Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0381411 Lupinus albus HOM05D003733 ORTHO05D004035 9.5e-217 756.9 485 100.0
Lalb_Chr09g0325721 Lupinus albus HOM05D003733 ORTHO05D004035 1.0e-130 471.1 460 72.6
Medtr5g030610 Medicago truncatula HOM05D003733 ORTHO05D004035 1.5e-116 424.1 486 58.0
Medtr5g430710 Medicago truncatula HOM05D003733 ORTHO05D008786 1.5e-116 424.1 486 58.0
TPR.G1045 Trifolium pratense HOM05D003733 ORTHO05D008786 1.5e-116 424.1 411 60.6
Lj2g0016248 Lotus japonicus HOM05D003733 ORTHO05D004035 4.0e-114 416.0 475 56.6
Psat2g135720 Pisum sativum HOM05D003733 ORTHO05D004035 1.8e-111 407.1 405 58.3
Glyma.08G272800 Glycine max HOM05D003733 ORTHO05D004035 1.2e-110 404.4 459 56.2
Ca_06073_v3 Cicer arietinum L. HOM05D003733 ORTHO05D004035 8.6e-109 398.3 432 60.9
Phvul.002G139100 Phaseolus vulgaris HOM05D003733 ORTHO05D004035 1.0e-106 391.3 528 52.8
VMungo1215G3108 Vigna mungo HOM05D003733 ORTHO05D004035 4.9e-104 382.5 439 55.1
Glyma.01G097200 Glycine max HOM05D003733 ORTHO05D004035 3.5e-102 376.3 407 58.2
arahy.Tifrunner.gnm1.ann1.DCX0GA Arachis hypogaea HOM05D003733 ORTHO05D004035 9.5e-100 368.2 414 56.3
arahy.Tifrunner.gnm1.ann1.KS8TVJ Arachis hypogaea HOM05D003733 ORTHO05D004035 9.5e-100 368.2 414 56.3
Lj4g0014652 Lotus japonicus HOM05D003733 ORTHO05D004035 9.5e-100 368.2 400 57.2
Phvul.003G285300 Phaseolus vulgaris HOM05D003733 ORTHO05D004035 1.2e-97 361.3 522 48.7
QL06p037705 Quercus lobata HOM05D003733 ORTHO05D004035 4.6e-94 349.4 465 54.2
Lalb_Chr05g0216131 Lupinus albus HOM05D001142 ORTHO05D003453 1.1e-92 344.7 296 72.0
VMungo0251G1204 Vigna mungo HOM05D003733 ORTHO05D004035 1.5e-89 334.3 484 48.6
GSVIVG01003708001 Vitis vinifera HOM05D003733 ORTHO05D004035 2.0e-89 334.0 446 50.7
Cfa006814 Carpinus fangiana HOM05D003733 ORTHO05D004035 4.4e-89 332.8 411 51.8
Lj3g0005458 Lotus japonicus HOM05D003733 ORTHO05D004035 9.8e-89 331.6 400 54.0
arahy.Tifrunner.gnm1.ann1.24SHUP Arachis hypogaea HOM05D003733 ORTHO05D004035 2.4e-87 327.0 404 55.2
arahy.Tifrunner.gnm1.ann1.EGH0HL Arachis hypogaea HOM05D003733 ORTHO05D004035 9.2e-87 325.1 404 55.2
VMungo1309G1560 Vigna mungo HOM05D003733 ORTHO05D004035 6.6e-85 318.9 479 47.0
Prupe.6G211200 Prunus persica HOM05D003733 ORTHO05D004035 1.5e-84 317.8 460 44.8
TAR381G0096 Trochodendron aralioides HOM05D003733 ORTHO05D004035 2.8e-83 313.5 445 52.1
RcHm_v2.0_Chr2g0109681 Rosa chinensis HOM05D003733 ORTHO05D004035 9.9e-81 305.1 443 45.8
