Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0379391 Lupinus albus HOM05D006859 ORTHO05D007990 1.3e-142 510.0 302 100.0
TPR.G31422 Trifolium pratense HOM05D006859 ORTHO05D007990 4.7e-97 358.6 296 71.3
Medtr5g013280 Medicago truncatula HOM05D006859 ORTHO05D007990 2.8e-94 349.4 301 69.8
Lj2g0014108 Lotus japonicus HOM05D006859 ORTHO05D007990 2.4e-93 346.3 314 66.6
Phvul.002G001000 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 3.2e-90 335.9 296 67.6
VMungo1215G2710 Vigna mungo HOM05D006859 ORTHO05D007990 6.1e-89 331.6 301 67.1
Glyma.01G205600 Glycine max HOM05D006859 ORTHO05D007990 8.3e-86 321.2 304 65.5
Prupe.5G059200 Prunus persica HOM05D006859 ORTHO05D007990 8.3e-86 321.2 299 63.9
QL12p009356 Quercus lobata HOM05D006859 ORTHO05D007990 2.0e-84 316.6 298 63.1
Psat2g176200 Pisum sativum HOM05D006859 ORTHO05D007990 1.0e-83 314.3 277 68.2
Dinv28858 Davidia involucrata HOM05D006859 ORTHO05D007990 6.1e-81 305.1 300 61.7
FvH4_5g20140 Fragaria vesca HOM05D006859 ORTHO05D007990 2.0e-79 300.1 301 58.1
FAN08G0582 Fragaria x ananassa HOM05D006859 ORTHO05D007990 4.4e-79 298.9 302 58.6
CSS0046225 Camellia sinensis var. sinensis HOM05D006859 ORTHO05D007990 2.9e-78 296.2 301 61.8
RcHm_v2.0_Chr7g0205091 Rosa chinensis HOM05D006859 ORTHO05D007990 1.4e-77 293.9 304 58.9
FAN18G2706 Fragaria x ananassa HOM05D006859 ORTHO05D007990 2.4e-77 293.1 302 57.6
CANSAT21G2559 Cannabis sativa HOM05D006859 ORTHO05D007990 1.0e-75 287.7 299 57.9
MD00G1165000 Malus domestica HOM05D006859 ORTHO05D007990 2.3e-75 286.6 304 59.9
Eucgr.D02124 Eucalyptus grandis HOM05D006859 ORTHO05D007990 1.1e-74 284.3 301 57.1
arahy.Tifrunner.gnm1.ann1.B2NILF Arachis hypogaea HOM05D006859 ORTHO05D007990 1.5e-74 283.9 316 58.2
arahy.Tifrunner.gnm1.ann1.WYE05V Arachis hypogaea HOM05D006859 ORTHO05D007990 1.5e-74 283.9 316 58.2
PGR031G1874 Punica granatum HOM05D006859 ORTHO05D007990 2.5e-74 283.1 306 56.2
Actinidia25901 Actinidia chinensis HOM05D006859 ORTHO05D007990 4.3e-74 282.3 294 62.2
Sabra03G0053000 Salix brachista HOM05D006859 ORTHO05D007990 4.7e-73 278.9 299 58.2
vmacro00041 Vaccinium macrocarpon HOM05D006859 ORTHO05D007990 1.8e-72 276.9 299 60.2
MD04G1050900 Malus domestica HOM05D006859 ORTHO05D007990 5.2e-72 275.4 291 60.1
CiPaw.11G069300 Carya illinoinensis HOM05D006859 ORTHO05D007990 6.8e-72 275.0 257 61.9
TAR636G0545 Trochodendron aralioides HOM05D006859 ORTHO05D007990 1.2e-71 274.2 295 59.0
Duzib068G0861 Durio zibethinus HOM05D006859 ORTHO05D007990 1.5e-71 273.9 297 56.6
Hund11327 Selenicereus undatus HOM05D006859 ORTHO05D007990 2.0e-71 273.5 296 55.7
Gorai.004G193900 Gossypium raimondii HOM05D006859 ORTHO05D007990 3.4e-71 272.7 302 57.0
Duzib205G1414 Durio zibethinus HOM05D006859 ORTHO05D007990 7.5e-71 271.6 304 55.6
Potri.003G082200 Populus trichocarpa HOM05D006859 ORTHO05D007990 7.5e-71 271.6 299 56.2
FAN04G1798 Fragaria x ananassa HOM05D006859 ORTHO05D007990 9.8e-71 271.2 301 54.8
TWI15G0070 Tripterygium wilfordii HOM05D006859 ORTHO05D007990 2.9e-70 269.6 294 57.1
Atru.chr9.1231 Acer truncatum HOM05D006859 ORTHO05D007990 4.9e-70 268.9 302 57.3
Gohir.D08G184600 Gossypium hirsutum HOM05D006859 ORTHO05D007990 4.9e-70 268.9 302 56.3
Cc08_g11510 Coffea canephora HOM05D006859 ORTHO05D007990 1.4e-69 267.3 303 57.8
Gohir.A08G165800 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.4e-69 267.3 302 55.6
