Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0378261 Lupinus albus HOM05D008581 ORTHO05D011864 8.3e-48 193.4 96 100.0
Lalb_Chr16g0378441 Lupinus albus HOM05D008581 ORTHO05D011864 8.3e-48 193.4 96 100.0
Lalb_Chr05g0213241 Lupinus albus HOM05D008581 ORTHO05D011864 9.5e-28 126.7 109 66.1
Psat4g087360 Pisum sativum HOM05D008581 ORTHO05D011864 4.0e-18 94.7 113 51.3
Phvul.003G245400 Phaseolus vulgaris HOM05D008581 ORTHO05D009966 6.8e-18 94.0 97 56.7
Glyma.11G057100 Glycine max HOM05D008581 ORTHO05D011864 2.6e-17 92.0 101 56.4
Ca_21178_v3 Cicer arietinum L. HOM05D008581 ORTHO05D009966 3.7e-16 88.2 110 47.3
Ca_22185_v3 Cicer arietinum L. HOM05D008581 ORTHO05D009966 3.7e-16 88.2 110 47.3
Glyma.01G185100 Glycine max HOM05D008581 ORTHO05D009966 1.9e-15 85.9 105 53.3
TPR.G745 Trifolium pratense HOM05D008581 ORTHO05D009966 4.1e-15 84.7 114 48.2
Phvul.002G020000 Phaseolus vulgaris HOM05D008581 ORTHO05D011864 1.0e-13 80.1 98 54.1
VMungo1215G0067 Vigna mungo HOM05D008581 ORTHO05D011864 4.3e-12 74.7 100 51.0
arahy.Tifrunner.gnm1.ann1.HVX4VE Arachis hypogaea HOM05D010906 ORTHO05D011864 7.3e-12 73.9 96 49.0
Gohir.A02G159700 Gossypium hirsutum HOM05D013202 ORTHO05D009966 2.1e-11 72.4 101 50.5
arahy.Tifrunner.gnm1.ann1.7MI303 Arachis hypogaea HOM05D010906 ORTHO05D011864 4.7e-11 71.2 96 46.9
Gorai.003G022300 Gossypium raimondii HOM05D013202 ORTHO05D009966 1.4e-10 69.7 101 49.5
Manes.12G100000 Manihot esculenta HOM05D008581 ORTHO05D009966 1.8e-10 69.3 125 40.8
Gohir.D03G020800 Gossypium hirsutum HOM05D013202 ORTHO05D009966 2.4e-10 68.9 101 51.5
Gorai.003G022000 Gossypium raimondii HOM05D013202 ORTHO05D009966 2.4e-10 68.9 101 51.5
Gorai.003G022200 Gossypium raimondii HOM05D013202 ORTHO05D009966 2.4e-10 68.9 101 51.5
Gohir.A02G159800 Gossypium hirsutum HOM05D013202 ORTHO05D009966 4.0e-10 68.2 101 51.5
QL06p042132 Quercus lobata HOM05D008581 ORTHO05D009966 6.8e-10 67.4 108 40.7
Gorai.003G022400 Gossypium raimondii HOM05D013202 ORTHO05D009966 1.2e-09 66.6 100 48.0
Atru.chr3.367 Acer truncatum HOM05D008581 ORTHO05D009966 1.5e-09 66.2 123 38.2
COL.COLO4_11388 Corchorus olitorius HOM05D008581 ORTHO05D009966 1.5e-09 66.2 120 40.8
Gohir.D03G021000 Gossypium hirsutum HOM05D013202 ORTHO05D009966 1.5e-09 66.2 100 48.0
Thecc.01G053400 Theobroma cacao HOM05D008581 ORTHO05D009966 1.5e-09 66.2 122 44.3
Lj7C64T2 Lonicera japonica HOM05D008581 ORTHO05D009966 2.6e-09 65.5 104 40.4
Glyma.17G176900 Glycine max HOM05D008581 ORTHO05D009966 3.4e-09 65.1 96 42.7
Lj7C67T5 Lonicera japonica HOM05D008581 ORTHO05D009966 4.4e-09 64.7 106 41.5
Lj7C67G2 Lonicera japonica HOM05D008581 ORTHO05D009966 5.8e-09 64.3 100 41.0
TPR.G19008 Trifolium pratense HOM05D010906 ORTHO05D011864 5.8e-09 64.3 110 50.9
Cfa004000 Carpinus fangiana HOM05D008581 ORTHO05D009966 9.9e-09 63.5 118 40.7
DCAR_025723 Daucus carota HOM05D008581 ORTHO05D009966 1.3e-08 63.2 53 60.4
Atru.chr3.365 Acer truncatum HOM05D008581 ORTHO05D009966 1.7e-08 62.8 127 38.6
