Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0379871 Lupinus albus HOM05D005851 ORTHO05D007137 1.1e-87 326.6 175 100.0
arahy.Tifrunner.gnm1.ann1.BUTP6K Arachis hypogaea HOM05D005851 ORTHO05D007137 6.5e-59 231.1 186 67.7
arahy.Tifrunner.gnm1.ann1.KEJN3W Arachis hypogaea HOM05D005851 ORTHO05D007137 4.2e-58 228.4 186 67.2
Phvul.002G151800 Phaseolus vulgaris HOM05D005851 ORTHO05D007137 2.0e-55 219.5 172 65.1
Glyma.01G213300 Glycine max HOM05D005851 ORTHO05D007137 4.1e-53 211.8 173 63.6
Lj2g0003035 Lotus japonicus HOM05D005851 ORTHO05D007137 9.1e-53 210.7 167 65.9
TPR.G19565 Trifolium pratense HOM05D005851 ORTHO05D007137 9.4e-50 200.7 182 62.1
MD06G1068000 Malus domestica HOM05D005851 ORTHO05D007137 3.6e-49 198.7 139 71.2
Medtr5g011460 Medicago truncatula HOM05D005851 ORTHO05D007137 4.7e-49 198.4 177 61.6
Psat2g180400 Pisum sativum HOM05D005851 ORTHO05D007137 8.0e-49 197.6 179 61.5
SGA_v2.0_scaffold144G35989 Striga asiatica HOM05D005851 ORTHO05D007137 8.8e-48 194.1 129 74.4
FAN13G0774 Fragaria x ananassa HOM05D005851 ORTHO05D007137 7.5e-47 191.0 137 67.2
FvH4_5g00940 Fragaria vesca HOM05D005851 ORTHO05D007137 1.7e-46 189.9 137 66.4
Oeu064711.1 Olea europaea HOM05D005851 ORTHO05D007137 1.7e-46 189.9 136 69.1
Hma1.2p1_0367F.1_g137205 Hydrangea macrophylla HOM05D005851 ORTHO05D007137 2.8e-46 189.1 101 88.1
FAN04G1422 Fragaria x ananassa HOM05D005851 ORTHO05D007137 3.7e-46 188.7 137 65.7
QL12p015621 Quercus lobata HOM05D005851 ORTHO05D007137 3.7e-46 188.7 96 90.6
RcHm_v2.0_Chr7g0200451 Rosa chinensis HOM05D005851 ORTHO05D007137 1.8e-45 186.4 178 55.6
CSS0019536 Camellia sinensis var. sinensis HOM05D005851 ORTHO05D007137 2.4e-45 186.0 96 87.5
Rhsim05G0172500 Rhododendron simsii HOM05D005851 ORTHO05D007137 3.1e-45 185.7 96 87.5
Actinidia14484 Actinidia chinensis HOM05D005851 ORTHO05D007137 4.1e-45 185.3 156 62.2
MSTRG.1924 Avicennia marina HOM05D005851 ORTHO05D007137 4.1e-45 185.3 171 57.3
HanXRQChr09g0246661 Helianthus annuus HOM05D005851 ORTHO05D007137 5.4e-45 184.9 96 87.5
Peaxi162Scf00620g00019 Petunia axillaris HOM05D005851 ORTHO05D007137 5.4e-45 184.9 101 85.1
SalBow1G3546 Salvia bowleyana HOM05D005851 ORTHO05D007137 5.4e-45 184.9 170 58.8
TAR629G1703 Trochodendron aralioides HOM05D005851 ORTHO05D007137 5.4e-45 184.9 95 88.4
TWI60G0484 Tripterygium wilfordii HOM05D005851 ORTHO05D007137 7.0e-45 184.5 137 67.9
MBI12_g34479_MAGBIO Magnolia biondii HOM05D005851 ORTHO05D007137 9.1e-45 184.1 95 87.4
Ciclev10024430m.g Citrus clementina HOM05D005851 ORTHO05D007137 1.2e-44 183.7 126 75.4
vmacro00216 Vaccinium macrocarpon HOM05D005851 ORTHO05D007137 2.0e-44 183.0 96 87.5
GSVIVG01019923001 Vitis vinifera HOM05D005851 ORTHO05D007137 2.0e-44 183.0 150 63.3