Aqoxy7G00861 Aquilegia oxysepala HOM05D006859 ORTHO05D007990 2.4e-69 266.5 295 56.3
MELO3C003330.2 Cucumis melo HOM05D006859 ORTHO05D007990 2.7e-68 263.1 301 53.8
RhsimUnG0092900 Rhododendron simsii HOM05D006859 ORTHO05D007990 3.5e-68 262.7 295 58.6
Oeu017213.1 Olea europaea HOM05D006859 ORTHO05D007990 1.3e-67 260.8 300 54.7
EL10Ac5g12291 Beta vulgaris HOM05D006859 ORTHO05D007990 8.6e-67 258.1 299 55.5
Cpa.g.sc89.10 Carica papaya HOM05D006859 ORTHO05D007990 5.6e-66 255.4 296 56.1
PSO717G0098 Papaver somniferum HOM05D006859 ORTHO05D007990 9.5e-66 254.6 304 52.3
Cfa012667 Carpinus fangiana HOM05D006859 ORTHO05D007990 1.2e-65 254.2 261 61.7
Ciclev10021440m.g Citrus clementina HOM05D006859 ORTHO05D007990 1.1e-64 251.1 299 53.2
PSO675G5712 Papaver somniferum HOM05D006859 ORTHO05D007990 4.0e-64 249.2 304 52.0
Migut.A01048 Erythranthe guttata HOM05D006859 ORTHO05D007990 2.6e-63 246.5 304 53.6
Manes.01G086700 Manihot esculenta HOM05D006859 ORTHO05D007990 2.6e-63 246.5 297 55.6
Nn1g00823 Nelumbo nucifera HOM05D006859 ORTHO05D007990 1.3e-62 244.2 296 55.1
Ca_24604_v3 Cicer arietinum L. HOM05D006859 ORTHO05D007990 3.2e-61 239.6 310 50.3
PGSC0003DMG400024153 Solanum tuberosum HOM05D006859 ORTHO05D007990 1.3e-59 234.2 320 50.6
MBI04_g28364_MAGBIO Magnolia biondii HOM05D006859 ORTHO05D007990 2.1e-57 226.9 293 52.6
Glyma.11G037300 Glycine max HOM05D006859 ORTHO05D007990 8.1e-57 224.9 233 57.5
HanXRQChr06g0164541 Helianthus annuus HOM05D006859 ORTHO05D007990 5.8e-55 218.8 290 50.7
Nitab4.5_0000506g0100 Nicotiana tabacum HOM05D006859 ORTHO05D007990 3.7e-54 216.1 282 54.3
Sc01g0008110 Simmondsia chinensis HOM05D006859 ORTHO05D007990 4.9e-54 215.7 238 57.6
Nitab4.5_0003456g0040 Nicotiana tabacum HOM05D006859 ORTHO05D007990 7.1e-53 211.8 322 48.1
Thecc.03G243500 Theobroma cacao HOM05D006859 ORTHO05D007990 9.2e-53 211.5 234 58.5
Actinidia02186 Actinidia chinensis HOM05D006859 ORTHO05D007990 3.5e-52 209.5 295 52.9
Sopen06g021040 Solanum pennellii HOM05D006859 ORTHO05D007990 3.5e-52 209.5 283 51.6
CsaV3_3G049860 Cucumis sativus L. HOM05D006859 ORTHO05D007990 1.1e-50 204.5 294 49.3
Lj2C227G12 Lonicera japonica HOM05D006859 ORTHO05D007990 2.8e-49 199.9 256 52.3
Gohir.D03G167400 Gossypium hirsutum HOM05D006859 ORTHO05D007990 3.6e-49 199.5 259 48.3
CARHR224240 Cardamine hirsuta HOM05D006859 ORTHO05D007990 4.0e-48 196.1 294 46.9
Lsat_1_v5_gn_1_53480 Lactuca sativa HOM05D006859 ORTHO05D007990 2.0e-47 193.7 291 46.7
ECA236G3610 Erigeron canadensis HOM05D006859 ORTHO05D007990 2.6e-47 193.4 266 50.0
HPP92_014892 Vanilla planifolia HOM05D006859 ORTHO05D007990 9.9e-47 191.4 290 45.2
Gorai.003G177100 Gossypium raimondii HOM05D006859 ORTHO05D007990 1.1e-45 188.0 259 44.0
Thhalv10025654m.g Eutrema salsugineum HOM05D006859 ORTHO05D007990 7.1e-45 185.3 290 44.5
Gohir.A03G005200 Gossypium hirsutum HOM05D006859 ORTHO05D007990 2.7e-44 183.3 259 46.7
Sp7g16620 Schrenkiella parvula HOM05D006859 ORTHO05D007990 3.5e-44 183.0 291 44.3
AT4G17540 Arabidopsis thaliana HOM05D006859 ORTHO05D007990 4.6e-44 182.6 295 44.7
Solyc06g060890.4 Solanum lycopersicum HOM05D006859 ORTHO05D007990 6.0e-44 182.2 254 48.0
BcaNung00082 Brassica carinata HOM05D006859 ORTHO05D007990 1.3e-43 181.0 294 45.6
A01p09620 Brassica napus HOM05D006859 ORTHO05D007990 1.7e-43 180.6 294 44.9
