009245 9.2e-15 84.7 102 48.0
Lj4g0018280 Lotus japonicus HOM05D007558 ORTHO05D009245 1.2e-14 84.3 145 43.4
Hma1.2p1_0536F.1_g173970 Hydrangea macrophylla HOM05D007558 ORTHO05D009245 3.5e-14 82.8 97 49.5
Prupe.1G252500 Prunus persica HOM05D007558 ORTHO05D009245 5.9e-14 82.0 141 46.1
Duzib268G0018 Durio zibethinus HOM05D007558 ORTHO05D009245 7.7e-14 81.6 98 52.0
Lalb_Chr09g0334981 Lupinus albus HOM05D007558 ORTHO05D009245 7.7e-14 81.6 145 42.1
Manes.12G027900 Manihot esculenta HOM05D007558 ORTHO05D009245 7.7e-14 81.6 131 39.7
Thecc.02G251400 Theobroma cacao HOM05D007558 ORTHO05D009245 7.7e-14 81.6 97 50.5
TPR.G11688 Trifolium pratense HOM05D007558 ORTHO05D009245 1.0e-13 81.3 146 37.7
MD13G1093000 Malus domestica HOM05D007558 ORTHO05D009245 1.3e-13 80.9 143 41.3
FvH4_4g34300 Fragaria vesca HOM05D007558 ORTHO05D009245 2.3e-13 80.1 154 40.3
RcHm_v2.0_Chr4g0443731 Rosa chinensis HOM05D007558 ORTHO05D009245 8.6e-13 78.2 154 40.3
FAN07G0793 Fragaria x ananassa HOM05D007558 ORTHO05D009245 1.1e-12 77.8 162 38.3
PGR102G1011 Punica granatum HOM05D007558 ORTHO05D009245 2.5e-12 76.6 107 46.7
CiPaw.05G151900 Carya illinoinensis HOM05D007558 ORTHO05D009245 3.3e-12 76.3 69 56.5
Gohir.A12G143200 Gossypium hirsutum HOM05D007558 ORTHO05D009245 3.3e-12 76.3 96 49.0
Gohir.D12G147900 Gossypium hirsutum HOM05D007558 ORTHO05D009245 3.3e-12 76.3 96 49.0
Gorai.008G159200 Gossypium raimondii HOM05D007558 ORTHO05D009245 3.3e-12 76.3 96 49.0
Oeu056732.1 Olea europaea HOM05D007558 ORTHO05D009245 4.3e-12 75.9 119 42.9
CSS0045389 Camellia sinensis var. sinensis HOM05D007558 ORTHO05D009245 5.6e-12 75.5 109 43.1
FAN12G2944 Fragaria x ananassa HOM05D007558 ORTHO05D009245 5.6e-12 75.5 154 39.0
Gohir.D04G178700 Gossypium hirsutum HOM05D007558 ORTHO05D009245 5.6e-12 75.5 135 40.7
TPR.G11726 Trifolium pratense HOM05D007558 ORTHO05D009245 5.6e-12 75.5 146 37.0
CSS0017958 Camellia sinensis var. sinensis HOM05D007558 ORTHO05D009245 9.5e-12 74.7 111 44.1
FAN22G1900 Fragaria x ananassa HOM05D007558 ORTHO05D009245 9.5e-12 74.7 162 37.7
COL.COLO4_24179 Corchorus olitorius HOM05D007558 ORTHO05D009245 1.6e-11 73.9 104 49.0
FAN17G0543 Fragaria x ananassa HOM05D007558 ORTHO05D009245 1.6e-11 73.9 164 37.2
Actinidia08162 Actinidia chinensis HOM05D007558 ORTHO05D009245 2.1e-11 73.6 111 45.9
Glyma.08G286300 Glycine max HOM05D007558 ORTHO05D009245 2.1e-11 73.6 119 45.4
Gohir.A03G139000 Gossypium hirsutum HOM05D007558 ORTHO05D009245 2.1e-11 73.6 117 45.3
Gohir.A04G135600 Gossypium hirsutum HOM05D007558 ORTHO05D009245 3.6e-11 72.8 139 39.6
Gohir.D02G161900 Gossypium hirsutum HOM05D007558 ORTHO05D009245 3.6e-11 72.8 117 44.4
Gorai.012G171800 Gossypium raimondii HOM05D007558 ORTHO05D009245 3.6e-11 72.8 135 40.0
Eucgr.B03316 Eucalyptus grandis HOM05D007558 ORTHO05D009245 4.7e-11 72.4 121 45.5