Dinv26992 Davidia involucrata HOM05D003733 ORTHO05D004035 2.4e-79 300.4 413 47.5
TAR376G0930 Trochodendron aralioides HOM05D003733 ORTHO05D004035 1.2e-78 298.1 413 48.4
TAR625G0952 Trochodendron aralioides HOM05D003733 ORTHO05D004035 1.6e-75 287.7 400 50.2
Actinidia36390 Actinidia chinensis HOM05D003733 ORTHO05D004035 4.7e-75 286.2 418 45.5
CiPaw.12G004300 Carya illinoinensis HOM05D003733 ORTHO05D004035 1.4e-74 284.6 470 45.5
Nn1g05776 Nelumbo nucifera HOM05D003733 ORTHO05D004035 4.0e-74 283.1 416 48.8
CSS0008611 Camellia sinensis var. sinensis HOM05D003733 ORTHO05D004035 2.9e-72 276.9 463 45.4
Atru.chr3.1125_Atru.chr3.1126 Acer truncatum HOM05D003733 ORTHO05D004035 4.9e-72 276.2 415 46.5
Atru.chr3.1134_Atru.chr3.1135 Acer truncatum HOM05D003733 ORTHO05D004035 4.9e-72 276.2 415 46.5
Haze_03945 Corylus avellana HOM05D003733 ORTHO05D004035 2.1e-70 270.8 411 44.8
TWI53G0148 Tripterygium wilfordii HOM05D003733 ORTHO05D004035 3.0e-69 266.9 414 45.7
Potri.007G009700 Populus trichocarpa HOM05D003733 ORTHO05D004035 3.9e-69 266.5 450 48.2
Lj4A174T33 Lonicera japonica HOM05D003733 ORTHO05D004035 6.6e-69 265.8 408 49.0
Actinidia11935 Actinidia chinensis HOM05D003733 ORTHO05D004035 4.0e-66 256.5 418 42.6
vmacro07413 Vaccinium macrocarpon HOM05D003733 ORTHO05D004035 6.9e-66 255.8 419 43.7
FvH4_1g18820 Fragaria vesca HOM05D003733 ORTHO05D004035 2.9e-64 250.4 521 37.0
FAN19G3013 Fragaria x ananassa HOM05D003733 ORTHO05D004035 6.4e-64 249.2 522 36.6
FAN23G1272 Fragaria x ananassa HOM05D003733 ORTHO05D004035 1.1e-63 248.4 492 38.4
MD16G1281700 Malus domestica HOM05D003733 ORTHO05D004035 2.7e-62 243.8 466 39.5
Sabra07G0007400 Salix brachista HOM05D003733 ORTHO05D008786 6.0e-62 242.7 414 43.5
Rhsim10G0187300 Rhododendron simsii HOM05D006560 ORTHO05D008164 2.5e-60 237.3 414 42.3
Thecc.01G082000 Theobroma cacao HOM05D003733 ORTHO05D004035 4.3e-60 236.5 490 46.1
MD01G1046400 Malus domestica HOM05D003733 ORTHO05D004035 1.1e-58 231.9 477 37.9
Ciclev10025536m.g Citrus clementina HOM05D003733 ORTHO05D004035 1.4e-58 231.5 466 39.3
Manes.12G120000 Manihot esculenta HOM05D003733 ORTHO05D004035 1.4e-58 231.5 390 44.9
ClCG01G018090 Citrullus lanatus HOM05D003733 ORTHO05D008786 4.0e-58 229.9 414 44.7
vmacro20437 Vaccinium macrocarpon HOM05D003733 ORTHO05D004035 2.6e-57 227.3 440 41.8
Aqoxy4G03244 Aquilegia oxysepala HOM05D003733 ORTHO05D004035 3.4e-57 226.9 419 39.9
CAN.G1061.16 Capsicum annuum HOM05D003733 ORTHO05D004035 1.7e-56 224.6 456 41.7
