Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0378281 Lupinus albus HOM05D001089 ORTHO05D000920 8.0e-31 136.3 64 100.0
Lalb_Chr16g0378031 Lupinus albus HOM05D001089 ORTHO05D000920 6.8e-14 80.1 46 80.4
TPR.G31556 Trifolium pratense HOM05D001089 ORTHO05D000920 8.3e-12 73.2 46 73.9
Psat4g090280 Pisum sativum HOM05D001089 ORTHO05D000920 1.1e-11 72.8 46 71.7
Glyma.16G143000 Glycine max HOM05D001089 ORTHO05D000920 4.1e-11 70.9 46 71.7
VMungo0251G0650 Vigna mungo HOM05D001089 ORTHO05D000920 4.1e-11 70.9 46 71.7
Medtr8g078495 Medicago truncatula HOM05D001089 ORTHO05D000920 9.2e-11 69.7 46 67.4
Phvul.003G250400 Phaseolus vulgaris HOM05D001089 ORTHO05D000920 9.2e-11 69.7 46 71.7
Oeu032906.1 Olea europaea HOM05D001089 ORTHO05D000920 1.2e-10 69.3 46 67.4
PGR119G1161 Punica granatum HOM05D001089 ORTHO05D000920 1.2e-10 69.3 46 67.4
Sed0007635 Sechium edule HOM05D001089 ORTHO05D000920 1.6e-10 68.9 46 69.6
Cpa.g.sc15.114 Carica papaya HOM05D001089 ORTHO05D000920 2.0e-10 68.6 46 67.4
Cfa004249 Carpinus fangiana HOM05D001089 ORTHO05D000920 2.0e-10 68.6 46 67.4
Haze_15150 Corylus avellana HOM05D001089 ORTHO05D000920 2.0e-10 68.6 46 67.4
Glyma.02G060202 Glycine max HOM05D001089 ORTHO05D000920 2.0e-10 68.6 40 80.0
Lalb_Chr05g0227381 Lupinus albus HOM05D001089 ORTHO05D000920 2.0e-10 68.6 46 67.4
Manes.13G134400 Manihot esculenta HOM05D001089 ORTHO05D000920 2.0e-10 68.6 46 67.4
Rhsim08G0110300 Rhododendron simsii HOM05D001089 ORTHO05D000920 2.0e-10 68.6 46 69.6
ClCG01G016300 Citrullus lanatus HOM05D001089 ORTHO05D000920 2.7e-10 68.2 46 69.6
MELO3C007501.2 Cucumis melo HOM05D001089 ORTHO05D000920 2.7e-10 68.2 46 69.6
CsaV3_6G042610 Cucumis sativus L. HOM05D001089 ORTHO05D000920 2.7e-10 68.2 46 69.6
Dinv39935 Davidia involucrata HOM05D001089 ORTHO05D000920 2.7e-10 68.2 46 67.4
Duzib187G0231 Durio zibethinus HOM05D001089 ORTHO05D000920 2.7e-10 68.2 46 67.4
Duzib264G0668 Durio zibethinus HOM05D001089 ORTHO05D000920 2.7e-10 68.2 40 80.0
Eucgr.I02489 Eucalyptus grandis HOM05D001089 ORTHO05D000920 2.7e-10 68.2 43 72.1
QL06p044492 Quercus lobata HOM05D001089 ORTHO05D000920 2.7e-10 68.2 46 67.4
Thecc.01G044000 Theobroma cacao HOM05D001089 ORTHO05D000920 2.7e-10 68.2 46 67.4
Lj4C134G13 Lonicera japonica HOM05D001089 ORTHO05D000920 4.6e-10 67.4 46 65.2
Potri.007G032800 Populus trichocarpa HOM05D001089 ORTHO05D000920 4.6e-10 67.4 46 65.2