Peaxi162Scf00710g00042 Petunia axillaris HOM05D020724 ORTHO05D009245 4.7e-11 72.4 131 39.7
TWI18G1040 Tripterygium wilfordii HOM05D007558 ORTHO05D009245 1.0e-10 71.2 119 40.3
Nitab4.5_0004636g0010 Nicotiana tabacum HOM05D007558 ORTHO05D009245 1.8e-10 70.5 129 34.1
MSTRG.7902 Avicennia marina HOM05D007558 ORTHO05D009245 4.0e-10 69.3 127 40.9
ClCG05G025370 Citrullus lanatus HOM05D007558 ORTHO05D009245 5.2e-10 68.9 103 47.6
DCAR_007085 Daucus carota HOM05D007558 ORTHO05D009245 5.2e-10 68.9 109 39.4
Oeu054057.1 Olea europaea HOM05D007558 ORTHO05D009245 5.2e-10 68.9 119 41.2
Psat2g104560 Pisum sativum HOM05D007558 ORTHO05D009245 5.2e-10 68.9 51 68.6
Aqoxy3G02932 Aquilegia oxysepala HOM05D007558 ORTHO05D009245 8.9e-10 68.2 96 43.8
Nn3g16851 Nelumbo nucifera HOM05D007558 ORTHO05D009245 8.9e-10 68.2 98 41.8
SGA_v2.0_scaffold8G04208 Striga asiatica HOM05D007558 ORTHO05D009245 8.9e-10 68.2 127 41.7
GSVIVG01013748001 Vitis vinifera HOM05D007558 ORTHO05D009245 8.9e-10 68.2 80 52.5
Atru.chr11.2043 Acer truncatum HOM05D007558 ORTHO05D009245 2.0e-09 67.0 124 42.7
MD16G1094000 Malus domestica HOM05D007558 ORTHO05D009245 2.6e-09 66.6 147 36.7
Lsat_1_v5_gn_8_155581 Lactuca sativa HOM05D007558 ORTHO05D009245 3.4e-09 66.2 124 41.1
Phvul.003G060900 Phaseolus vulgaris HOM05D007558 ORTHO05D009245 3.4e-09 66.2 91 47.3
CAN.G126.6 Capsicum annuum HOM05D007558 ORTHO05D009245 5.7e-09 65.5 135 35.6
ECA233G1669 Erigeron canadensis HOM05D007558 ORTHO05D009245 5.7e-09 65.5 104 39.4
Sc11g0001140 Simmondsia chinensis HOM05D007558 ORTHO05D009245 9.8e-09 64.7 54 59.3
Nn4g22760 Nelumbo nucifera HOM05D007558 ORTHO05D009245 2.2e-08 63.5 98 41.8
MELO3C011993.2 Cucumis melo HOM05D007558 ORTHO05D009245 3.7e-08 62.8 102 43.1
Cpa.g.sc69.52 Carica papaya HOM05D001601 ORTHO05D002628 4.9e-08 62.4 108 40.7
SalBow2G1747 Salvia bowleyana HOM05D007558 ORTHO05D009245 4.9e-08 62.4 81 49.4
VMungo0251G2708 Vigna mungo HOM05D007558 ORTHO05D009245 6.4e-08 62.0 144 38.2
DCAR_026537 Daucus carota HOM05D007558 ORTHO05D009245 8.3e-08 61.6 106 40.6
Psat4g124320 Pisum sativum HOM05D007558 ORTHO05D009245 8.3e-08 61.6 62 56.5
TAR374G1667 Trochodendron aralioides HOM05D007558 ORTHO05D009245 8.3e-08 61.6 56 57.1
Nitab4.5_0000034g0280 Nicotiana tabacum HOM05D007558 ORTHO05D009245 1.4e-07 60.8 129 33.3
Sed0009378 Sechium edule HOM05D007558 ORTHO05D009245 2.4e-07 60.1 118 43.2
Manes.13G029400 Manihot esculenta HOM05D007558 ORTHO05D009245 4.1e-07 59.3 142 33.8
MBI16_g27096_MAGBIO Magnolia biondii HOM05D007558 ORTHO05D009245 9.2e-07 58.2 95 36.8
Lsat_1_v5_gn_4_5541 Lactuca sativa HOM05D007558 ORTHO05D009245 2.7e-06 56.6 94 37.2
ECA234G1002 Erigeron canadensis HOM05D007558 ORTHO05D009245 7.8e-06 55.1 113 33.6


User provided reference genes

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