Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 3.9e-176 621.3 306 100.0
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 3.1e-157 558.5 306 88.6
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 4.1e-157 558.1 306 88.9
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 1.2e-156 556.6 306 90.5
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 1.1e-154 550.1 306 86.9
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 1.2e-153 546.6 306 86.9
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 2.7e-153 545.4 306 86.6
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 8.0e-153 543.9 306 86.9
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 1.0e-152 543.5 306 86.6
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 6.7e-152 540.8 306 86.3
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 8.8e-152 540.4 306 85.6
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 3.7e-150 535.0 306 85.6
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 8.5e-147 523.9 306 83.0
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 1.5e-146 523.1 306 83.0
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 1.9e-146 522.7 306 82.0
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 4.2e-146 521.5 306 82.7
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 7.2e-146 520.8 306 81.7
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 7.2e-146 520.8 306 82.0
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 7.2e-146 520.8 307 81.4
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 5.2e-144 514.6 306 82.7
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 6.7e-144 514.2 306 80.7
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 8.8e-144 513.8 307 80.8
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 1.5e-143 513.1 307 81.4
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 1.5e-143 513.1 306 80.4
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 2.0e-143 512.7 307 81.8
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 2.6e-143 512.3 307 80.1
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 4.4e-143 511.5 307 80.1
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 7.5e-143 510.8 307 81.1
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 1.3e-142 510.0 306 79.7
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 1.3e-142 510.0 307 80.5
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 1.7e-142 509.6 307 80.5
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 3.7e-142 508.4 307 79.2
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 3.7e-142 508.4 307 80.1
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 3.7e-142 508.4 307 80.1
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.8e-141 506.1 307 80.5
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 4.1e-141 505.0 307 78.8
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 5.3e-141 504.6 307 80.1
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 5.3e-141 504.6 307 79.2
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 7.0e-141 504.2 307 80.1
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 1.2e-140 503.4 307 79.5
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 1.6e-140 503.1 307 80.5
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 5.9e-140 501.1 322 76.1
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 1.7e-139 499.6 307 79.5
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 1.7e-139 499.6 307 79.5
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 2.2e-139 499.2 307 79.2
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 1.1e-138 496.9 307 79.8
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 5.5e-138 494.6 306 78.1
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 2.1e-137 492.7 307 77.2
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 2.7e-137 492.3 304 78.3
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 1.0e-136 490.3 390 65.6
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 1.0e-136 490.3 307 76.5
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 1.0e-136 490.3 307 76.9
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 7.5e-135 484.2 307 73.6
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 8.3e-134 480.7 370 66.2
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 2.4e-133 479.2 307 73.9
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 4.1e-133 478.4 307 74.3
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 7.0e-133 477.6 307 74.6
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 5.9e-132 474.6 307 73.9
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 1.7e-131 473.0 288 79.2
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 2.3e-131 472.6 358 68.2
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 5.0e-131 471.5 307 73.6
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 7.2e-130 467.6 306 72.2
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 9.5e-130 467.2 307 73.3
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 9.5e-130 467.2 307 72.6
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 3.6e-129 465.3 306 71.2
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 4.7e-129 464.9 307 71.3
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 1.8e-128 463.0 307 72.0
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 1.2e-127 460.3 307 71.7
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 4.4e-127 458.4 307 70.7
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 7.5e-127 457.6 284 78.9
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 9.8e-127 457.2 276 79.3
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 2.2e-126 456.1 371 62.5
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 6.3e-126 454.5 275 79.3
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 1.6e-124 449.9 292 76.7
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 2.2e-118 429.5 277 73.3
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 4.9e-118 428.3 293 73.0
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 5.4e-117 424.9 307 70.0
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 6.0e-116 421.4 301 68.8
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 2.3e-112 409.5 277 70.4
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 4.0e-112 408.7 243 81.5
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 2.6e-111 406.0 307 65.5
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 9.8e-111 404.1 310 61.9
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 1.9e-109 399.8 310 61.3
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 2.8e-105 386.0 235 80.0
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 1.4e-104 383.6 305 59.3
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 4.0e-104 382.1 307 65.5
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 1.7e-99 366.7 273 63.7
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 1.9e-98 363.2 236 73.3
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 3.8e-78 295.8 316 48.7
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 5.1e-75 285.4 243 59.7
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 2.5e-74 283.1 190 70.0
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 6.1e-60 235.3 310 41.6
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 1.8e-59 233.8 130 84.6
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 1.0e-54 218.0 282 43.3
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 7.9e-52 208.4 565 28.1
ATR0019G012 Amborella trichopoda HOM05D007381 ORTHO05D009496 1.0e-51 208.0 148 70.3
CSS0032842 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 5.1e-51 205.7 170 63.5
Ca_17124_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 1.1e-29 134.8 88 81.8
Ca_08895_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 2.7e-23 113.6 72 80.6
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 8.5e-22 108.6 70 67.1
Cfa025505 Carpinus fangiana HOM05D007381 ORTHO05D009496 1.9e-21 107.5 222 32.0
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 2.3e-19 100.5 96 49.0
Rhsim08G0136300 Rhododendron simsii HOM05D007381 ORTHO05D006450 3.2e-08 63.5 53 66.0
Cre06.g298950 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D143024 7.0e-08 62.4 152 32.9


User provided reference genes

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