Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0381361 Lupinus albus HOM05D006292 ORTHO05D006110 2.0e-58 228.8 109 100.0
Lalb_Chr05g0216081 Lupinus albus HOM05D006292 ORTHO05D006110 1.3e-44 183.0 110 82.7
Lalb_Chr09g0325661 Lupinus albus HOM05D006292 ORTHO05D006110 4.8e-44 181.0 110 83.6
Lj2g0014920 Lotus japonicus HOM05D006292 ORTHO05D006110 2.2e-36 155.6 117 64.1
Ca_06080_v3 Cicer arietinum L. HOM05D006292 ORTHO05D006110 2.7e-34 148.7 108 66.7
Psat2g135960 Pisum sativum HOM05D006292 ORTHO05D006110 3.8e-33 144.8 108 65.7
Glyma.09G204400 Glycine max HOM05D006292 ORTHO05D006110 4.2e-32 141.4 105 65.7
Medtr5g030470 Medicago truncatula HOM05D006292 ORTHO05D006110 8.0e-31 137.1 110 63.6
Glyma.01G018500 Glycine max HOM05D006292 ORTHO05D006110 4.0e-30 134.8 108 63.9
TPR.G3912 Trifolium pratense HOM05D006292 ORTHO05D006110 1.2e-29 133.3 99 66.7
Phvul.002G141600 Phaseolus vulgaris HOM05D006292 ORTHO05D006110 1.4e-27 126.3 108 62.0
VMungo1215G0846 Vigna mungo HOM05D006292 ORTHO05D006110 6.8e-22 107.5 124 50.8
Manes.15G181600 Manihot esculenta HOM05D006292 ORTHO05D006110 3.1e-19 98.6 104 53.8
RcHm_v2.0_Chr7g0209741 Rosa chinensis HOM05D006292 ORTHO05D006110 1.2e-18 96.7 116 52.6
arahy.Tifrunner.gnm1.ann1.92QZ6T Arachis hypogaea HOM05D006292 ORTHO05D006110 7.8e-18 94.0 107 45.8
arahy.Tifrunner.gnm1.ann1.46AG3A Arachis hypogaea HOM05D006292 ORTHO05D006110 2.3e-17 92.4 107 44.9
Glyma.07G112800 Glycine max HOM05D006292 ORTHO05D006110 3.8e-17 91.7 115 48.7
MD16G1274300 Malus domestica HOM05D006292 ORTHO05D006110 3.8e-17 91.7 122 47.5
FAN13G0922 Fragaria x ananassa HOM05D006292 ORTHO05D006110 6.6e-17 90.9 115 48.7
Lj4g0026533 Lotus japonicus HOM05D006292 ORTHO05D006110 8.6e-17 90.5 107 49.5
TPR.G28248 Trifolium pratense HOM05D006292 ORTHO05D006110 1.1e-16 90.1 109 46.8
arahy.Tifrunner.gnm1.ann1.L0PZ9J Arachis hypogaea HOM05D006292 ORTHO05D006110 1.9e-16 89.4 100 54.0
arahy.Tifrunner.gnm1.ann1.RC41H8 Arachis hypogaea HOM05D006292 ORTHO05D006110 1.9e-16 89.4 100 54.0
TWI60G0215 Tripterygium wilfordii HOM05D006292 ORTHO05D006110 2.5e-16 89.0 109 50.5
FvH4_5g22090 Fragaria vesca HOM05D006292 ORTHO05D006110 3.3e-16 88.6 115 47.8
Thecc.03G227700 Theobroma cacao HOM05D006292 ORTHO05D006110 5.6e-16 87.8 114 46.5
Potri.001G142250 Populus trichocarpa HOM05D006292 ORTHO05D006110 7.3e-16 87.4 103 51.5
Prupe.5G036400 Prunus persica HOM05D006292 ORTHO05D006110 7.3e-16 87.4 123 44.7
Potri.003G092100 Populus trichocarpa HOM05D006292 ORTHO05D006110 2.8e-15 85.5 116 46.6
Sed0015746 Sechium edule HOM05D006292 ORTHO05D006110 3.6e-15 85.1 102 51.0
