Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0378241 Lupinus albus HOM05D005038 ORTHO05D006055 7.6e-98 360.5 186 100.0
Lalb_Chr16g0378421 Lupinus albus HOM05D005038 ORTHO05D006055 1.9e-88 329.3 174 97.1
arahy.Tifrunner.gnm1.ann1.MSK3BR Arachis hypogaea HOM05D005038 ORTHO05D006055 1.6e-68 263.1 177 79.1
arahy.Tifrunner.gnm1.ann1.S4TQX4 Arachis hypogaea HOM05D005038 ORTHO05D006055 7.7e-66 254.2 172 79.7
CiPaw.01G021700 Carya illinoinensis HOM05D005038 ORTHO05D006055 1.7e-65 253.1 172 77.3
Glyma.17G176200 Glycine max HOM05D005038 ORTHO05D006055 2.5e-64 249.2 172 77.3
Glyma.05G090600 Glycine max HOM05D005038 ORTHO05D006055 3.2e-64 248.8 172 77.3
Lj2g0014661 Lotus japonicus HOM05D005038 ORTHO05D006055 1.6e-63 246.5 172 75.6
CANSAT01G0585 Cannabis sativa HOM05D005038 ORTHO05D006055 2.7e-63 245.7 174 73.6
Sopen02g035200 Solanum pennellii HOM05D005038 ORTHO05D006055 2.7e-63 245.7 174 74.7
Lsat_1_v5_gn_2_84360 Lactuca sativa HOM05D005038 ORTHO05D006055 4.6e-63 245.0 172 74.4
Ciclev10026264m.g Citrus clementina HOM05D005038 ORTHO05D006055 7.9e-63 244.2 172 75.6
Haze_15429 Corylus avellana HOM05D005038 ORTHO05D006055 7.9e-63 244.2 172 74.4
FvH4_1g15680 Fragaria vesca HOM05D005038 ORTHO05D006055 7.9e-63 244.2 172 74.4
FAN19G2696 Fragaria x ananassa HOM05D005038 ORTHO05D006055 7.9e-63 244.2 172 74.4
PGSC0003DMG400010021 Solanum tuberosum HOM05D005038 ORTHO05D006055 7.9e-63 244.2 172 75.0
FAN23G2750 Fragaria x ananassa HOM05D005038 ORTHO05D006055 1.0e-62 243.8 185 72.4
FAN28G1979 Fragaria x ananassa HOM05D005038 ORTHO05D006055 1.4e-62 243.4 185 72.4
Nitab4.5_0000310g0200 Nicotiana tabacum HOM05D005038 ORTHO05D006055 1.4e-62 243.4 172 74.4
Lj4g0011946 Lotus japonicus HOM05D005038 ORTHO05D006055 1.8e-62 243.0 172 77.3
Lalb_Chr05g0226661 Lupinus albus HOM05D005038 ORTHO05D006055 1.8e-62 243.0 168 76.2
Nitab4.5_0000440g0200 Nicotiana tabacum HOM05D005038 ORTHO05D006055 1.8e-62 243.0 172 74.4
RcHm_v2.0_Chr2g0104991 Rosa chinensis HOM05D005038 ORTHO05D006055 1.8e-62 243.0 172 74.4
Phvul.003G245900 Phaseolus vulgaris HOM05D005038 ORTHO05D006055 3.0e-62 242.3 169 77.5
Solyc02g090540.4 Solanum lycopersicum HOM05D005038 ORTHO05D006055 3.9e-62 241.9 172 74.4
ECA238G0061 Erigeron canadensis HOM05D005038 ORTHO05D006055 6.7e-62 241.1 172 73.8
FAN28G2421 Fragaria x ananassa HOM05D005038 ORTHO05D006055 6.7e-62 241.1 185 71.9
CSS0005034 Camellia sinensis var. sinensis HOM05D005038 ORTHO05D006055 8.8e-62 240.7 172 75.0