CsaV3_3G003320 Cucumis sativus L. HOM05D005851 ORTHO05D007137 2.7e-44 182.6 101 87.1
ECA233G5981 Erigeron canadensis HOM05D005851 ORTHO05D007137 2.7e-44 182.6 94 86.2
Cpa.g.sc29.62 Carica papaya HOM05D005851 ORTHO05D007137 3.5e-44 182.2 96 87.5
CAN.G630.46 Capsicum annuum HOM05D005851 ORTHO05D007137 4.5e-44 181.8 128 69.5
Nitab4.5_0000439g0090 Nicotiana tabacum HOM05D005851 ORTHO05D007137 4.5e-44 181.8 100 82.0
Potri.001G114800 Populus trichocarpa HOM05D005851 ORTHO05D007137 5.9e-44 181.4 129 69.8
Nitab4.5_0006122g0020 Nicotiana tabacum HOM05D005851 ORTHO05D007137 1.0e-43 180.6 97 83.5
Sabra01G0087800 Salix brachista HOM05D005851 ORTHO05D007137 1.0e-43 180.6 127 69.3
Atru.chr9.1473 Acer truncatum HOM05D005851 ORTHO05D007137 1.3e-43 180.3 101 84.2
Sc01g0009080 Simmondsia chinensis HOM05D005851 ORTHO05D007137 1.7e-43 179.9 98 85.7
PGSC0003DMG400012515 Solanum tuberosum HOM05D005851 ORTHO05D007137 1.7e-43 179.9 98 82.7
Glyma.11G028600 Glycine max HOM05D005851 ORTHO05D007137 2.3e-43 179.5 155 61.9
Solyc08g079680.3 Solanum lycopersicum HOM05D005851 ORTHO05D007137 2.3e-43 179.5 94 85.1
Sopen08g028040 Solanum pennellii HOM05D005851 ORTHO05D007137 2.3e-43 179.5 94 85.1
Duzib205G1229 Durio zibethinus HOM05D005851 ORTHO05D007137 2.9e-43 179.1 135 65.9
HPP92_025677 Vanilla planifolia HOM05D005851 ORTHO05D007137 2.9e-43 179.1 98 82.7
CiPaw.11G145200 Carya illinoinensis HOM05D005851 ORTHO05D007137 3.8e-43 178.7 97 85.6
AUR62010535 Chenopodium quinoa HOM05D005851 ORTHO05D007137 3.8e-43 178.7 100 82.0
PGSC0003DMG400003949 Solanum tuberosum HOM05D005851 ORTHO05D007137 3.8e-43 178.7 134 64.9
CDE04G1030 Ceratophyllum demersum HOM05D005851 ORTHO05D007137 5.0e-43 178.3 98 84.7
EL10Ac5g12653 Beta vulgaris HOM05D005851 ORTHO05D007137 8.6e-43 177.6 98 79.6
Solyc08g007580.4 Solanum lycopersicum HOM05D005851 ORTHO05D007137 8.6e-43 177.6 128 66.4
Cc08_g13500 Coffea canephora HOM05D005851 ORTHO05D007137 1.1e-42 177.2 101 85.1
PGR042G2385 Punica granatum HOM05D005851 ORTHO05D007137 1.5e-42 176.8 101 82.2
ATR0810G218 Amborella trichopoda HOM05D005851 ORTHO05D007137 1.9e-42 176.4 95 83.2
Gohir.A12G222500 Gossypium hirsutum HOM05D005851 ORTHO05D007137 1.9e-42 176.4 94 85.1
Gohir.D12G225000 Gossypium hirsutum HOM05D005851 ORTHO05D007137 1.9e-42 176.4 94 85.1
Gorai.008G241100 Gossypium raimondii HOM05D005851 ORTHO05D007137 1.9e-42 176.4 94 85.1
Sopen08g003540 Solanum pennellii HOM05D005851 ORTHO05D007137 2.5e-42 176.0 94 83.0
CAN.G1394.24 Capsicum annuum HOM05D005851 ORTHO05D007137 4.2e-42 175.3 94 84.0
MELO3C013999.2 Cucumis melo HOM05D005851 ORTHO05D007137 4.2e-42 175.3 109 80.7
THA.LOC104814025 Tarenaya hassleriana HOM05D005851 ORTHO05D007137 5.6e-42 174.9 93 86.0
AUR62017360 Chenopodium quinoa HOM05D005851 ORTHO05D007137 7.2e-42 174.5 100 80.0