Sabra07G0028700 Salix brachista HOM05D001089 ORTHO05D000920 4.6e-10 67.4 46 65.2
GSVIVG01019044001 Vitis vinifera HOM05D001089 ORTHO05D000920 4.6e-10 67.4 46 65.2
CSS0002886 Camellia sinensis var. sinensis HOM05D001089 ORTHO05D000920 6.0e-10 67.0 46 63.0
CSS0010299 Camellia sinensis var. sinensis HOM05D001089 ORTHO05D000920 6.0e-10 67.0 46 63.0
Duzib147G0836 Durio zibethinus HOM05D001089 ORTHO05D000920 6.0e-10 67.0 46 67.4
vmacro17875 Vaccinium macrocarpon HOM05D001089 ORTHO05D000920 6.0e-10 67.0 46 67.4
Ca_22240_v3 Cicer arietinum L. HOM05D001089 ORTHO05D000920 7.8e-10 66.6 41 80.5
Oeu043833.1 Olea europaea HOM05D001089 ORTHO05D000920 7.8e-10 66.6 40 75.0
Peaxi162Scf00535g00416 Petunia axillaris HOM05D001089 ORTHO05D000920 7.8e-10 66.6 46 65.2
COL.COLO4_22161 Corchorus olitorius HOM05D001089 ORTHO05D000920 1.0e-09 66.2 46 65.2
Lsat_1_v5_gn_4_176201 Lactuca sativa HOM05D001089 ORTHO05D000920 1.0e-09 66.2 46 63.0
MD15G1271400 Malus domestica HOM05D001089 ORTHO05D000920 1.0e-09 66.2 40 75.0
Prupe.7G146800 Prunus persica HOM05D001089 ORTHO05D000920 1.0e-09 66.2 40 75.0
arahy.Tifrunner.gnm1.ann1.QA5YK5 Arachis hypogaea HOM05D001089 ORTHO05D000920 1.3e-09 65.9 46 65.2
CANSAT01G0291 Cannabis sativa HOM05D001089 ORTHO05D000920 1.3e-09 65.9 40 75.0
CiPaw.01G030500 Carya illinoinensis HOM05D001089 ORTHO05D000920 1.3e-09 65.9 46 65.2
Atru.chr3.489 Acer truncatum HOM05D001089 ORTHO05D000920 1.7e-09 65.5 46 65.2
arahy.Tifrunner.gnm1.ann1.YX3SGW Arachis hypogaea HOM05D001089 ORTHO05D000920 1.7e-09 65.5 46 65.2
unitig_736.g22254 Utricularia gibba HOM05D001089 ORTHO05D000920 1.7e-09 65.5 46 63.0
Actinidia19150 Actinidia chinensis HOM05D001089 ORTHO05D000920 2.3e-09 65.1 46 65.2
Glyma.11G062200 Glycine max HOM05D001089 ORTHO05D000920 2.3e-09 65.1 46 65.2
Solyc02g089950.2 Solanum lycopersicum HOM05D001089 ORTHO05D000920 2.3e-09 65.1 46 65.2
Sopen02g034640 Solanum pennellii HOM05D001089 ORTHO05D000920 2.3e-09 65.1 46 65.2
PGSC0003DMG400010040 Solanum tuberosum HOM05D001089 ORTHO05D000920 2.3e-09 65.1 46 65.2
DCAR_010956 Daucus carota HOM05D001089 ORTHO05D000920 3.0e-09 64.7 46 60.9
Nitab4.5_0000483g0030 Nicotiana tabacum HOM05D001089 ORTHO05D000920 3.0e-09 64.7 46 63.0
Nitab4.5_0004932g0030 Nicotiana tabacum HOM05D001089 ORTHO05D000920 3.0e-09 64.7 46 63.0
TAR610G0004 Trochodendron aralioides HOM05D001089 ORTHO05D000920 3.0e-09 64.7 46 63.0
Dinv26787 Davidia involucrata HOM05D001089 ORTHO05D000920 3.9e-09 64.3 46 63.0
