Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0378591 Lupinus albus HOM05D006615 ORTHO05D007999 3.1e-103 378.6 214 100.0
Medtr5g016890 Medicago truncatula HOM05D006615 ORTHO05D007999 3.3e-89 332.0 212 87.3
Psat2g167840 Pisum sativum HOM05D006615 ORTHO05D007999 1.6e-88 329.7 212 79.7
TPR.G26907 Trifolium pratense HOM05D006615 ORTHO05D007999 2.2e-88 329.3 212 79.7
Lj2g0018871 Lotus japonicus HOM05D006615 ORTHO05D007999 9.0e-87 323.9 207 89.9
Glyma.11G054300 Glycine max HOM05D006615 ORTHO05D007999 1.5e-86 323.2 212 86.8
Phvul.002G017400 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 5.0e-85 318.2 212 85.4
arahy.Tifrunner.gnm1.ann1.XJ9ES7 Arachis hypogaea HOM05D006615 ORTHO05D007999 8.5e-85 317.4 211 87.7
Glyma.01G187800 Glycine max HOM05D006615 ORTHO05D007999 1.1e-84 317.0 206 87.4
arahy.Tifrunner.gnm1.ann1.8K3JW9 Arachis hypogaea HOM05D006615 ORTHO05D007999 2.1e-83 312.8 211 86.7
VMungo1215G1750 Vigna mungo HOM05D006615 ORTHO05D007999 2.1e-83 312.8 212 85.8
QL06p040870 Quercus lobata HOM05D006615 ORTHO05D007999 2.3e-82 309.3 207 84.1
Lalb_Chr05g0213321 Lupinus albus HOM05D006615 ORTHO05D007999 4.3e-81 305.1 214 74.8
Haze_15377 Corylus avellana HOM05D006615 ORTHO05D007999 1.0e-77 293.9 207 79.7
MD15G1285700 Malus domestica HOM05D006615 ORTHO05D007999 1.7e-77 293.1 210 76.7
Ciclev10026421m.g Citrus clementina HOM05D006615 ORTHO05D007999 2.2e-77 292.7 210 76.2
Gohir.A02G156700 Gossypium hirsutum HOM05D006615 ORTHO05D007999 2.2e-77 292.7 210 77.1
Rhsim10G0115300 Rhododendron simsii HOM05D006615 ORTHO05D007999 8.5e-77 290.8 209 77.0
Atru.chr3.300 Acer truncatum HOM05D006615 ORTHO05D007999 1.1e-76 290.4 212 76.9
Actinidia12040 Actinidia chinensis HOM05D006615 ORTHO05D007999 1.1e-76 290.4 207 69.1
TAR625G0931 Trochodendron aralioides HOM05D006615 ORTHO05D007999 1.1e-76 290.4 207 76.8
MD02G1174700 Malus domestica HOM05D006615 ORTHO05D007999 1.4e-76 290.0 210 77.6
Nn5g30349 Nelumbo nucifera HOM05D006615 ORTHO05D007999 1.4e-76 290.0 207 77.3
RcHm_v2.0_Chr2g0105951 Rosa chinensis HOM05D006615 ORTHO05D007999 1.4e-76 290.0 210 77.6
vmacro05309 Vaccinium macrocarpon HOM05D006615 ORTHO05D007999 1.4e-76 290.0 209 76.1
Gorai.003G025500 Gossypium raimondii HOM05D006615 ORTHO05D007999 2.5e-76 289.3 210 76.2
FAN26G2627 Fragaria x ananassa HOM05D006615 ORTHO05D007999 3.2e-76 288.9 210 77.6
FAN28G0965 Fragaria x ananassa HOM05D006615 ORTHO05D007999 3.2e-76 288.9 210 77.6
Prupe.7G131100 Prunus persica HOM05D006615 ORTHO05D007999 3.2e-76 288.9 207 78.3
FAN23G1998 Fragaria x ananassa HOM05D006615 ORTHO05D007999 4.2e-76 288.5 210 77.1
COL.COLO4_11446 Corchorus olitorius HOM05D006615 ORTHO05D007999 1.2e-75 287.0 210 75.7
FvH4_1g16240 Fragaria vesca HOM05D006615 ORTHO05D007999 1.2e-75 287.0 210 77.1
GSVIVG01022099001 Vitis vinifera HOM05D006615 ORTHO05D007999 1.2e-75 287.0 207 68.6
Gohir.D03G024000 Gossypium hirsutum HOM05D006615 ORTHO05D007999 2.1e-75 286.2 210 75.7
