Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0379971 Lupinus albus HOM05D005805 ORTHO05D007226 2.0e-192 675.6 344 100.0
Glyma.11G026600 Glycine max HOM05D005805 ORTHO05D007226 8.1e-154 547.4 360 79.4
VMungo1215G3124 Vigna mungo HOM05D005805 ORTHO05D007226 8.1e-154 547.4 347 81.6
Lalb_Chr05g0214771 Lupinus albus HOM05D005805 ORTHO05D007226 9.9e-152 540.4 343 81.9
Ca_06662_v3 Cicer arietinum L. HOM05D005805 ORTHO05D007226 2.2e-151 539.3 351 79.2
Glyma.01G215800 Glycine max HOM05D005805 ORTHO05D007226 2.5e-147 525.8 359 77.2
Phvul.002G153800 Phaseolus vulgaris HOM05D005805 ORTHO05D007226 5.1e-140 501.5 316 81.6
Lj2g0007037 Lotus japonicus HOM05D005805 ORTHO05D007226 9.6e-139 497.3 475 58.7
arahy.Tifrunner.gnm1.ann1.8FZ8QS Arachis hypogaea HOM05D005805 ORTHO05D007226 9.9e-136 487.3 413 65.1
Medtr5g010950 Medicago truncatula HOM05D005805 ORTHO05D007226 2.9e-135 485.7 358 72.6
Psat2g181520 Pisum sativum HOM05D005805 ORTHO05D007226 5.4e-134 481.5 438 62.8
TPR.G6662 Trifolium pratense HOM05D005805 ORTHO05D007226 5.6e-131 471.5 443 61.2
CSS0001301 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 9.3e-118 427.6 346 66.2
TAR629G3121 Trochodendron aralioides HOM05D005805 ORTHO05D007226 2.5e-115 419.5 346 64.5
Dinv39015 Davidia involucrata HOM05D005805 ORTHO05D007226 3.3e-115 419.1 315 68.6
Actinidia02051 Actinidia chinensis HOM05D005805 ORTHO05D007226 5.7e-115 418.3 342 64.3
TAR375G0540 Trochodendron aralioides HOM05D005805 ORTHO05D007226 1.1e-113 414.1 346 62.4
GSVIVG01019866001 Vitis vinifera HOM05D005805 ORTHO05D007226 2.4e-113 412.9 347 62.2
Actinidia14511 Actinidia chinensis HOM05D005805 ORTHO05D007226 4.1e-113 412.1 345 63.5
CSS0012055 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 1.2e-112 410.6 344 64.8
Eucgr.D01927 Eucalyptus grandis HOM05D005805 ORTHO05D007226 1.2e-112 410.6 392 58.2
CiPaw.11G141700 Carya illinoinensis HOM05D005805 ORTHO05D007226 7.7e-112 407.9 451 54.8
Sed0020250 Sechium edule HOM05D005805 ORTHO05D007226 1.7e-111 406.8 351 62.1
arahy.Tifrunner.gnm1.ann1.J6ALFQ Arachis hypogaea HOM05D005805 ORTHO05D007226 3.8e-111 405.6 488 51.4
Hma1.2p1_0371F.1_g138200 Hydrangea macrophylla HOM05D005805 ORTHO05D007226 2.5e-110 402.9 339 64.0
CAN.G981.40 Capsicum annuum HOM05D005805 ORTHO05D007226 2.3e-108 396.4 354 61.0
vmacro00648 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 2.0e-107 393.3 328 63.7
Potri.001G111100 Populus trichocarpa HOM05D005805 ORTHO05D007226 6.3e-106 388.3 472 50.4
Sopen08g028610 Solanum pennellii HOM05D005805 ORTHO05D007226 3.1e-105 386.0 353 60.6
QL12p017075 Quercus lobata HOM05D005805 ORTHO05D007226 1.2e-104 384.0 453 51.9
Nn1g01331 Nelumbo nucifera HOM05D005805 ORTHO05D007226 1.5e-104 383.6 346 61.0
MELO3C005626.2 Cucumis melo HOM05D005805 ORTHO05D007226 5.9e-104 381.7 331 61.6
Nitab4.5_0009882g0030 Nicotiana tabacum HOM05D005805 ORTHO05D007226 1.7e-103 380.2 375 55.5