Lj4g0016712 Lotus japonicus HOM05D001089 ORTHO05D000920 3.9e-09 64.3 40 75.0
MBI16_g10974_MAGBIO Magnolia biondii HOM05D001089 ORTHO05D000920 3.9e-09 64.3 44 63.6
MD02G1156900 Malus domestica HOM05D001089 ORTHO05D000920 3.9e-09 64.3 40 72.5
CiPaw.02G014100 Carya illinoinensis HOM05D001089 ORTHO05D000920 5.0e-09 63.9 46 63.0
Glyma.01G180000 Glycine max HOM05D001089 ORTHO05D000920 5.0e-09 63.9 46 65.2
Phvul.002G024700 Phaseolus vulgaris HOM05D001089 ORTHO05D000920 5.0e-09 63.9 40 72.5
Gohir.A02G162500 Gossypium hirsutum HOM05D001089 ORTHO05D000920 6.6e-09 63.5 46 63.0
Gohir.D03G018000 Gossypium hirsutum HOM05D001089 ORTHO05D000920 6.6e-09 63.5 46 63.0
Gorai.003G018200 Gossypium raimondii HOM05D001089 ORTHO05D000920 6.6e-09 63.5 46 63.0
RcHm_v2.0_Chr2g0103001 Rosa chinensis HOM05D001089 ORTHO05D000920 6.6e-09 63.5 40 70.0
arahy.Tifrunner.gnm1.ann1.9RI59H Arachis hypogaea HOM05D001089 ORTHO05D000920 8.6e-09 63.2 50 58.0
arahy.Tifrunner.gnm1.ann1.Q0FKJ2 Arachis hypogaea HOM05D001089 ORTHO05D000920 8.6e-09 63.2 50 58.0
HanXRQChr09g0265131 Helianthus annuus HOM05D001089 ORTHO05D000920 8.6e-09 63.2 46 58.7
Hma1.2p1_0261F.1_g104810 Hydrangea macrophylla HOM05D001089 ORTHO05D000920 8.6e-09 63.2 46 60.9
TWI73G0853 Tripterygium wilfordii HOM05D001089 ORTHO05D000920 8.6e-09 63.2 46 60.9
VMungo1215G2910 Vigna mungo HOM05D001089 ORTHO05D000920 8.6e-09 63.2 46 63.0
MSTRG.15410 Avicennia marina HOM05D001089 ORTHO05D000920 1.1e-08 62.8 47 66.0
Cc07_g05290 Coffea canephora HOM05D001089 ORTHO05D000920 1.1e-08 62.8 47 63.8
Nn1g05125 Nelumbo nucifera HOM05D001089 ORTHO05D000920 1.1e-08 62.8 46 60.9
Sc03g0001060 Simmondsia chinensis HOM05D001089 ORTHO05D000920 1.5e-08 62.4 46 58.7
DCAR_025662 Daucus carota HOM05D001089 ORTHO05D000920 1.9e-08 62.0 46 54.3
Aqoxy6G00993 Aquilegia oxysepala HOM05D001089 ORTHO05D000920 3.3e-08 61.2 39 66.7
CAN.G836.10 Capsicum annuum HOM05D001089 ORTHO05D000920 3.3e-08 61.2 40 67.5
Nn5g29472 Nelumbo nucifera HOM05D001089 ORTHO05D000920 3.3e-08 61.2 40 67.5
Actinidia30993 Actinidia chinensis HOM05D001089 ORTHO05D000920 5.6e-08 60.5 46 60.9
Aqoxy6G00995 Aquilegia oxysepala HOM05D001089 ORTHO05D000920 5.6e-08 60.5 39 66.7
MSTRG.3400 Avicennia marina HOM05D001089 ORTHO05D000920 5.6e-08 60.5 40 70.0
CDE04G3104 Ceratophyllum demersum HOM05D001089 ORTHO05D000920 5.6e-08 60.5 42 66.7
Thhalv10010286m.g Eutrema salsugineum HOM05D001089 ORTHO05D000920 5.6e-08 60.5 40 62.5