Eucgr.H01997 Eucalyptus grandis HOM05D005038 ORTHO05D006055 8.8e-62 240.7 172 73.3
FAN26G2456 Fragaria x ananassa HOM05D005038 ORTHO05D006055 8.8e-62 240.7 184 71.7
TAR628G1256 Trochodendron aralioides HOM05D005038 ORTHO05D006055 1.5e-61 240.0 172 73.8
Aqoxy5G01298 Aquilegia oxysepala HOM05D005038 ORTHO05D006055 2.5e-61 239.2 172 72.1
VMungo0251G1314 Vigna mungo HOM05D005038 ORTHO05D006055 2.5e-61 239.2 166 75.9
Dinv39876 Davidia involucrata HOM05D005038 ORTHO05D006055 3.3e-61 238.8 172 73.3
Peaxi162Scf00916g00134 Petunia axillaris HOM05D005038 ORTHO05D006055 3.3e-61 238.8 172 74.4
CAN.G836.64 Capsicum annuum HOM05D005038 ORTHO05D006055 4.3e-61 238.4 166 73.5
PGR102G3322 Punica granatum HOM05D005038 ORTHO05D006055 5.7e-61 238.0 172 72.7
Hund16340 Selenicereus undatus HOM05D005038 ORTHO05D006055 7.4e-61 237.7 173 71.1
CSS0034792 Camellia sinensis var. sinensis HOM05D005038 ORTHO05D006055 1.3e-60 236.9 172 73.8
Prupe.7G136500 Prunus persica HOM05D005038 ORTHO05D006055 1.3e-60 236.9 172 72.7
Duzib147G1247 Durio zibethinus HOM05D005038 ORTHO05D006055 1.7e-60 236.5 172 73.3
Nitab4.5_0013126g0010 Nicotiana tabacum HOM05D005038 ORTHO05D006055 2.8e-60 235.7 170 75.3
Migut.H00455 Erythranthe guttata HOM05D005038 ORTHO05D006055 3.7e-60 235.3 172 73.8
COL.COLO4_11379 Corchorus olitorius HOM05D005038 ORTHO05D006055 4.8e-60 235.0 172 72.7
Nn5g30191 Nelumbo nucifera HOM05D005038 ORTHO05D006055 4.8e-60 235.0 172 72.1
MD02G1168700 Malus domestica HOM05D005038 ORTHO05D006055 6.3e-60 234.6 172 72.1
Medtr8g079810 Medicago truncatula HOM05D005038 ORTHO05D006055 6.3e-60 234.6 165 77.6
Gohir.A11G190200 Gossypium hirsutum HOM05D005038 ORTHO05D006055 1.1e-59 233.8 172 71.5
Phvul.002G020600 Phaseolus vulgaris HOM05D005038 ORTHO05D006055 1.1e-59 233.8 168 72.0
Rhsim08G0102300 Rhododendron simsii HOM05D005038 ORTHO05D006055 1.1e-59 233.8 172 75.0
Glyma.11G057800 Glycine max HOM05D005038 ORTHO05D006055 1.8e-59 233.0 173 75.1
QL06p042351 Quercus lobata HOM05D005038 ORTHO05D006055 1.8e-59 233.0 172 70.9
Gorai.007G210800 Gossypium raimondii HOM05D005038 ORTHO05D006055 2.4e-59 232.6 172 71.5
HanXRQChr03g0061121 Helianthus annuus HOM05D005038 ORTHO05D006055 3.1e-59 232.3 172 69.8
Potri.005G136200 Populus trichocarpa HOM05D005038 ORTHO05D006055 3.1e-59 232.3 172 72.1
Sabra05G0108900 Salix brachista HOM05D005038 ORTHO05D006055 3.1e-59 232.3 172 72.1
Gohir.D11G196900 Gossypium hirsutum HOM05D005038 ORTHO05D006055 4.1e-59 231.9 172 70.9
Gorai.011G105100 Gossypium raimondii HOM05D005038 ORTHO05D006055 4.1e-59 231.9 174 70.7