Gohir.A12G072600 Gossypium hirsutum HOM05D006615 ORTHO05D007999 4.7e-75 285.0 210 75.7
CSS0020579 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 7.9e-75 284.3 207 73.4
Duzib147G0216 Durio zibethinus HOM05D006615 ORTHO05D007999 1.0e-74 283.9 210 76.7
Thecc.01G059100 Theobroma cacao HOM05D006615 ORTHO05D007999 1.4e-74 283.5 210 76.7
Aqoxy5G01194 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 2.3e-74 282.7 207 66.2
TAR381G0796 Trochodendron aralioides HOM05D006615 ORTHO05D007999 3.9e-74 282.0 207 76.3
FAN19G1431 Fragaria x ananassa HOM05D006615 ORTHO05D007999 5.1e-74 281.6 210 76.2
CiPaw.01G016200 Carya illinoinensis HOM05D006615 ORTHO05D007999 6.7e-74 281.2 212 65.1
CsaV3_2G016460 Cucumis sativus L. HOM05D006615 ORTHO05D007999 8.8e-74 280.8 212 72.6
Cpa.g.sc55.125 Carica papaya HOM05D006615 ORTHO05D007999 1.1e-73 280.4 210 65.7
Gohir.D12G070500 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.1e-73 280.4 210 69.5
Gorai.008G077500 Gossypium raimondii HOM05D006615 ORTHO05D007999 1.1e-73 280.4 210 69.5
ClCG02G012310 Citrullus lanatus HOM05D006615 ORTHO05D007999 1.5e-73 280.0 210 74.3
Manes.12G104500 Manihot esculenta HOM05D006615 ORTHO05D007999 1.5e-73 280.0 206 77.2
Dinv26838 Davidia involucrata HOM05D000573 ORTHO05D000425 4.4e-73 278.5 164 79.3
Sabra05G0110900 Salix brachista HOM05D006615 ORTHO05D007999 4.4e-73 278.5 207 74.9
Migut.H00418 Erythranthe guttata HOM05D006615 ORTHO05D007999 9.7e-73 277.3 207 76.3
CDE02G1946 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 1.7e-72 276.6 212 71.2
CSS0005072 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 2.2e-72 276.2 207 65.2
Peaxi162Scf00549g00014 Petunia axillaris HOM05D006615 ORTHO05D007999 2.8e-72 275.8 207 74.9
Sed0009491 Sechium edule HOM05D006615 ORTHO05D007999 2.8e-72 275.8 212 70.3
Cc07_g06140 Coffea canephora HOM05D006615 ORTHO05D007999 3.7e-72 275.4 212 74.1
Sabra07G0040600 Salix brachista HOM05D006615 ORTHO05D007999 3.7e-72 275.4 212 65.6
MELO3C020856.2 Cucumis melo HOM05D006615 ORTHO05D007999 4.8e-72 275.0 221 70.1
Ah.03g145470 Amaranthus hybridus HOM05D006615 ORTHO05D007999 8.2e-72 274.2 212 63.2
CDE04G2757 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 1.1e-71 273.9 212 70.8
AUR62001910 Chenopodium quinoa HOM05D006615 ORTHO05D007999 7.0e-71 271.2 212 62.3
Potri.005G140000 Populus trichocarpa HOM05D006615 ORTHO05D007999 1.2e-70 270.4 207 73.4
Lsat_1_v5_gn_4_164980 Lactuca sativa HOM05D006615 ORTHO05D007999 1.6e-70 270.0 208 72.6
Lj4C151G8 Lonicera japonica HOM05D006615 ORTHO05D007999 1.6e-70 270.0 208 71.2
MSTRG.2870 Avicennia marina HOM05D006615 ORTHO05D007999 2.0e-70 269.6 207 69.6
AUR62003898 Chenopodium quinoa HOM05D006615 ORTHO05D007999 2.6e-70 269.2 212 61.8
Sopen02g037800 Solanum pennellii HOM05D006615 ORTHO05D007999 3.5e-70 268.9 204 75.0
HanXRQChr09g0263661 Helianthus annuus HOM05D006615 ORTHO05D007999 4.5e-70 268.5 206 72.8