MBI16_g13156_MAGBIO Magnolia biondii HOM05D001089 ORTHO05D000920 5.6e-08 60.5 40 70.0
Hund16570 Selenicereus undatus HOM05D001089 ORTHO05D000920 5.6e-08 60.5 47 63.8
FAN23G1164 Fragaria x ananassa HOM05D001089 ORTHO05D000920 7.3e-08 60.1 40 62.5
Lj2g0026204 Lotus japonicus HOM05D001089 ORTHO05D000920 7.3e-08 60.1 46 58.7
FvH4_1g14330 Fragaria vesca HOM05D001089 ORTHO05D000920 9.5e-08 59.7 40 62.5
FAN19G2559 Fragaria x ananassa HOM05D001089 ORTHO05D000920 9.5e-08 59.7 40 62.5
FAN26G3362 Fragaria x ananassa HOM05D001089 ORTHO05D000920 9.5e-08 59.7 40 62.5
FAN28G0961 Fragaria x ananassa HOM05D001089 ORTHO05D000920 9.5e-08 59.7 40 62.5
BcaB01g00582 Brassica carinata HOM05D001089 ORTHO05D000920 1.2e-07 59.3 40 60.0
Carub.0005s1713 Capsella rubella HOM05D001089 ORTHO05D000920 1.2e-07 59.3 40 62.5
CDE06G0716 Ceratophyllum demersum HOM05D001089 ORTHO05D000920 1.2e-07 59.3 42 64.3
SGA_v2.0_scaffold62G21535 Striga asiatica HOM05D001089 ORTHO05D000920 1.2e-07 59.3 40 67.5
Ah.03g142240 Amaranthus hybridus HOM05D001089 ORTHO05D000920 1.6e-07 58.9 46 56.5
EL10Ac6g14866 Beta vulgaris HOM05D001089 ORTHO05D000920 1.6e-07 58.9 46 56.5
AUR62003212 Chenopodium quinoa HOM05D001089 ORTHO05D000920 1.6e-07 58.9 46 56.5
Migut.K00849 Erythranthe guttata HOM05D001089 ORTHO05D000920 1.6e-07 58.9 40 65.0
PSO541G4920 Papaver somniferum HOM05D001089 ORTHO05D000920 1.6e-07 58.9 40 62.5
PSO675G5406 Papaver somniferum HOM05D001089 ORTHO05D000920 1.6e-07 58.9 40 62.5
Sp5g11450 Schrenkiella parvula HOM05D001089 ORTHO05D000920 1.6e-07 58.9 40 60.0
Hund14128 Selenicereus undatus HOM05D001089 ORTHO05D000920 2.1e-07 58.5 40 65.0
Potri.005G129700 Populus trichocarpa HOM05D001089 ORTHO05D000920 2.8e-07 58.2 46 56.5
THA.LOC104826822 Tarenaya hassleriana HOM05D001089 ORTHO05D000920 2.8e-07 58.2 40 65.0
ECA232G1738 Erigeron canadensis HOM05D001089 ORTHO05D000920 3.6e-07 57.8 46 58.7
CARHR160290 Cardamine hirsuta HOM05D001089 ORTHO05D000920 8.1e-07 56.6 40 62.5
TAR628G1685 Trochodendron aralioides HOM05D001089 ORTHO05D000920 8.1e-07 56.6 40 62.5
AL5G31000 Arabidopsis lyrata HOM05D001089 ORTHO05D000920 1.1e-06 56.2 40 57.5
AT3G50780 Arabidopsis thaliana HOM05D001089 ORTHO05D000920 1.8e-06 55.5 40 60.0
ATR0733G031 Amborella trichopoda HOM05D001089 ORTHO05D000920 5.2e-06 53.9 46 50.0


User provided reference genes

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