TWI09G0447 Tripterygium wilfordii HOM05D005038 ORTHO05D006055 4.1e-59 231.9 172 72.1
CAN.G165.30 Capsicum annuum HOM05D005038 ORTHO05D006055 5.3e-59 231.5 172 72.1
Cpa.g.sc6.381 Carica papaya HOM05D005038 ORTHO05D006055 5.3e-59 231.5 172 72.1
GSVIVG01006576001 Vitis vinifera HOM05D005038 ORTHO05D006055 5.3e-59 231.5 180 71.7
Sopen02g015220 Solanum pennellii HOM05D005038 ORTHO05D006055 9.1e-59 230.7 172 71.5
Gohir.A10G092400 Gossypium hirsutum HOM05D005038 ORTHO05D006055 1.2e-58 230.3 174 70.1
Peaxi162Scf00049g00149 Petunia axillaris HOM05D005038 ORTHO05D006055 1.2e-58 230.3 171 71.3
ClCG01G016690 Citrullus lanatus HOM05D005038 ORTHO05D006055 1.5e-58 229.9 172 71.5
CiPaw.02G009600 Carya illinoinensis HOM05D005038 ORTHO05D006055 2.0e-58 229.6 172 71.5
MELO3C007547.2 Cucumis melo HOM05D005038 ORTHO05D006055 2.0e-58 229.6 172 71.5
Manes.13G126100 Manihot esculenta HOM05D005038 ORTHO05D006055 2.0e-58 229.6 172 71.5
Gohir.D10G095800 Gossypium hirsutum HOM05D005038 ORTHO05D006055 2.6e-58 229.2 174 69.5
HanXRQChr14g0448271 Helianthus annuus HOM05D005038 ORTHO05D006055 2.6e-58 229.2 172 71.5
Psat4g087880 Pisum sativum HOM05D005038 ORTHO05D006055 2.6e-58 229.2 165 77.0
CsaV3_6G043110 Cucumis sativus L. HOM05D005038 ORTHO05D006055 3.4e-58 228.8 172 70.9
Solyc02g065060.3 Solanum lycopersicum HOM05D005038 ORTHO05D006055 3.4e-58 228.8 172 70.9
Nn1g05863 Nelumbo nucifera HOM05D005038 ORTHO05D006055 4.5e-58 228.4 172 67.4
Thecc.01G052200 Theobroma cacao HOM05D005038 ORTHO05D006055 4.5e-58 228.4 172 70.9
MSTRG.23767 Avicennia marina HOM05D005038 ORTHO05D006055 7.7e-58 227.6 170 71.2
Hma1.2p1_0047F.1_g027670 Hydrangea macrophylla HOM05D005038 ORTHO05D006055 7.7e-58 227.6 172 70.9
THA.LOC104821271 Tarenaya hassleriana HOM05D005038 ORTHO05D006055 1.0e-57 227.3 172 69.2
THA.LOC104827003 Tarenaya hassleriana HOM05D005038 ORTHO05D006055 1.0e-57 227.3 172 66.9
Atru.chr3.399 Acer truncatum HOM05D005038 ORTHO05D006055 1.3e-57 226.9 173 70.5
Duzib264G0221 Durio zibethinus HOM05D005038 ORTHO05D006055 1.7e-57 226.5 172 70.3
Sed0007672 Sechium edule HOM05D005038 ORTHO05D006055 1.7e-57 226.5 172 70.3
BcaB01g00609 Brassica carinata HOM05D005038 ORTHO05D006055 2.2e-57 226.1 172 68.6
AL5G30700 Arabidopsis lyrata HOM05D005038 ORTHO05D006055 2.9e-57 225.7 172 68.0
PSO541G2053 Papaver somniferum HOM05D005038 ORTHO05D006055 2.9e-57 225.7 172 72.1
VMungo1215G2888 Vigna mungo HOM05D005038 ORTHO05D006055 3.8e-57 225.3 175 68.0