DCAR_025843 Daucus carota HOM05D003733 ORTHO05D004035 6.4e-56 222.6 434 43.8
Nitab4.5_0000396g0250 Nicotiana tabacum HOM05D003733 ORTHO05D004035 6.4e-56 222.6 448 42.9
Duzib264G0286 Durio zibethinus HOM05D003733 ORTHO05D004035 1.4e-55 221.5 456 44.7
Potri.005G148700 Populus trichocarpa HOM05D003733 ORTHO05D004035 3.2e-55 220.3 457 43.1
PGR102G0988 Punica granatum HOM05D003733 ORTHO05D004035 1.6e-54 218.0 483 37.5
PGSC0003DMG400030618 Solanum tuberosum HOM05D003733 ORTHO05D004035 2.1e-54 217.6 452 40.9
Migut.L00442 Erythranthe guttata HOM05D003733 ORTHO05D004035 6.0e-54 216.1 466 39.3
Manes.13G105200 Manihot esculenta HOM05D003733 ORTHO05D004035 1.3e-53 214.9 377 42.4
Sopen02g036340 Solanum pennellii HOM05D003733 ORTHO05D004035 2.3e-53 214.2 415 39.0
CiPaw.12G004100 Carya illinoinensis HOM05D003733 ORTHO05D004035 2.5e-52 210.7 340 47.1
Oeu054739.1 Olea europaea HOM05D003733 ORTHO05D004035 2.5e-52 210.7 404 38.6
CANSAT01G3253 Cannabis sativa HOM05D003733 ORTHO05D004035 8.1e-51 205.7 460 40.9
SalBow7G4044 Salvia bowleyana HOM05D003733 ORTHO05D004035 5.3e-50 203.0 431 38.5
Duzib147G1539 Durio zibethinus HOM05D003733 ORTHO05D004035 9.0e-50 202.2 403 43.9
HanXRQChr17g0561681 Helianthus annuus HOM05D003733 ORTHO05D004035 2.0e-49 201.1 438 37.4
Cc07_g07720 Coffea canephora HOM05D003733 ORTHO05D004035 2.2e-48 197.6 438 35.8
MELO3C007686.2 Cucumis melo HOM05D003733 ORTHO05D004035 5.5e-47 193.0 458 41.7
CsaV3_6G044630 Cucumis sativus L. HOM05D003733 ORTHO05D004035 3.5e-46 190.3 465 40.9
CSS0020555 Camellia sinensis var. sinensis HOM05D003733 ORTHO05D004035 1.9e-44 184.5 335 41.5
Nitab4.5_0000465g0130 Nicotiana tabacum HOM05D003733 ORTHO05D004035 3.3e-44 183.7 501 35.5
MD02G1269400 Malus domestica HOM05D003733 ORTHO05D004035 4.3e-44 183.3 411 38.9
Gohir.A02G147000 Gossypium hirsutum HOM05D003733 ORTHO05D004035 5.6e-44 183.0 482 41.9
Nitab4.5_0014307g0010 Nicotiana tabacum HOM05D003733 ORTHO05D004035 7.4e-44 182.6 501 35.5
MSTRG.3501 Avicennia marina HOM05D003733 ORTHO05D004035 1.3e-43 181.8 434 35.3
Gorai.003G035000 Gossypium raimondii HOM05D003733 ORTHO05D004035 3.7e-43 180.3 545 40.7
SalBow5G1957 Salvia bowleyana HOM05D003733 ORTHO05D004035 3.7e-43 180.3 451 35.5
Gohir.D03G033400 Gossypium hirsutum HOM05D003733 ORTHO05D004035 4.8e-43 179.9 547 41.3
Sed0014908 Sechium edule HOM05D003733 ORTHO05D004035 1.1e-42 178.7 494 38.7
THA.LOC104804189 Tarenaya hassleriana HOM05D003733 ORTHO05D004035 1.1e-42 178.7 494 35.8
COL.COLO4_11664 Corchorus olitorius HOM05D000513 ORTHO05D008786 1.8e-42 177.9 496 42.5
