Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0380051 Lupinus albus HOM05D001617 ORTHO05D008611 3.5e-112 408.3 203 100.0
Lalb_Chr05g0214811 Lupinus albus HOM05D001617 ORTHO05D008611 5.6e-86 321.2 184 89.1
Glyma.01G158500 Glycine max HOM05D001617 ORTHO05D008611 3.9e-79 298.5 191 78.5
TPR.G24692 Trifolium pratense HOM05D001617 ORTHO05D008611 4.3e-78 295.0 184 79.3
Psat4g142640 Pisum sativum HOM05D001617 ORTHO05D008611 1.6e-77 293.1 184 79.9
Glyma.11G086100 Glycine max HOM05D001617 ORTHO05D008611 2.8e-77 292.4 184 81.0
Ca_24984_v3 Cicer arietinum L. HOM05D001617 ORTHO05D008611 1.8e-76 289.7 184 78.3
TPR.G27884 Trifolium pratense HOM05D001617 ORTHO05D008611 1.5e-75 286.6 185 77.8
Phvul.002G116800 Phaseolus vulgaris HOM05D001617 ORTHO05D008611 2.4e-73 279.3 184 75.0
arahy.Tifrunner.gnm1.ann1.00REGV Arachis hypogaea HOM05D001617 ORTHO05D008611 3.0e-71 272.3 179 74.3
arahy.Tifrunner.gnm1.ann1.P3NXZX Arachis hypogaea HOM05D001617 ORTHO05D008611 3.0e-71 272.3 179 74.3
Lj2g0016890 Lotus japonicus HOM05D001617 ORTHO05D008611 2.1e-69 266.2 182 75.3
Medtr7g006210 Medicago truncatula HOM05D001617 ORTHO05D008611 1.4e-68 263.5 177 75.7
Haze_03607 Corylus avellana HOM05D001617 ORTHO05D008611 1.1e-57 227.3 174 63.2
Medtr8g446540 Medicago truncatula HOM05D001617 ORTHO05D008611 2.4e-57 226.1 159 73.6
MD02G1114800 Malus domestica HOM05D001617 ORTHO05D008611 9.3e-57 224.2 182 61.0
Potri.018G026700 Populus trichocarpa HOM05D001617 ORTHO05D008611 2.7e-56 222.6 180 57.2
Prupe.7G183400 Prunus persica HOM05D001617 ORTHO05D008611 2.7e-56 222.6 179 61.5
MD15G1230700 Malus domestica HOM05D001617 ORTHO05D008611 8.7e-55 217.6 182 59.3
FAN19G1097 Fragaria x ananassa HOM05D001617 ORTHO05D002495 9.6e-54 214.2 183 58.5
FvH4_1g10271 Fragaria vesca HOM05D001617 ORTHO05D008611 1.6e-53 213.4 183 58.5
RcHm_v2.0_Chr2g0097101 Rosa chinensis HOM05D001617 ORTHO05D008611 2.8e-53 212.6 183 57.9
QL06p053003 Quercus lobata HOM05D001617 ORTHO05D008611 6.9e-52 208.0 184 58.2
VMungo1215G1547 Vigna mungo HOM05D004017 ORTHO05D004612 3.4e-51 205.7 127 80.3
Lj2g0001157 Lotus japonicus HOM05D001617 ORTHO05D008611 3.8e-50 202.2 182 62.1
Manes.03G014200 Manihot esculenta HOM05D001617 ORTHO05D008611 1.4e-49 200.3 180 53.3
Sc07g0001380 Simmondsia chinensis HOM05D001617 ORTHO05D008611 2.7e-48 196.1 174 56.9
Atru.chr3.130 Acer truncatum HOM05D001617 ORTHO05D008611 6.0e-48 194.9 176 54.5
Duzib147G0359 Durio zibethinus HOM05D001617 ORTHO05D008611 6.0e-48 194.9 185 54.1
Sabra06G0199600 Salix brachista HOM05D001617 ORTHO05D008611 7.9e-48 194.5 177 52.5
CSS0049801 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 2.3e-47 193.0 170 55.3
Dinv40191 Davidia involucrata HOM05D001617 ORTHO05D008611 2.3e-47 193.0 179 55.3
FAN23G1150 Fragaria x ananassa HOM05D001617 ORTHO05D002495 6.6e-47 191.4 219 48.4
CSS0040657 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 2.5e-46 189.5 170 55.3
Hma1.2p1_0300F.1_g117970 Hydrangea macrophylla HOM05D001617 ORTHO05D008611 4.3e-46 188.7 174 57.5
Nn5g30995 Nelumbo nucifera HOM05D001617 ORTHO05D008611 4.3e-46 188.7 179 57.0
Ciclev10026581m.g Citrus clementina HOM05D001617 ORTHO05D008611 5.6e-46 188.3 171 53.2
Eucgr.I02221 Eucalyptus grandis HOM05D001617 ORTHO05D008611 5.6e-46 188.3 168 54.2
CiPaw.08G181900 Carya illinoinensis HOM05D001617 ORTHO05D008611 7.3e-46 188.0 175 54.3
Thecc.01G005100 Theobroma cacao HOM05D001617 ORTHO05D008611 7.3e-46 188.0 183 52.5