Solyc02g093220.3 Solanum lycopersicum HOM05D006615 ORTHO05D007999 5.9e-70 268.1 204 74.5
PGSC0003DMG400004030 Solanum tuberosum HOM05D006615 ORTHO05D007999 5.9e-70 268.1 204 74.5
THA.LOC104821250 Tarenaya hassleriana HOM05D006615 ORTHO05D007999 5.9e-70 268.1 207 75.4
CAN.G370.40 Capsicum annuum HOM05D006615 ORTHO05D007999 1.0e-69 267.3 204 74.5
Oeu049899.1 Olea europaea HOM05D006615 ORTHO05D007999 3.8e-69 265.4 206 71.4
PSO170G0414 Papaver somniferum HOM05D006615 ORTHO05D007999 6.5e-69 264.6 212 61.3
HPP92_026439 Vanilla planifolia HOM05D006615 ORTHO05D007999 6.5e-69 264.6 210 71.4
ATR0800G077 Amborella trichopoda HOM05D006615 ORTHO05D007999 8.5e-69 264.2 207 72.9
C07p24600 Brassica napus HOM05D006615 ORTHO05D007999 8.5e-69 264.2 207 72.5
BolC7t42980H Brassica oleracea HOM05D006615 ORTHO05D007999 8.5e-69 264.2 207 72.5
BraA07t29407Z Brassica rapa HOM05D006615 ORTHO05D007999 8.5e-69 264.2 207 72.5
Hma1.2p1_0670F.1_g200450 Hydrangea macrophylla HOM05D006615 ORTHO05D007999 1.1e-68 263.8 206 64.6
Thhalv10004869m.g Eutrema salsugineum HOM05D006615 ORTHO05D007999 2.5e-68 262.7 207 71.5
A07p16820 Brassica napus HOM05D006615 ORTHO05D007999 3.2e-68 262.3 207 72.0
ECA232G2507 Erigeron canadensis HOM05D002761 ORTHO05D003351 3.2e-68 262.3 169 71.6
Sc03g0001700 Simmondsia chinensis HOM05D006615 ORTHO05D007999 3.2e-68 262.3 209 60.8
Nitab4.5_0002694g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 5.5e-68 261.5 207 72.0
AL8G44220 Arabidopsis lyrata HOM05D006615 ORTHO05D007999 7.2e-68 261.2 207 72.0
BcaB02g09933 Brassica carinata HOM05D006615 ORTHO05D007999 9.4e-68 260.8 207 72.0
AT5G67140 Arabidopsis thaliana HOM05D006615 ORTHO05D007999 1.6e-67 260.0 207 72.0
PSO210G0040 Papaver somniferum HOM05D006615 ORTHO05D007999 1.6e-67 260.0 212 60.4
Cfa004036 Carpinus fangiana HOM05D006615 ORTHO05D007999 2.7e-67 259.2 190 76.8
Nitab4.5_0002765g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 2.7e-67 259.2 207 72.5
Oeu014828.1 Olea europaea HOM05D006615 ORTHO05D007999 3.6e-67 258.8 207 70.0
Sp2g29550 Schrenkiella parvula HOM05D006615 ORTHO05D007999 3.6e-67 258.8 207 71.5
Hund16348 Selenicereus undatus HOM05D006615 ORTHO05D007999 3.6e-67 258.8 261 53.3
Aa31LG1G15650 Aethionema arabicum HOM05D006615 ORTHO05D007999 4.7e-67 258.5 210 71.0
Carub.0008s2737 Capsella rubella HOM05D006615 ORTHO05D007999 4.7e-67 258.5 207 71.5
CARHR280510 Cardamine hirsuta HOM05D006615 ORTHO05D007999 8.0e-67 257.7 207 71.5
TWI09G1033 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 4.0e-66 255.4 215 59.5
DCAR_010880 Daucus carota HOM05D006615 ORTHO05D007999 1.1e-65 253.8 207 68.1
MELO3C020857.2 Cucumis melo HOM05D006615 ORTHO05D007999 1.5e-65 253.4 210 68.6
Eucgr.H01687 Eucalyptus grandis HOM05D006615 ORTHO05D007999 9.7e-65 250.8 209 58.4
CsaV3_2G016470 Cucumis sativus L. HOM05D006615 ORTHO05D007999 2.2e-64 249.6 210 68.1