Nitab4.5_0000093g0190 Nicotiana tabacum HOM05D003733 ORTHO05D004035 5.3e-42 176.4 419 38.4
Eucgr.D00182 Eucalyptus grandis HOM05D003733 ORTHO05D004035 3.4e-41 173.7 533 34.5
Peaxi162Scf00118g00109 Petunia axillaris HOM05D003733 ORTHO05D004035 4.5e-41 173.3 544 34.9
CSS0006986 Camellia sinensis var. sinensis HOM05D003733 ORTHO05D004035 1.0e-40 172.2 340 39.4
PSO832G4530 Papaver somniferum HOM05D003733 ORTHO05D004035 1.3e-40 171.8 425 34.8
HanXRQChr12g0366081 Helianthus annuus HOM05D003733 ORTHO05D004035 1.9e-39 167.9 410 36.1
PSO210G1228 Papaver somniferum HOM05D003733 ORTHO05D004035 7.1e-39 166.0 421 34.2
BcaB06g27818 Brassica carinata HOM05D003733 ORTHO05D004035 1.6e-38 164.9 472 37.5
Aa31LG7G14100 Aethionema arabicum HOM05D003733 ORTHO05D004035 2.7e-38 164.1 540 30.7
PSO782G1301 Papaver somniferum HOM05D003733 ORTHO05D004035 2.7e-38 164.1 465 36.3
PSO761G0336 Papaver somniferum HOM05D003733 ORTHO05D004035 4.6e-38 163.3 425 33.6
Cpa.g.sc129.28 Carica papaya HOM05D003733 ORTHO05D004035 2.3e-37 161.0 409 35.7
Sp4g01710 Schrenkiella parvula HOM05D003733 ORTHO05D004035 3.9e-37 160.2 472 32.4
THA.LOC104807653 Tarenaya hassleriana HOM05D003733 ORTHO05D004035 1.5e-36 158.3 554 29.8
Sc03g0000640 Simmondsia chinensis HOM05D003733 ORTHO05D004035 3.3e-36 157.1 462 31.6
CAN.G11.21 Capsicum annuum HOM05D003733 ORTHO05D004035 7.4e-36 156.0 547 32.7
AL4G12240 Arabidopsis lyrata HOM05D003733 ORTHO05D004035 9.7e-36 155.6 491 32.0
Sed0009716 Sechium edule HOM05D003733 ORTHO05D004035 1.6e-35 154.8 413 40.2
C08p40430 Brassica napus HOM05D003733 ORTHO05D004035 2.2e-35 154.5 491 34.2
BolC8t51612H Brassica oleracea HOM05D003733 ORTHO05D004035 2.2e-35 154.5 491 34.2
Solyc02g091730.3 Solanum lycopersicum HOM05D003733 ORTHO05D004035 4.8e-35 153.3 320 37.2
C04p52030 Brassica napus HOM05D002219 ORTHO05D002713 6.3e-35 152.9 468 37.4
BolC4t26775H Brassica oleracea HOM05D003733 ORTHO05D004035 8.2e-35 152.5 477 33.5
BraA04t17347Z Brassica rapa HOM05D003733 ORTHO05D004035 8.2e-35 152.5 471 37.8
MBI16_g20893_MAGBIO Magnolia biondii HOM05D003733 ORTHO05D004035 8.2e-35 152.5 192 49.0
Oeu054741.2 Olea europaea HOM05D003733 ORTHO05D004035 1.1e-34 152.1 422 33.9
ATR0706G065 Amborella trichopoda HOM05D003733 ORTHO05D004035 6.9e-34 149.4 417 36.5
A04p17190 Brassica napus HOM05D002219 ORTHO05D002713 2.6e-33 147.5 472 37.3
unitig_0.g2606 Utricularia gibba HOM05D003733 ORTHO05D004035 2.6e-33 147.5 417 35.5