CsaV3_3G000210 Cucumis sativus L. HOM05D001617 ORTHO05D008611 9.6e-46 187.6 178 55.1
Lsat_1_v5_gn_7_41980 Lactuca sativa HOM05D001617 ORTHO05D008611 1.6e-45 186.8 185 49.7
HanXRQChr03g0061381 Helianthus annuus HOM05D001617 ORTHO05D008611 4.8e-45 185.3 171 53.2
Sed0024019 Sechium edule HOM05D001617 ORTHO05D008611 4.8e-45 185.3 184 53.3
TAR625G0652 Trochodendron aralioides HOM05D001617 ORTHO05D008611 4.8e-45 185.3 177 55.9
Potri.006G255301 Populus trichocarpa HOM05D001617 ORTHO05D008611 3.1e-44 182.6 180 48.3
Actinidia22895 Actinidia chinensis HOM05D001617 ORTHO05D008611 5.3e-44 181.8 172 52.9
Actinidia17356 Actinidia chinensis HOM05D001617 ORTHO05D008611 1.2e-43 180.6 166 55.4
Aqoxy6G01611 Aquilegia oxysepala HOM05D001617 ORTHO05D008611 5.8e-43 178.3 168 53.6
AUR62003746 Chenopodium quinoa HOM05D001617 ORTHO05D008611 1.7e-42 176.8 184 45.1
PSO210G2591 Papaver somniferum HOM05D001617 ORTHO05D008611 3.8e-42 175.6 177 52.0
ECA240G2496 Erigeron canadensis HOM05D001617 ORTHO05D008611 1.4e-41 173.7 178 49.4
AUR62002049 Chenopodium quinoa HOM05D001617 ORTHO05D008611 7.1e-41 171.4 184 45.1
Rhsim10G0195300 Rhododendron simsii HOM05D001617 ORTHO05D008611 7.1e-41 171.4 174 52.3
Solyc02g038814.1 Solanum lycopersicum HOM05D001617 ORTHO05D008611 3.5e-40 169.1 177 52.0
Sopen02g012580 Solanum pennellii HOM05D001617 ORTHO05D008611 3.5e-40 169.1 177 52.0
Nitab4.5_0001365g0060 Nicotiana tabacum HOM05D001617 ORTHO05D008611 3.0e-39 166.0 184 50.5
THA.LOC104819716 Tarenaya hassleriana HOM05D001617 ORTHO05D008611 3.0e-39 166.0 179 48.6
Gohir.A02G178000 Gossypium hirsutum HOM05D001617 ORTHO05D008611 5.1e-39 165.2 173 50.3
PSO761G0409 Papaver somniferum HOM05D001617 ORTHO05D008611 5.1e-39 165.2 182 48.4
Carub.0007s0479 Capsella rubella HOM05D001617 ORTHO05D008611 8.7e-39 164.5 175 49.7
Gorai.003G002100 Gossypium raimondii HOM05D001617 ORTHO05D008611 1.1e-38 164.1 173 52.0
Gohir.D03G001800 Gossypium hirsutum HOM05D001617 ORTHO05D008611 1.5e-38 163.7 173 51.4
TWI09G0535 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 1.5e-38 163.7 169 48.5
AT4G35530 Arabidopsis thaliana HOM05D001617 ORTHO05D008611 2.5e-38 162.9 188 47.3
Aa31LG6G12490 Aethionema arabicum HOM05D001617 ORTHO05D008611 9.6e-38 161.0 182 46.7
C07p61220 Brassica napus HOM05D001617 ORTHO05D008611 9.6e-38 161.0 183 47.5
BolC7t46548H Brassica oleracea HOM05D001617 ORTHO05D008611 9.6e-38 161.0 183 47.5
Thhalv10026286m.g Eutrema salsugineum HOM05D001617 ORTHO05D008611 9.6e-38 161.0 181 48.1
Migut.H02499 Erythranthe guttata HOM05D001617 ORTHO05D008611 1.3e-37 160.6 181 48.1
AL7G15630 Arabidopsis lyrata HOM05D001617 ORTHO05D008611 2.1e-37 159.8 188 45.7
GSVIVG01013391001 Vitis vinifera HOM05D001617 ORTHO05D008611 2.1e-37 159.8 177 48.6
PGR119G0287 Punica granatum HOM05D001617 ORTHO05D008611 2.8e-37 159.5 170 47.6
A01p03080 Brassica napus HOM05D001617 ORTHO05D008611 6.2e-37 158.3 184 47.3
Nitab4.5_0000467g0050 Nicotiana tabacum HOM05D001617 ORTHO05D008611 6.2e-37 158.3 201 46.3
BraA01t00292Z Brassica rapa HOM05D001617 ORTHO05D008611 1.8e-36 156.8 184 46.7
Peaxi162Scf00580g00110 Petunia axillaris HOM05D001617 ORTHO05D008611 1.8e-36 156.8 179 48.6
Sp7g33310 Schrenkiella parvula HOM05D001617 ORTHO05D008611 5.3e-36 155.2 181 45.9
SGA_v2.0_scaffold280G46856 Striga asiatica HOM05D001617 ORTHO05D008611 9.0e-36 154.5 184 47.8