Lsat_1_v5_gn_6_12941 Lactuca sativa HOM05D005805 ORTHO05D007226 3.8e-103 379.0 346 58.1
Potri.003G120900 Populus trichocarpa HOM05D005805 ORTHO05D007226 1.1e-102 377.5 483 48.4
Cfa012095 Carpinus fangiana HOM05D005805 ORTHO05D007226 1.9e-102 376.7 482 48.1
Duzib068G1011 Durio zibethinus HOM05D005805 ORTHO05D007226 2.5e-102 376.3 344 58.7
PGSC0003DMG400022755 Solanum tuberosum HOM05D005805 ORTHO05D007226 7.2e-102 374.8 323 61.9
HanXRQChr02g0048701 Helianthus annuus HOM05D005805 ORTHO05D007226 9.4e-102 374.4 350 59.4
Ciclev10020090m.g Citrus clementina HOM05D005805 ORTHO05D007226 4.7e-101 372.1 461 48.8
Nitab4.5_0001714g0200 Nicotiana tabacum HOM05D005805 ORTHO05D007226 4.7e-101 372.1 343 58.3
Thecc.03G270600 Theobroma cacao HOM05D005805 ORTHO05D007226 6.1e-101 371.7 432 49.8
Gorai.003G162800 Gossypium raimondii HOM05D005805 ORTHO05D007226 2.0e-99 366.7 452 48.5
Migut.A00918 Erythranthe guttata HOM05D005805 ORTHO05D007226 2.6e-99 366.3 389 53.5
Prupe.5G089600 Prunus persica HOM05D005805 ORTHO05D007226 3.3e-99 365.9 516 45.7
CiPaw.12G099000 Carya illinoinensis HOM05D005805 ORTHO05D007226 5.7e-99 365.2 459 48.8
Duzib084G0260 Durio zibethinus HOM05D005805 ORTHO05D007226 7.4e-99 364.8 440 49.1
Gohir.D03G155100 Gossypium hirsutum HOM05D005805 ORTHO05D007226 7.4e-99 364.8 452 48.2
ClCG01G003160 Citrullus lanatus HOM05D005805 ORTHO05D007226 1.7e-98 363.6 393 52.9
Peaxi162Scf00620g00920 Petunia axillaris HOM05D005805 ORTHO05D007226 2.2e-98 363.2 377 53.3
MD04G1068600 Malus domestica HOM05D005805 ORTHO05D007226 3.1e-97 359.4 502 44.8
Gohir.A03G015238 Gossypium hirsutum HOM05D005805 ORTHO05D007226 4.5e-96 355.5 443 47.4
MD06G1071900 Malus domestica HOM05D005805 ORTHO05D007226 4.5e-96 355.5 501 44.3
PGR031G2899 Punica granatum HOM05D005805 ORTHO05D007226 5.9e-96 355.1 434 49.8
Sabra01G0084700 Salix brachista HOM05D005805 ORTHO05D007226 2.2e-95 353.2 498 45.6
Solyc08g080260.4 Solanum lycopersicum HOM05D005805 ORTHO05D007226 2.9e-95 352.8 360 56.1
Aqoxy7G00467 Aquilegia oxysepala HOM05D005805 ORTHO05D007226 3.8e-95 352.4 302 61.6
Oeu031590.1 Olea europaea HOM05D005805 ORTHO05D007226 3.8e-95 352.4 373 54.7
Cc08_g13930 Coffea canephora HOM05D005805 ORTHO05D007226 5.0e-95 352.1 351 55.8
Gorai.004G207600 Gossypium raimondii HOM05D005805 ORTHO05D007226 1.1e-94 350.9 397 50.1
Lj2A197T60 Lonicera japonica HOM05D005805 ORTHO05D007226 1.5e-94 350.5 346 56.6
Duzib205G1286 Durio zibethinus HOM05D005805 ORTHO05D007226 1.9e-94 350.1 434 47.9
TWI81G0996 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 7.2e-94 348.2 470 46.4
FAN04G0223 Fragaria x ananassa HOM05D005805 ORTHO05D007226 2.7e-93 346.3 492 43.9
FvH4_5g01420 Fragaria vesca HOM05D005805 ORTHO05D007226 1.0e-92 344.4 491 43.6
FAN13G0947 Fragaria x ananassa HOM05D005805 ORTHO05D007226 1.0e-92 344.4 483 43.9
FAN18G3929 Fragaria x ananassa HOM05D005805 ORTHO05D007226 2.3e-92 343.2 491 43.6