Carub.0007s2385 Capsella rubella HOM05D006859 ORTHO05D007990 3.0e-43 179.9 293 44.4
ATR0665G206 Amborella trichopoda HOM05D006859 ORTHO05D007990 3.9e-43 179.5 289 44.6
BraA01t00904Z Brassica rapa HOM05D006859 ORTHO05D007990 5.1e-43 179.1 294 44.6
BcaC09g51632 Brassica carinata HOM05D006859 ORTHO05D007990 5.6e-42 175.6 290 44.1
Zm00001eb391020 Zea mays HOM05D006859 ORTHO05D007990 9.6e-42 174.9 289 45.7
Os10g0563400 Oryza sativa ssp. japonica HOM05D006859 ORTHO05D007990 1.6e-41 174.1 307 44.3
CDE11G0841 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 2.8e-41 173.3 218 56.0
THA.LOC104798356 Tarenaya hassleriana HOM05D006859 ORTHO05D007990 2.8e-41 173.3 289 45.0
DCAR_004596 Daucus carota HOM05D006859 ORTHO05D007990 3.6e-41 172.9 263 47.5
C01p11190 Brassica napus HOM05D006859 ORTHO05D007990 6.2e-41 172.2 291 44.7
BolC1t01085H Brassica oleracea HOM05D006859 ORTHO05D007990 6.2e-41 172.2 291 44.3
SalBow6G1554 Salvia bowleyana HOM05D006859 ORTHO05D007990 5.3e-40 169.1 240 53.8
unitig_8.g3018 Utricularia gibba HOM05D000481 ORTHO05D007990 5.8e-39 165.6 287 46.3
AUR62018861 Chenopodium quinoa HOM05D006859 ORTHO05D007990 2.2e-38 163.7 227 47.6
SGA_v2.0_scaffold199G41240 Striga asiatica HOM05D006859 ORTHO05D007990 6.4e-38 162.2 251 45.8
Hma1.2p1_0840F.1_g226470 Hydrangea macrophylla HOM05D006859 ORTHO05D007990 4.6e-36 156.0 270 40.0
ClCG09G012800 Citrullus lanatus HOM05D006859 ORTHO05D007990 3.0e-35 153.3 287 39.7
CAN.G62.4 Capsicum annuum HOM05D006859 ORTHO05D007990 1.1e-34 151.4 203 45.3
Peaxi162Scf00190g00099 Petunia axillaris HOM05D006859 ORTHO05D007990 5.3e-32 142.5 214 43.5
Aa31LG6G280 Aethionema arabicum HOM05D006859 ORTHO05D007990 3.4e-31 139.8 259 43.2
AUR62007150 Chenopodium quinoa HOM05D006859 ORTHO05D007990 1.7e-30 137.5 222 43.7
AL7G37080 Arabidopsis lyrata HOM05D006859 ORTHO05D007990 1.9e-29 134.0 254 40.2
Sed0000052 Sechium edule HOM05D006859 ORTHO05D007990 3.0e-27 126.7 187 40.1
GSVIVG01007347001 Vitis vinifera HOM05D006859 ORTHO05D007990 8.1e-25 118.6 79 78.5
Glyma.11G037400 Glycine max HOM05D006859 ORTHO05D007990 6.9e-24 115.5 276 38.0
Oeu040677.2 Olea europaea HOM05D006859 ORTHO05D007990 7.6e-23 112.1 190 38.9
Phvul.002G001100 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 7.9e-20 102.1 262 37.0
VMungo1215G2895 Vigna mungo HOM05D006859 ORTHO05D007990 1.0e-19 101.7 262 34.7
Glyma.01G205500 Glycine max HOM05D006859 ORTHO05D007990 3.3e-18 96.7 221 37.6
Ah.07g199030 Amaranthus hybridus HOM05D006859 ORTHO05D007990 7.4e-18 95.5 75 73.3
DCAR_008336 Daucus carota HOM05D002294 ORTHO05D002367 9.6e-18 95.1 263 33.1
AagrBONN_evm.TU.Sc2ySwM_228.2564 Anthoceros agrestis HOM05D006859 ORTHO05D007990 1.6e-17 94.4 313 31.0
Mapoly0075s0082 Marchantia polymorpha HOM05D006859 ORTHO05D007990 1.3e-14 84.7 169 39.6
PSO717G0090 Papaver somniferum HOM05D006859 ORTHO05D007990 1.1e-13 81.6 193 37.8
COL.COLO4_21682 Corchorus olitorius HOM05D006859 ORTHO05D007990 6.1e-12 75.9 144 38.9
CDE11G0285 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 1.8e-11 74.3 99 54.5
CBR_g52283 Chara braunii HOM05D006859 ORTHO05D007990 3.3e-10 70.1 321 30.8
GSVIVG01007348001 Vitis vinifera HOM05D006859 ORTHO05D007990 1.6e-09 67.8 125 36.0
Pp3c27_6080 Physcomitrium patens HOM05D006859 ORTHO05D007990 2.8e-09 67.0 302 30.1


User provided reference genes

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