PSO170G1702 Papaver somniferum HOM05D005038 ORTHO05D006055 5.0e-57 224.9 195 63.1
PGSC0003DMG400000767 Solanum tuberosum HOM05D005038 ORTHO05D006055 5.0e-57 224.9 166 70.5
TAR376G0303 Trochodendron aralioides HOM05D005038 ORTHO05D006055 5.0e-57 224.9 173 71.1
BcaC09g50037 Brassica carinata HOM05D005038 ORTHO05D006055 6.5e-57 224.6 172 66.9
A01p24040 Brassica napus HOM05D005038 ORTHO05D006055 6.5e-57 224.6 172 66.9
C01p29730 Brassica napus HOM05D005038 ORTHO05D006055 6.5e-57 224.6 172 66.9
BolC1t02913H Brassica oleracea HOM05D005038 ORTHO05D006055 6.5e-57 224.6 172 66.9
BraA01t02316Z Brassica rapa HOM05D005038 ORTHO05D006055 6.5e-57 224.6 172 66.9
Nitab4.5_0000728g0080 Nicotiana tabacum HOM05D005038 ORTHO05D006055 6.5e-57 224.6 172 70.9
CARHR160070 Cardamine hirsuta HOM05D005038 ORTHO05D006055 1.1e-56 223.8 172 68.0
AT3G50560 Arabidopsis thaliana HOM05D005038 ORTHO05D006055 1.4e-56 223.4 172 68.0
BcaB05g23223 Brassica carinata HOM05D005038 ORTHO05D006055 1.9e-56 223.0 172 66.3
Carub.0005s1688 Capsella rubella HOM05D005038 ORTHO05D006055 1.9e-56 223.0 172 66.9
Oeu021840.1 Olea europaea HOM05D005038 ORTHO05D006055 1.9e-56 223.0 178 69.7
C08p25620 Brassica napus HOM05D005038 ORTHO05D006055 2.5e-56 222.6 172 66.3
BolC8t50181H Brassica oleracea HOM05D005038 ORTHO05D006055 2.5e-56 222.6 172 66.3
BraA09t39820Z Brassica rapa HOM05D005038 ORTHO05D006055 2.5e-56 222.6 172 66.3
Thhalv10010624m.g Eutrema salsugineum HOM05D005038 ORTHO05D006055 2.5e-56 222.6 172 66.3
BcaC07g39516 Brassica carinata HOM05D005038 ORTHO05D006055 3.2e-56 222.2 172 66.3
Sp5g11650 Schrenkiella parvula HOM05D005038 ORTHO05D006055 3.2e-56 222.2 172 66.9
A09p43580 Brassica napus HOM05D005038 ORTHO05D006055 5.5e-56 221.5 172 65.7
Potri.007G040900 Populus trichocarpa HOM05D005038 ORTHO05D006055 5.5e-56 221.5 172 70.9
Aa31LG4G18730 Aethionema arabicum HOM05D005038 ORTHO05D006055 9.4e-56 220.7 173 68.2
PSO675G4848 Papaver somniferum HOM05D005038 ORTHO05D006055 9.4e-56 220.7 172 70.3
Cc07_g05830 Coffea canephora HOM05D005038 ORTHO05D006055 1.2e-55 220.3 172 68.6
Hund13568 Selenicereus undatus HOM05D005038 ORTHO05D006055 4.7e-55 218.4 167 68.3
PSO017G3935 Papaver somniferum HOM05D005038 ORTHO05D006055 1.8e-54 216.5 197 59.4
PSO732G0767 Papaver somniferum HOM05D005038 ORTHO05D006055 3.0e-54 215.7 191 62.3
Actinidia16508 Actinidia chinensis HOM05D005038 ORTHO05D006055 5.1e-54 214.9 197 62.9
Lj7C62T0 Lonicera japonica HOM05D005038 ORTHO05D006055 2.8e-52 209.1 160 67.5