FAN08G1094 Fragaria x ananassa HOM05D005805 ORTHO05D007226 4.0e-92 342.4 501 42.9
Gohir.A08G178400 Gossypium hirsutum HOM05D005805 ORTHO05D007226 1.3e-90 337.4 472 44.5
CsaV3_5G003280 Cucumis sativus L. HOM05D005805 ORTHO05D007226 2.2e-90 336.7 279 62.4
RcHm_v2.0_Chr7g0199441 Rosa chinensis HOM05D005805 ORTHO05D007226 6.3e-90 335.1 511 42.3
CANSAT21G1670 Cannabis sativa HOM05D005805 ORTHO05D007226 8.2e-90 334.7 523 42.4
THA.LOC104814292 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 2.4e-89 333.2 414 48.8
MBI04_g40844_MAGBIO Magnolia biondii HOM05D005805 ORTHO05D007226 7.0e-89 331.6 350 52.3
Manes.01G068001 Manihot esculenta HOM05D005805 ORTHO05D007226 2.7e-88 329.7 424 46.9
TWI60G0251 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 1.3e-87 327.4 478 43.7
HanXRQChr07g0188541 Helianthus annuus HOM05D005805 ORTHO05D007226 1.7e-87 327.0 330 56.1
ECA233G3280 Erigeron canadensis HOM05D005805 ORTHO05D007226 1.1e-86 324.3 432 44.9
THA.LOC104806368 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 2.1e-85 320.1 424 47.4
Thhalv10028709m.g Eutrema salsugineum HOM05D005805 ORTHO05D007226 2.7e-85 319.7 408 48.3
Haze_08957 Corylus avellana HOM05D005805 ORTHO05D007226 1.4e-84 317.4 496 43.8
A02p25990 Brassica napus HOM05D005805 ORTHO05D007226 4.0e-84 315.8 377 49.3
BraA02t07597Z Brassica rapa HOM05D005805 ORTHO05D007226 4.0e-84 315.8 377 49.3
Sed0020925 Sechium edule HOM05D005805 ORTHO05D007226 2.0e-83 313.5 280 59.3
Dinv37696 Davidia involucrata HOM05D005805 ORTHO05D007226 1.3e-82 310.8 279 60.6
BolC9t56310H Brassica oleracea HOM05D005805 ORTHO05D007226 1.7e-82 310.5 409 47.4
BraA09t38298Z Brassica rapa HOM05D005805 ORTHO05D007226 1.4e-81 307.4 409 46.9
Oeu001898.3 Olea europaea HOM05D005805 ORTHO05D007226 3.1e-81 306.2 359 52.4
Sc01g0008800 Simmondsia chinensis HOM05D005805 ORTHO05D007226 3.1e-81 306.2 450 41.8
Aa31LG9G10640 Aethionema arabicum HOM05D005805 ORTHO05D007226 7.0e-81 305.1 408 46.1
Rhsim08G0109800 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.6e-80 303.9 322 54.3
C09p34650 Brassica napus HOM05D005805 ORTHO05D007226 2.0e-80 303.5 430 45.3
ATR0757G009 Amborella trichopoda HOM05D005805 ORTHO05D007226 1.7e-79 300.4 305 53.4
A09p27320 Brassica napus HOM05D005805 ORTHO05D007226 2.2e-79 300.1 430 45.1
BcaB05g23807 Brassica carinata HOM05D005805 ORTHO05D007226 3.2e-78 296.2 400 46.2
AL6G46500 Arabidopsis lyrata HOM05D005805 ORTHO05D007226 1.3e-74 284.3 439 43.7
Sp6g05660 Schrenkiella parvula HOM05D005805 ORTHO05D007226 1.7e-74 283.9 400 45.2
EL10Ac5g12722 Beta vulgaris HOM05D005805 ORTHO05D007226 3.1e-73 279.6 452 41.2
unitig_8.g3899 Utricularia gibba HOM05D005805 ORTHO05D007226 4.1e-73 279.3 355 48.7
CARHR254520 Cardamine hirsuta HOM05D005805 ORTHO05D007226 1.2e-72 277.7 410 44.6
HPP92_020989 Vanilla planifolia HOM05D005805 ORTHO05D007226 1.2e-72 277.7 429 41.3