TWI81G0365 Tripterygium wilfordii HOM05D006292 ORTHO05D006110 3.6e-15 85.1 107 50.5
TAR636G3028 Trochodendron aralioides HOM05D006292 ORTHO05D006110 3.6e-15 85.1 113 44.2
CSS0025259 Camellia sinensis var. sinensis HOM05D006292 ORTHO05D006110 4.7e-15 84.7 110 44.5
Ciclev10013401m.g Citrus clementina HOM05D006292 ORTHO05D006110 4.7e-15 84.7 117 46.2
Medtr8g067270 Medicago truncatula HOM05D006292 ORTHO05D006110 4.7e-15 84.7 112 44.6
Hma1.2p1_2704F.1_g327130 Hydrangea macrophylla HOM05D006292 ORTHO05D006110 8.0e-15 84.0 115 40.9
Glyma.03G113900 Glycine max HOM05D006292 ORTHO05D006110 1.4e-14 83.2 114 46.5
Hma1.2p1_1063F.1_g253570 Hydrangea macrophylla HOM05D006292 ORTHO05D006110 1.4e-14 83.2 115 40.9
Peaxi162Scf00045g00010 Petunia axillaris HOM05D006292 ORTHO05D006110 1.8e-14 82.8 112 42.9
Psat4g118000 Pisum sativum HOM05D006292 ORTHO05D006110 4.0e-14 81.6 108 46.3
Dinv25216 Davidia involucrata HOM05D000567 ORTHO05D000767 1.2e-13 80.1 91 47.3
COL.COLO4_17031 Corchorus olitorius HOM05D006292 ORTHO05D006110 1.5e-13 79.7 115 45.2
Rhsim07G0127000 Rhododendron simsii HOM05D006292 ORTHO05D006110 2.6e-13 79.0 115 40.9
Duzib205G0138 Durio zibethinus HOM05D006292 ORTHO05D006110 4.4e-13 78.2 116 44.8
Atru.chr6.1708 Acer truncatum HOM05D006292 ORTHO05D006110 7.5e-13 77.4 100 42.0
PGSC0003DMG400001160 Solanum tuberosum HOM05D006292 ORTHO05D006110 9.8e-13 77.0 107 40.2
Duzib068G0707 Durio zibethinus HOM05D006292 ORTHO05D006110 1.7e-12 76.3 112 42.9
PGR031G2877 Punica granatum HOM05D006292 ORTHO05D006110 1.7e-12 76.3 115 44.3
CSS0029921 Camellia sinensis var. sinensis HOM05D006292 ORTHO05D006110 2.9e-12 75.5 110 41.8
CSS0047178 Camellia sinensis var. sinensis HOM05D006292 ORTHO05D006110 2.9e-12 75.5 110 41.8
CiPaw.12G063900 Carya illinoinensis HOM05D006292 ORTHO05D006110 3.7e-12 75.1 113 39.8
ClCG10G001600 Citrullus lanatus HOM05D006292 ORTHO05D006110 4.9e-12 74.7 110 42.7
MELO3C013852.2 Cucumis melo HOM05D006292 ORTHO05D006110 4.9e-12 74.7 112 45.5
Sopen08g001060 Solanum pennellii HOM05D006292 ORTHO05D006110 6.4e-12 74.3 107 42.1
CsaV3_3G001720 Cucumis sativus L. HOM05D006292 ORTHO05D006110 2.4e-11 72.4 116 44.0
Solyc08g005040.1 Solanum lycopersicum HOM05D006292 ORTHO05D006110 2.4e-11 72.4 107 39.3
Eucgr.D02199 Eucalyptus grandis HOM05D006292 ORTHO05D006110 3.2e-11 72.0 112 42.9
Nn1g08042 Nelumbo nucifera HOM05D006292 ORTHO05D006110 5.4e-11 71.2 110 39.1
Sc07g0008700 Simmondsia chinensis HOM05D006292 ORTHO05D006110 7.0e-11 70.9 103 50.5
CANSAT21G1416 Cannabis sativa HOM05D006292 ORTHO05D006110 1.2e-10 70.1 116 44.8
FAN04G1003 Fragaria x ananassa HOM05D006292 ORTHO05D006110 1.2e-10 70.1 74 51.4