Sabra07G0036600 Salix brachista HOM05D005038 ORTHO05D006055 2.8e-52 209.1 187 64.7
PSO675G5181 Papaver somniferum HOM05D005038 ORTHO05D006055 4.8e-52 208.4 192 59.9
SEGI_27725 Sequoiadendron giganteum HOM05D005038 ORTHO05D006055 8.2e-52 207.6 163 63.2
PSO675G1229 Papaver somniferum HOM05D005038 ORTHO05D006055 1.1e-51 207.2 190 61.1
ATR0097G001 Amborella trichopoda HOM05D005038 ORTHO05D006055 1.8e-51 206.5 160 67.5
TPR.G19012 Trifolium pratense HOM05D005038 ORTHO05D006055 7.0e-51 204.5 146 74.7
Os08g0476300 Oryza sativa ssp. japonica HOM05D005038 ORTHO05D006055 5.9e-50 201.4 169 61.5
Zm00001eb038220 Zea mays HOM05D005038 ORTHO05D006055 1.0e-49 200.7 182 59.9
AUR62003853 Chenopodium quinoa HOM05D005038 ORTHO05D006055 1.3e-49 200.3 174 61.5
CDE03G0279 Ceratophyllum demersum HOM05D005038 ORTHO05D006055 1.9e-48 196.4 172 62.2
Lj4A139T89 Lonicera japonica HOM05D005038 ORTHO05D006055 9.4e-48 194.1 178 65.2
EL10Ac6g15150 Beta vulgaris HOM05D005038 ORTHO05D006055 1.8e-46 189.9 163 63.2
Lj7C59T8 Lonicera japonica HOM05D005038 ORTHO05D006055 2.3e-46 189.5 157 65.6
Pp3c25_14660 Physcomitrium patens HOM05D005038 ORTHO05D006055 1.3e-41 173.7 163 56.4
vmacro17934 Vaccinium macrocarpon HOM05D005038 ORTHO05D006055 4.2e-40 168.7 124 70.2
SMO364G0608 Selaginella moellendorffii HOM05D005038 ORTHO05D006055 2.1e-39 166.4 162 54.9
Mapoly0021s0094 Marchantia polymorpha HOM05D005038 ORTHO05D006055 8.0e-39 164.5 164 53.7
Dinv29965 Davidia involucrata HOM05D005038 ORTHO05D006055 1.0e-38 164.1 172 55.8
SGA_v2.0_scaffold15G07261 Striga asiatica HOM05D005038 ORTHO05D006055 3.0e-38 162.5 168 56.5
arahy.Tifrunner.gnm1.ann1.647UNH Arachis hypogaea HOM05D005038 ORTHO05D006055 4.1e-27 125.6 86 80.2
Pp3c4_31290 Physcomitrium patens HOM05D005038 ORTHO05D006055 1.1e-11 74.3 167 28.7
Mapoly0010s0198 Marchantia polymorpha HOM05D005038 ORTHO05D006055 1.5e-08 63.9 154 28.6
Peaxi162Scf00069g01432 Petunia axillaris HOM05D003236 ORTHO05D003620 4.0e-06 55.8 155 29.0
ECA248G2845 Erigeron canadensis HOM05D003236 ORTHO05D003620 5.2e-06 55.5 162 27.2
PRCOL_00004339 Prasinoderma coloniale HOM05D005038 ORTHO05D006055 5.2e-06 55.5 156 26.3
unitig_747.g21751 Utricularia gibba HOM05D002673 ORTHO05D002766 5.2e-06 55.5 137 31.4
SEGI_23586 Sequoiadendron giganteum HOM05D003236 ORTHO05D003620 6.8e-06 55.1 156 25.6
Solyc06g054330.3 Solanum lycopersicum HOM05D003236 ORTHO05D003620 6.8e-06 55.1 156 28.2


User provided reference genes

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