Atru.chr3.288 Acer truncatum HOM05D006615 ORTHO05D007999 1.1e-63 247.3 184 75.5
Oeu017456.1 Olea europaea HOM05D006615 ORTHO05D007999 2.4e-63 246.1 207 69.6
Os06g0166000 Oryza sativa ssp. japonica HOM05D006615 ORTHO05D007999 9.4e-60 234.2 209 55.5
SEGI_10636 Sequoiadendron giganteum HOM05D006615 ORTHO05D007999 1.6e-59 233.4 209 60.3
Zm00001eb375600 Zea mays HOM05D006615 ORTHO05D007999 2.6e-57 226.1 207 55.1
Actinidia36482 Actinidia chinensis HOM05D006615 ORTHO05D007999 4.8e-56 221.9 198 60.1
CANSAT01G0297 Cannabis sativa HOM05D006615 ORTHO05D007999 3.5e-54 215.7 207 56.0
SGA_v2.0_scaffold15G07326 Striga asiatica HOM05D006615 ORTHO05D007999 1.7e-48 196.8 207 62.8
Pp3c7_15700 Physcomitrium patens HOM05D006615 ORTHO05D007999 7.0e-47 191.4 203 57.1
unitig_748.g8604 Utricularia gibba HOM05D002191 ORTHO05D007999 9.2e-47 191.0 164 57.9
Mapoly0005s0095 Marchantia polymorpha HOM05D006615 ORTHO05D007999 8.6e-45 184.5 166 53.6
AagrBONN_evm.TU.Sc2ySwM_344.5234 Anthoceros agrestis HOM05D006615 ORTHO05D007999 9.5e-44 181.0 169 53.3
Aqoxy6G01271 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 2.0e-38 163.3 209 55.0
SMO164G0246 Selaginella moellendorffii HOM05D006615 ORTHO05D007999 5.2e-34 148.7 156 46.8
Potri.007G045601 Populus trichocarpa HOM05D006615 ORTHO05D007999 5.8e-33 145.2 101 74.3
TWI73G1298 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 5.8e-33 145.2 135 51.9
ClCG02G012330 Citrullus lanatus HOM05D006615 ORTHO05D007999 1.5e-17 94.0 81 56.8
MSTRG.3434 Avicennia marina HOM05D006615 ORTHO05D007999 5.4e-15 85.5 86 72.1
Phvul.008G146300 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 6.6e-13 78.6 45 80.0
Aqoxy4G02446 Aquilegia oxysepala HOM05D001818 ORTHO05D001780 1.3e-08 64.3 94 37.2
FAN20G2926 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-07 61.2 108 37.0
FAN15G1401 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-07 60.8 107 36.4
FvH4_2g32511 Fragaria vesca HOM05D002813 ORTHO05D003203 4.2e-07 59.3 75 40.0
FAN24G2117 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.2e-07 59.3 75 40.0
RcHm_v2.0_Chr3g0487451 Rosa chinensis HOM05D032618 ORTHO05D007999 4.2e-07 59.3 52 53.8
FAN24G2983 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.4e-07 58.9 164 26.8
FvH4_2g32590 Fragaria vesca HOM05D002813 ORTHO05D003203 9.3e-07 58.2 111 36.9
FAN24G0821 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.3e-07 58.2 111 36.9
BcaC07g42481 Brassica carinata HOM05D000710 ORTHO05D000336 1.2e-06 57.8 151 29.8
FvH4_2g32630 Fragaria vesca HOM05D002813 ORTHO05D003203 2.7e-06 56.6 164 26.8
FAN23G0561 Fragaria x ananassa HOM05D000710 ORTHO05D000336 3.5e-06 56.2 164 28.0
FAN27G1770 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.0e-06 55.5 78 41.0
Sed0020917 Sechium edule HOM05D001905 ORTHO05D001820 6.0e-06 55.5 167 29.3


User provided reference genes

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