FAN08G0524 Fragaria x ananassa HOM05D006292 ORTHO05D006110 1.2e-10 70.1 74 51.4
FAN18G1495 Fragaria x ananassa HOM05D006292 ORTHO05D006110 1.2e-10 70.1 74 51.4
Peaxi162Scf00460g00032 Petunia axillaris HOM05D006292 ORTHO05D006110 1.2e-10 70.1 99 43.4
Sc01g0007420 Simmondsia chinensis HOM05D006292 ORTHO05D006110 1.2e-10 70.1 136 39.0
Sopen08g025520 Solanum pennellii HOM05D006292 ORTHO05D006110 1.2e-10 70.1 101 43.6
EL10Ac5g12118 Beta vulgaris HOM05D006292 ORTHO05D006110 1.6e-10 69.7 121 41.3
Cpa.g.sc1778.1 Carica papaya HOM05D006292 ORTHO05D006110 2.7e-10 68.9 115 41.7
Thhalv10017673m.g Eutrema salsugineum HOM05D006292 ORTHO05D006110 2.7e-10 68.9 106 41.5
Phvul.010G051800 Phaseolus vulgaris HOM05D006292 ORTHO05D006110 4.6e-10 68.2 128 41.4
AL4G31240 Arabidopsis lyrata HOM05D006292 ORTHO05D006110 6.0e-10 67.8 107 43.9
AUR62007293 Chenopodium quinoa HOM05D043215 ORTHO05D006110 6.0e-10 67.8 115 39.1
Gohir.D09G193100 Gossypium hirsutum HOM05D006292 ORTHO05D006110 6.0e-10 67.8 127 39.4
Actinidia14806 Actinidia chinensis HOM05D000567 ORTHO05D000767 7.8e-10 67.4 73 43.8
Gohir.A09G201400 Gossypium hirsutum HOM05D006292 ORTHO05D006110 7.8e-10 67.4 127 39.4
Solyc08g076940.1 Solanum lycopersicum HOM05D006292 ORTHO05D006110 7.8e-10 67.4 100 44.0
Cc08_g02780 Coffea canephora HOM05D006292 ORTHO05D006110 1.3e-09 66.6 106 44.3
Gorai.006G216600 Gossypium raimondii HOM05D006292 ORTHO05D006110 1.3e-09 66.6 115 40.0
Sp4g17440 Schrenkiella parvula HOM05D006292 ORTHO05D006110 1.3e-09 66.6 103 39.8
Sopen06g021400 Solanum pennellii HOM05D006292 ORTHO05D006110 1.3e-09 66.6 112 37.5
AT2G35215 Arabidopsis thaliana HOM05D006292 ORTHO05D006110 2.3e-09 65.9 107 41.1
Eucgr.E00278 Eucalyptus grandis HOM05D006292 ORTHO05D006110 2.3e-09 65.9 120 40.8
CARHR129380 Cardamine hirsuta HOM05D006292 ORTHO05D006110 3.9e-09 65.1 110 40.0
A04p26770 Brassica napus HOM05D006292 ORTHO05D006110 6.6e-09 64.3 107 42.1
C04p64170 Brassica napus HOM05D006292 ORTHO05D006110 6.6e-09 64.3 107 42.1
BraA04t18181Z Brassica rapa HOM05D006292 ORTHO05D006110 6.6e-09 64.3 107 42.1
BcaC02g07728 Brassica carinata HOM05D006292 ORTHO05D006110 8.6e-09 63.9 107 41.1
BolC4t27900H Brassica oleracea HOM05D006292 ORTHO05D006110 8.6e-09 63.9 107 41.1
THA.LOC104814444 Tarenaya hassleriana HOM05D006292 ORTHO05D006110 1.5e-08 63.2 104 40.4
Peaxi162Scf00615g00065 Petunia axillaris HOM05D034794 ORTHO05D006110 2.5e-08 62.4 107 36.4
Aqoxy3G02346 Aquilegia oxysepala HOM05D006292 ORTHO05D006110 3.3e-08 62.0 104 35.6
Carub.0004s1692 Capsella rubella HOM05D006292 ORTHO05D006110 4.3e-08 61.6 107 39.3