ATR0584G133 Amborella trichopoda HOM05D003733 ORTHO05D004035 4.5e-33 146.7 429 34.7
AT2G22720 Arabidopsis thaliana HOM05D003733 ORTHO05D004035 1.7e-32 144.8 508 33.9
SGA_v2.0_scaffold13G06400 Striga asiatica HOM05D003733 ORTHO05D004035 1.1e-31 142.1 432 38.9
A09p57340 Brassica napus HOM05D003733 ORTHO05D004035 1.9e-31 141.4 493 32.7
ECA233G0477 Erigeron canadensis HOM05D003733 ORTHO05D004035 2.5e-31 141.0 479 35.7
Hund23622 Selenicereus undatus HOM05D003733 ORTHO05D004035 4.2e-31 140.2 467 33.6
CARHR114000 Cardamine hirsuta HOM05D003733 ORTHO05D004035 1.6e-30 138.3 487 31.4
SGA_v2.0_scaffold174G39242 Striga asiatica HOM05D003733 ORTHO05D004035 1.6e-30 138.3 447 32.4
Solyc03g043760.4 Solanum lycopersicum HOM05D003733 ORTHO05D004035 6.1e-30 136.3 545 29.7
Sopen03g007620 Solanum pennellii HOM05D003733 ORTHO05D004035 2.3e-29 134.4 546 29.3
Hma1.2p1_0723F.1_g208790 Hydrangea macrophylla HOM05D003733 ORTHO05D004035 8.8e-29 132.5 220 42.7
Lsat_1_v5_gn_8_34760 Lactuca sativa HOM05D003733 ORTHO05D004035 8.8e-29 132.5 440 32.5
BraA09t41127Z Brassica rapa HOM05D003733 ORTHO05D004035 2.5e-28 131.0 482 34.2
HPP92_024603 Vanilla planifolia HOM05D003733 ORTHO05D004035 5.7e-28 129.8 430 31.9
PGSC0003DMG400016686 Solanum tuberosum HOM05D003733 ORTHO05D004035 1.3e-27 128.6 367 34.9
EL10As13g24049 Beta vulgaris HOM05D003733 ORTHO05D004035 6.3e-27 126.3 441 30.2
Carub.0004s0185 Capsella rubella HOM05D003733 ORTHO05D004035 4.1e-26 123.6 507 32.9
SEGI_33741 Sequoiadendron giganteum HOM05D003733 ORTHO05D004035 2.0e-25 121.3 430 32.1
Sc16g0000790 Simmondsia chinensis HOM05D003733 ORTHO05D004035 1.3e-24 118.6 148 50.0
CDE10G0903 Ceratophyllum demersum HOM05D003733 ORTHO05D004035 5.0e-24 116.7 468 31.2
AUR62027209 Chenopodium quinoa HOM05D003733 ORTHO05D004035 6.5e-24 116.3 423 30.0
MBI16_g41329_MAGBIO Magnolia biondii HOM05D003733 ORTHO05D004035 1.6e-22 111.7 378 32.8
AUR62003259 Chenopodium quinoa HOM05D003733 ORTHO05D004035 2.7e-22 110.9 422 29.1
CAN.G630.65 Capsicum annuum HOM05D003733 ORTHO05D004035 1.1e-20 105.5 441 31.7
CARHR246250 Cardamine hirsuta HOM05D003733 ORTHO05D004035 9.7e-20 102.4 412 30.6
Os11g0296800 Oryza sativa ssp. japonica HOM05D003733 ORTHO05D004035 3.7e-19 100.5 492 26.4
C01p01330 Brassica napus HOM05D003733 ORTHO05D004035 4.8e-19 100.1 418 28.5
SHI12093 Sapria himalayana HOM05D003733 ORTHO05D004035 8.2e-19 99.4 157 42.7
CDE10G0649 Ceratophyllum demersum HOM05D003733 ORTHO05D004035 1.4e-18 98.6 470 28.7