Carub.0006s3090 Capsella rubella HOM05D005805 ORTHO05D007226 4.5e-72 275.8 447 40.9
AUR62017300 Chenopodium quinoa HOM05D005805 ORTHO05D007226 5.6e-70 268.9 451 40.4
AUR62010661 Chenopodium quinoa HOM05D005805 ORTHO05D007226 9.5e-70 268.1 451 39.9
Hund28361 Selenicereus undatus HOM05D005805 ORTHO05D007226 3.6e-69 266.2 493 37.3
Hund28365 Selenicereus undatus HOM05D005805 ORTHO05D007226 3.6e-69 266.2 493 37.3
Os03g0667700 Oryza sativa ssp. japonica HOM05D005805 ORTHO05D007226 8.0e-69 265.0 379 44.1
Ah.12g057730 Amaranthus hybridus HOM05D005805 ORTHO05D007226 3.0e-68 263.1 480 38.8
AT4G11790 Arabidopsis thaliana HOM05D005805 ORTHO05D007226 6.8e-68 261.9 457 40.0
Manes.02G028100 Manihot esculenta HOM05D005805 ORTHO05D007226 1.2e-67 261.2 371 45.6
PSO478G0076 Papaver somniferum HOM05D005805 ORTHO05D007226 1.5e-67 260.8 576 34.0
CDE11G0359 Ceratophyllum demersum HOM05D005805 ORTHO05D007226 1.3e-66 257.7 487 34.1
Zm00001eb073520 Zea mays HOM05D005805 ORTHO05D007226 2.9e-66 256.5 445 38.4
BcaC03g16328 Brassica carinata HOM05D005805 ORTHO05D007226 8.3e-66 255.0 310 49.0
PSO782G3262 Papaver somniferum HOM05D005805 ORTHO05D007226 2.4e-65 253.4 582 33.7
SalBow6G0943 Salvia bowleyana HOM05D005805 ORTHO05D007226 4.4e-59 232.6 379 41.2
BcaB01g01678 Brassica carinata HOM05D005805 ORTHO05D007226 7.0e-57 225.3 359 42.9
C02p41470 Brassica napus HOM05D005805 ORTHO05D007226 9.2e-57 224.9 314 44.9
COL.COLO4_05276 Corchorus olitorius HOM05D005805 ORTHO05D007226 3.0e-55 219.9 141 77.3
Gohir.D08G196900 Gossypium hirsutum HOM05D005805 ORTHO05D007226 3.6e-53 213.0 141 75.9
TAR374G1484 Trochodendron aralioides HOM05D005805 ORTHO05D007226 2.0e-51 207.2 149 70.5
vmacro10803 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 5.8e-51 205.7 309 46.0
Cpa.g.sc29.9 Carica papaya HOM05D005805 ORTHO05D007226 1.9e-46 190.7 360 40.0
Atru.chr9.1535 Acer truncatum HOM05D005805 ORTHO05D007226 2.5e-46 190.3 217 53.0
Ah.02g116420 Amaranthus hybridus HOM05D005805 ORTHO05D007226 9.2e-41 171.8 446 32.3
BolC2t10164H Brassica oleracea HOM05D005805 ORTHO05D007226 4.2e-33 146.4 112 67.0
AagrBONN_evm.TU.Sc2ySwM_344.4489 Anthoceros agrestis HOM05D005805 ORTHO05D007226 6.9e-28 129.0 348 29.9
DCAR_006764 Daucus carota HOM05D005805 ORTHO05D007226 6.4e-26 122.5 210 42.4
COL.COLO4_05274 Corchorus olitorius HOM05D005805 ORTHO05D007226 1.7e-23 114.4 72 73.6
Hma1.2p1_0002F.1_g002590 Hydrangea macrophylla HOM05D005805 ORTHO05D007226 2.5e-22 110.5 74 68.9
CBR_g49019 Chara braunii HOM05D005805 ORTHO05D007226 1.5e-14 84.7 74 50.0
SGA_v2.0_scaffold60G20821 Striga asiatica HOM05D011763 ORTHO05D014257 1.5e-14 84.7 322 26.4
SGA_v2.0_scaffold60G21020 Striga asiatica HOM05D011763 ORTHO05D014257 1.5e-14 84.7 85 50.6
MCO13G284 Micromonas commoda HOM05D005805 ORTHO05D007226 7.4e-06 55.8 279 24.7


User provided reference genes

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