CiPaw.11G093500 Carya illinoinensis HOM05D006292 ORTHO05D006110 4.3e-08 61.6 107 40.2
A05p10540 Brassica napus HOM05D006292 ORTHO05D006110 5.6e-08 61.2 103 36.9
BraA05t19992Z Brassica rapa HOM05D006292 ORTHO05D006110 5.6e-08 61.2 103 36.9
MELO3C003411.2 Cucumis melo HOM05D011808 ORTHO05D006110 5.6e-08 61.2 110 39.1
Lalb_Chr09g0334701 Lupinus albus HOM05D006292 ORTHO05D006110 5.6e-08 61.2 102 41.2
vmacro00329 Vaccinium macrocarpon HOM05D006292 ORTHO05D006110 7.3e-08 60.8 126 35.7
BcaB02g09469 Brassica carinata HOM05D006292 ORTHO05D006110 9.5e-08 60.5 103 36.9
CARHR174730 Cardamine hirsuta HOM05D011808 ORTHO05D006110 9.5e-08 60.5 121 38.0
BcaB06g28832 Brassica carinata HOM05D006292 ORTHO05D006110 1.6e-07 59.7 107 41.1
BcaC02g11625 Brassica carinata HOM05D006292 ORTHO05D006110 2.1e-07 59.3 103 35.9
C04p12960 Brassica napus HOM05D006292 ORTHO05D006110 2.1e-07 59.3 103 35.9
BolC4t22939H Brassica oleracea HOM05D006292 ORTHO05D006110 2.1e-07 59.3 103 35.9
Gohir.A12G208300 Gossypium hirsutum HOM05D006292 ORTHO05D006110 2.8e-07 58.9 108 39.8
Gohir.D12G210900 Gossypium hirsutum HOM05D006292 ORTHO05D006110 4.7e-07 58.2 108 38.9
Gorai.008G226400 Gossypium raimondii HOM05D006292 ORTHO05D006110 4.7e-07 58.2 108 38.9
QL12p005176 Quercus lobata HOM05D006292 ORTHO05D006110 6.2e-07 57.8 117 38.5
BolC4t22949H Brassica oleracea HOM05D006292 ORTHO05D006110 8.0e-07 57.4 103 35.9
Thhalv10001070m.g Eutrema salsugineum HOM05D011808 ORTHO05D006110 8.0e-07 57.4 120 36.7
BcaC03g16885 Brassica carinata HOM05D011808 ORTHO05D006110 1.4e-06 56.6 124 40.3
C02p47820 Brassica napus HOM05D011808 ORTHO05D006110 1.4e-06 56.6 124 40.3
BolC2t10817H Brassica oleracea HOM05D011808 ORTHO05D006110 1.4e-06 56.6 124 40.3
Ah.07g200350 Amaranthus hybridus HOM05D006292 ORTHO05D006110 1.8e-06 56.2 109 38.5
A02p30310 Brassica napus HOM05D011808 ORTHO05D006110 2.3e-06 55.8 124 39.5
BraA02t08046Z Brassica rapa HOM05D011808 ORTHO05D006110 2.3e-06 55.8 124 39.5
Haze_08227 Corylus avellana HOM05D006292 ORTHO05D006110 2.3e-06 55.8 106 37.7
CsaV3_3G049160 Cucumis sativus L. HOM05D006292 ORTHO05D006110 3.1e-06 55.5 111 38.7
Oeu017028.1 Olea europaea HOM05D006292 ORTHO05D006110 3.1e-06 55.5 99 37.4
AT5G46770 Arabidopsis thaliana HOM05D011808 ORTHO05D006110 4.0e-06 55.1 120 35.8
SGA_v2.0_scaffold198G41102 Striga asiatica HOM05D006292 ORTHO05D006110 4.0e-06 55.1 114 34.2
Aa31LG9G15250 Aethionema arabicum HOM05D006292 ORTHO05D006110 5.2e-06 54.7 50 50.0
Sabra01G0110900 Salix brachista HOM05D006292 ORTHO05D006110 8.9e-06 53.9 51 56.9


User provided reference genes

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