Lj4g0014874 Lotus japonicus HOM05D008581 ORTHO05D011864 1.7e-08 62.8 104 44.2
QL06p042091 Quercus lobata HOM05D008581 ORTHO05D009966 4.9e-08 61.2 118 38.1
Lsat_1_v5_gn_4_167560 Lactuca sativa HOM05D008581 ORTHO05D009966 6.4e-08 60.8 99 42.4
QL06p042046 Quercus lobata HOM05D008581 ORTHO05D009966 6.4e-08 60.8 115 37.4
AL4G13410 Arabidopsis lyrata HOM05D010906 ORTHO05D011864 8.4e-08 60.5 95 44.2
Ca_21180_v3 Cicer arietinum L. HOM05D010906 ORTHO05D011864 8.4e-08 60.5 76 50.0
Hma1.2p1_1415F.1_g282020 Hydrangea macrophylla HOM05D008581 ORTHO05D009966 8.4e-08 60.5 116 37.9
BcaC07g40985 Brassica carinata HOM05D010906 ORTHO05D011864 1.1e-07 60.1 89 43.8
C08p39870 Brassica napus HOM05D010906 ORTHO05D011864 1.1e-07 60.1 89 43.8
BolC8t51559H Brassica oleracea HOM05D010906 ORTHO05D011864 1.1e-07 60.1 89 43.8
Ciclev10027209m.g Citrus clementina HOM05D008581 ORTHO05D009966 1.1e-07 60.1 125 38.4
Carub.0004s0265 Capsella rubella HOM05D010906 ORTHO05D011864 1.4e-07 59.7 89 46.1
Sabra07G0037300 Salix brachista HOM05D008581 ORTHO05D009966 1.4e-07 59.7 116 41.4
A09p56910 Brassica napus HOM05D010906 ORTHO05D011864 1.9e-07 59.3 89 43.8
BraA09t41083Z Brassica rapa HOM05D010906 ORTHO05D011864 1.9e-07 59.3 89 43.8
C04p52770 Brassica napus HOM05D010906 ORTHO05D011864 3.2e-07 58.5 89 44.9
Manes.13G126600 Manihot esculenta HOM05D008581 ORTHO05D009966 3.2e-07 58.5 122 37.7
A04p17870 Brassica napus HOM05D010906 ORTHO05D011864 4.2e-07 58.2 89 44.9
BraA04t17407Z Brassica rapa HOM05D010906 ORTHO05D011864 4.2e-07 58.2 89 44.9
Eucgr.I00949 Eucalyptus grandis HOM05D022674 ORTHO05D009966 9.3e-07 57.0 64 48.4
Lj7C67T3 Lonicera japonica HOM05D008581 ORTHO05D009966 9.3e-07 57.0 102 37.3
Prupe.7G136000 Prunus persica HOM05D007434 ORTHO05D009541 9.3e-07 57.0 92 42.4
BolC4t26842H Brassica oleracea HOM05D010906 ORTHO05D011864 1.2e-06 56.6 89 43.8
FAN28G2751 Fragaria x ananassa HOM05D018300 ORTHO05D020671 1.2e-06 56.6 80 45.0
Hma1.2p1_0200F.1_g086080 Hydrangea macrophylla HOM05D008581 ORTHO05D009966 1.2e-06 56.6 119 36.1
Dinv39871 Davidia involucrata HOM05D008581 ORTHO05D009966 2.1e-06 55.8 66 50.0
Rhsim10G0119400 Rhododendron simsii HOM05D008581 ORTHO05D009966 2.1e-06 55.8 43 72.1
BcaB06g27898 Brassica carinata HOM05D010906 ORTHO05D011864 3.5e-06 55.1 89 43.8
A02p44390 Brassica napus HOM05D011091 ORTHO05D013198 3.5e-06 55.1 97 34.0
Peaxi162Scf00916g00007 Petunia axillaris HOM05D012691 ORTHO05D009966 3.5e-06 55.1 110 36.4
AT2G23440 Arabidopsis thaliana HOM05D010906 ORTHO05D011864 4.6e-06 54.7 89 41.6
Potri.007G042000 Populus trichocarpa HOM05D008581 ORTHO05D009966 4.6e-06 54.7 114 38.6
QL06p042201 Quercus lobata HOM05D007434 ORTHO05D009541 4.6e-06 54.7 82 39.0
Potri.005G136800 Populus trichocarpa HOM05D008581 ORTHO05D009966 6.0e-06 54.3 107 42.1
ECA232G4194 Erigeron canadensis HOM05D008581 ORTHO05D009966 7.8e-06 53.9 46 60.9


User provided reference genes

Program Settings