unitig_88.g27718 Utricularia gibba HOM05D003733 ORTHO05D004035 1.8e-18 98.2 456 29.6
Thhalv10000080m.g Eutrema salsugineum HOM05D003733 ORTHO05D004035 2.0e-17 94.7 506 30.4
BolC1t00129H Brassica oleracea HOM05D003733 ORTHO05D004035 1.0e-16 92.4 419 28.2
Prupe.1G068500 Prunus persica HOM05D003733 ORTHO05D004035 3.8e-16 90.5 141 44.0
MD15G1405500 Malus domestica HOM05D005427 ORTHO05D006461 1.9e-15 88.2 105 55.2
Aqoxy6G00872 Aquilegia oxysepala HOM05D003733 ORTHO05D004035 3.2e-15 87.4 414 28.7
SEGI_29083 Sequoiadendron giganteum HOM05D003733 ORTHO05D004035 3.2e-15 87.4 505 25.1
Dinv36994 Davidia involucrata HOM05D003733 ORTHO05D004035 7.2e-15 86.3 139 40.3
Prupe.2G308100 Prunus persica HOM05D003733 ORTHO05D004035 1.2e-14 85.5 133 43.6
A01p01170 Brassica napus HOM05D003733 ORTHO05D004035 3.6e-14 84.0 414 29.0
BcaNung00967 Brassica carinata HOM05D003733 ORTHO05D004035 1.0e-13 82.4 418 27.8
AT4G37860 Arabidopsis thaliana HOM05D003733 ORTHO05D004035 1.4e-13 82.0 225 34.7
AL7G12820 Arabidopsis lyrata HOM05D003733 ORTHO05D004035 5.2e-13 80.1 192 32.8
Zm00001eb429410 Zea mays HOM05D003733 ORTHO05D004035 5.2e-13 80.1 513 24.8
Manes.06G161600 Manihot esculenta HOM05D003733 ORTHO05D004035 2.0e-12 78.2 384 25.8
CANSAT11G2490 Cannabis sativa HOM05D003733 ORTHO05D004035 3.3e-12 77.4 439 29.6
BraA01t00115Z Brassica rapa HOM05D003733 ORTHO05D004035 1.3e-11 75.5 421 28.5
Lalb_Chr05g0216141 Lupinus albus HOM05D003733 ORTHO05D004035 6.3e-11 73.2 88 83.0
Os02g0664400 Oryza sativa ssp. japonica HOM05D003733 ORTHO05D004035 8.2e-11 72.8 420 26.0
Potri.001G257300 Populus trichocarpa HOM05D003733 ORTHO05D004035 1.2e-09 68.9 421 27.1
Sabra16G0155500 Salix brachista HOM05D003733 ORTHO05D004035 5.9e-09 66.6 201 34.8
Sabra16G0157300 Salix brachista HOM05D003733 ORTHO05D004035 1.7e-08 65.1 201 35.3
Sp7g35500 Schrenkiella parvula HOM05D003733 ORTHO05D004035 2.9e-08 64.3 372 25.8
Pp3c20_3960 Physcomitrium patens HOM05D025130 ORTHO05D030134 5.0e-08 63.5 203 29.6
Pp3c20_4020 Physcomitrium patens HOM05D025130 ORTHO05D030134 5.0e-08 63.5 203 29.6
SGA_v2.0_scaffold55G19776 Striga asiatica HOM05D003733 ORTHO05D004035 5.0e-08 63.5 159 30.2
Oeu012608.1 Olea europaea HOM05D003733 ORTHO05D004035 6.5e-08 63.2 84 46.4
CARHR207720 Cardamine hirsuta HOM05D003733 ORTHO05D004035 8.5e-08 62.8 144 33.3
AagrBONN_evm.TU.Sc2ySwM_117.778 Anthoceros agrestis HOM05D025130 ORTHO05D004035 5.5e-07 60.1 194 30.4


User provided reference genes

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