Cc07_g11900 Coffea canephora HOM05D001617 ORTHO05D008611 2.0e-35 153.3 172 48.8
ATR0807G073 Amborella trichopoda HOM05D001617 ORTHO05D008611 3.4e-35 152.5 172 50.0
A03p63650 Brassica napus HOM05D001617 ORTHO05D008611 1.7e-34 150.2 181 45.9
BraA03t15436Z Brassica rapa HOM05D001617 ORTHO05D008611 1.7e-34 150.2 181 45.9
ClCG10G000190 Citrullus lanatus HOM05D001617 ORTHO05D008611 1.7e-34 150.2 199 43.2
PGSC0003DMG400017488 Solanum tuberosum HOM05D001617 ORTHO05D008611 3.8e-34 149.1 200 46.5
BcaNung03634 Brassica carinata HOM05D001617 ORTHO05D008611 4.9e-34 148.7 178 45.5
COL.COLO4_22553 Corchorus olitorius HOM05D001617 ORTHO05D008611 1.4e-33 147.1 183 41.0
CANSAT25G0226 Cannabis sativa HOM05D001617 ORTHO05D008611 9.3e-33 144.4 182 45.6
Hund03599 Selenicereus undatus HOM05D001617 ORTHO05D008611 9.3e-33 144.4 178 47.2
MELO3C013716.2 Cucumis melo HOM05D001617 ORTHO05D008611 1.6e-32 143.7 95 71.6
CARHR243860 Cardamine hirsuta HOM05D001617 ORTHO05D008611 3.5e-32 142.5 96 67.7
TWI73G0916 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 6.0e-32 141.7 169 45.0
Os05g0165400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 1.0e-31 141.0 167 48.5
HPP92_001135 Vanilla planifolia HOM05D001617 ORTHO05D008611 1.0e-31 141.0 177 42.4
Manes.03G014750 Manihot esculenta HOM05D001617 ORTHO05D008611 4.3e-30 135.6 176 43.2
Zm00001eb123330 Zea mays HOM05D001617 ORTHO05D008611 9.6e-30 134.4 172 47.7
EL10Ac6g15051 Beta vulgaris HOM05D001617 ORTHO05D008611 3.1e-28 129.4 219 37.0
QL02p015100 Quercus lobata HOM05D001617 ORTHO05D008611 3.1e-28 129.4 162 41.4
SalBow8G0576 Salvia bowleyana HOM05D001617 ORTHO05D008611 3.4e-27 125.9 158 44.9
BcaNung00584 Brassica carinata HOM05D001617 ORTHO05D008611 1.7e-26 123.6 180 42.8
Haze_22828 Corylus avellana HOM05D006218 ORTHO05D007338 3.8e-26 122.5 89 62.9
CDE05G1602 Ceratophyllum demersum HOM05D001617 ORTHO05D008611 5.0e-26 122.1 148 43.9
FAN26G0309 Fragaria x ananassa HOM05D001617 ORTHO05D002495 8.4e-26 121.3 86 67.4
SEGI_30027 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 1.2e-24 117.5 179 35.8
TAR381G0965 Trochodendron aralioides HOM05D001617 ORTHO05D008611 2.3e-23 113.2 78 70.5
SEGI_12529 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 1.1e-22 110.9 101 53.5
QL02p015033 Quercus lobata HOM05D001617 ORTHO05D008611 3.3e-22 109.4 161 38.5
C01p03430 Brassica napus HOM05D001617 ORTHO05D008611 4.8e-21 105.5 200 37.0
BolC1t00330H Brassica oleracea HOM05D001617 ORTHO05D008611 4.8e-21 105.5 200 37.0
Pp3c25_310 Physcomitrium patens HOM05D001617 ORTHO05D008611 2.9e-18 96.3 108 45.4
Medtr7g005770 Medicago truncatula HOM05D001617 ORTHO05D008611 6.5e-18 95.1 78 61.5
arahy.Tifrunner.gnm1.ann1.JF0LYH Arachis hypogaea HOM05D001617 ORTHO05D008611 1.1e-17 94.4 86 59.3
Mapoly0064s0006 Marchantia polymorpha HOM05D001617 ORTHO05D008611 1.1e-17 94.4 99 47.5
unitig_46.g18791 Utricularia gibba HOM05D001617 ORTHO05D008611 1.9e-17 93.6 180 33.9
AagrBONN_evm.TU.Sc2ySwM_368.1506 Anthoceros agrestis HOM05D001617 ORTHO05D008611 4.6e-16 89.0 101 44.6
Os01g0166400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 3.9e-15 85.9 68 57.4
SHI18558 Sapria himalayana HOM05D000291 ORTHO05D001358 4.1e-12 75.9 142 34.5
FAN28G0538 Fragaria x ananassa HOM05D001617 ORTHO05D002495 1.5e-11 73.9 86 50.0
CBR_g38242 Chara braunii HOM05D001617 ORTHO05D008611 2.2e-10 70.1 84 40.5


User provided reference genes

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