Zm00001eb103020 Zea mays HOM05D005851 ORTHO05D007137 7.2e-42 174.5 98 82.7
CARHR229860 Cardamine hirsuta HOM05D005851 ORTHO05D007137 9.5e-42 174.1 93 84.9
Nitab4.5_0001816g0070 Nicotiana tabacum HOM05D005851 ORTHO05D007137 9.5e-42 174.1 94 84.0
BcaC09g51070 Brassica carinata HOM05D005851 ORTHO05D007137 2.1e-41 172.9 93 83.9
BcaC09g51071 Brassica carinata HOM05D005851 ORTHO05D007137 2.1e-41 172.9 93 83.9
BcaNung01022 Brassica carinata HOM05D005851 ORTHO05D007137 2.1e-41 172.9 93 83.9
A01p14080 Brassica napus HOM05D005851 ORTHO05D007137 2.1e-41 172.9 93 83.9
C01p17300 Brassica napus HOM05D005851 ORTHO05D007137 2.1e-41 172.9 93 83.9
BolC1t01669H Brassica oleracea HOM05D005851 ORTHO05D007137 2.1e-41 172.9 93 83.9
BraA01t01356Z Brassica rapa HOM05D005851 ORTHO05D007137 2.1e-41 172.9 93 83.9
Aa31LG6G4910 Aethionema arabicum HOM05D000943 ORTHO05D002475 2.8e-41 172.6 94 84.0
Nitab4.5_0001265g0130 Nicotiana tabacum HOM05D005851 ORTHO05D007137 2.8e-41 172.6 94 83.0
AT4G22830 Arabidopsis thaliana HOM05D005851 ORTHO05D007137 6.1e-41 171.4 93 83.9
Carub.0007s1844 Capsella rubella HOM05D005851 ORTHO05D007137 6.1e-41 171.4 93 83.9
Thhalv10026321m.g Eutrema salsugineum HOM05D005851 ORTHO05D007137 6.1e-41 171.4 93 83.9
Os04g0379400 Oryza sativa ssp. japonica HOM05D005851 ORTHO05D007137 6.1e-41 171.4 96 80.2
AL7G30690 Arabidopsis lyrata HOM05D005851 ORTHO05D007137 8.0e-41 171.0 93 82.8
VMungo1215G2211 Vigna mungo HOM05D005851 ORTHO05D007137 8.9e-40 167.5 143 58.7
FAN08G3582 Fragaria x ananassa HOM05D005851 ORTHO05D007137 1.4e-37 160.2 139 59.0
SMO364G0744 Selaginella moellendorffii HOM05D005851 ORTHO05D007137 1.4e-37 160.2 98 71.4
Pp3c10_11850 Physcomitrium patens HOM05D005851 ORTHO05D007137 2.7e-36 156.0 94 73.4
Pp3c12_9510 Physcomitrium patens HOM05D005851 ORTHO05D007137 4.6e-36 155.2 94 73.4
Mapoly0066s0013 Marchantia polymorpha HOM05D005851 ORTHO05D007137 3.9e-35 152.1 94 70.2
Ah.02g116130 Amaranthus hybridus HOM05D005851 ORTHO05D007137 2.5e-34 149.4 77 85.7
COL.COLO4_23838 Corchorus olitorius HOM05D005851 ORTHO05D007137 3.3e-34 149.1 75 90.7
Sed0022049 Sechium edule HOM05D005851 ORTHO05D007137 3.1e-32 142.5 130 56.2
CANSAT95G0001 Cannabis sativa HOM05D005851 ORTHO05D007137 5.2e-32 141.7 131 58.8
Migut.E01010 Erythranthe guttata HOM05D005851 ORTHO05D007137 8.9e-32 141.0 98 68.4
Cre12.g555400 Chlamydomonas reinhardtii HOM05D005851 ORTHO05D007137 1.5e-31 140.2 98 62.2
DCAR_000876 Daucus carota HOM05D005851 ORTHO05D007137 3.4e-31 139.0 68 86.8
Manes.02G031801 Manihot esculenta HOM05D005851 ORTHO05D007137 3.4e-31 139.0 149 52.3
SEGI_29987 Sequoiadendron giganteum HOM05D005851 ORTHO05D007137 8.3e-30 134.4 67 83.6
FAN18G0436 Fragaria x ananassa HOM05D005851 ORTHO05D007137 8.6e-27 124.4 137 49.6
MCO03G553 Micromonas commoda HOM05D005851 ORTHO05D007137 1.6e-25 120.2 98 56.1
Nn1g01189 Nelumbo nucifera HOM05D005851 ORTHO05D007137 1.6e-25 120.2 101 64.4
MD04G1076900 Malus domestica HOM05D005851 ORTHO05D007137 2.3e-24 116.3 60 93.3
PRCOL_00005435 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 1.5e-23 113.6 94 54.3
PRCOL_00002729 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 2.6e-23 112.8 89 55.1
MCO14G294 Micromonas commoda HOM05D005851 ORTHO05D007137 5.8e-23 111.7 93 52.7
Lj2A204T50 Lonicera japonica HOM05D005851 ORTHO05D007137 7.1e-21 104.8 49 89.8
MCO14G091 Micromonas commoda HOM05D005851 ORTHO05D007137 7.1e-21 104.8 97 48.5
Dinv39057 Davidia involucrata HOM05D005851 ORTHO05D007137 2.1e-20 103.2 55 85.5
Nn4g26436 Nelumbo nucifera HOM05D005851 ORTHO05D007137 9.5e-18 94.4 53 79.2
Thecc.03G264400 Theobroma cacao HOM05D005851 ORTHO05D007137 2.1e-17 93.2 93 48.4
Ca_06681_v3 Cicer arietinum L. HOM05D000943 ORTHO05D002475 3.6e-17 92.4 82 54.9
Lsat_1_v5_gn_6_10241 Lactuca sativa HOM05D005851 ORTHO05D007137 4.0e-16 89.0 52 76.9
unitig_699.g19746 Utricularia gibba HOM05D002021 ORTHO05D002077 1.2e-15 87.4 75 56.0
arahy.Tifrunner.gnm1.ann1.UAJL6I Arachis hypogaea HOM05D005851 ORTHO05D007137 1.5e-15 87.0 115 45.2
Eucgr.E00492 Eucalyptus grandis HOM05D005851 ORTHO05D007137 3.4e-15 85.9 43 86.0
ClCG00G000050 Citrullus lanatus HOM05D005851 ORTHO05D007137 9.9e-15 84.3 42 85.7
ClCG00G004660 Citrullus lanatus HOM05D005851 ORTHO05D007137 9.9e-15 84.3 42 85.7
ClCG00G005270 Citrullus lanatus HOM05D005851 ORTHO05D007137 9.9e-15 84.3 42 85.7
ClCG10G003300 Citrullus lanatus HOM05D005851 ORTHO05D007137 9.9e-15 84.3 42 85.7
Hund14676 Selenicereus undatus HOM05D005851 ORTHO05D007137 1.3e-14 84.0 43 83.7
CBR_g50783 Chara braunii HOM05D000019 ORTHO05D000002 3.7e-14 82.4 51 68.6
PSO782G0540 Papaver somniferum HOM05D005851 ORTHO05D007137 3.7e-14 82.4 46 76.1
PRCOL_00002728 Prasinoderma coloniale HOM05D005851 ORTHO05D049091 2.4e-13 79.7 96 43.8
BolC3t15330H Brassica oleracea HOM05D005851 ORTHO05D007137 2.8e-09 66.2 39 74.4
arahy.Tifrunner.gnm1.ann1.54ECHP Arachis hypogaea HOM05D005851 ORTHO05D007137 3.1e-08 62.8 41 85.4
arahy.Tifrunner.gnm1.ann1.CS7A8V Arachis hypogaea HOM05D005851 ORTHO05D007137 3.1e-08 62.8 41 85.4
arahy.Tifrunner.gnm1.ann1.IPBJ4Y Arachis hypogaea HOM05D005851 ORTHO05D007137 3.1e-08 62.8 41 85.4
arahy.Tifrunner.gnm1.ann1.Q2BFW3 Arachis hypogaea HOM05D005851 ORTHO05D007137 3.1e-08 62.8 41 85.4
arahy.Tifrunner.gnm1.ann1.6D2PAS Arachis hypogaea HOM05D005851 ORTHO05D007137 1.5e-07 60.5 41 82.9
Aa31LG6G4700 Aethionema arabicum HOM05D000943 ORTHO05D002475 2.6e-07 59.7 40 75.0


User provided reference genes

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