Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0378091 Lupinus albus HOM05D007578 ORTHO05D009497 2.5e-63 245.7 174 100.0
Lalb_Chr16g0378311 Lupinus albus HOM05D007578 ORTHO05D009497 2.5e-63 245.7 174 100.0
arahy.Tifrunner.gnm1.ann1.UX6CPD Arachis hypogaea HOM05D007578 ORTHO05D009497 2.7e-33 146.0 173 73.4
arahy.Tifrunner.gnm1.ann1.25C3YR Arachis hypogaea HOM05D007578 ORTHO05D009497 2.3e-32 142.9 173 72.8
Ca_24809_v3 Cicer arietinum L. HOM05D007578 ORTHO05D009497 7.5e-31 137.9 160 63.8
Glyma.01G182600 Glycine max HOM05D007578 ORTHO05D009497 2.2e-30 136.3 170 71.2
Glyma.11G060900 Glycine max HOM05D007578 ORTHO05D009497 1.8e-29 133.3 170 70.0
Medtr5g018590 Medicago truncatula HOM05D007578 ORTHO05D009497 2.0e-28 129.8 160 64.4
TPR.G29848 Trifolium pratense HOM05D007578 ORTHO05D009497 2.0e-28 129.8 171 62.0
Phvul.002G023600 Phaseolus vulgaris HOM05D007578 ORTHO05D009497 2.7e-28 129.4 170 70.6
Psat0s4627g0160 Pisum sativum HOM05D007578 ORTHO05D009497 5.9e-28 128.3 160 65.0
Haze_15166 Corylus avellana HOM05D007578 ORTHO05D009497 2.8e-25 119.4 171 64.3
Cc07_g05400 Coffea canephora HOM05D007578 ORTHO05D009497 3.0e-24 115.9 149 67.8
Thecc.01G045800 Theobroma cacao HOM05D007578 ORTHO05D009497 5.7e-23 111.7 170 60.0
QL06p044247 Quercus lobata HOM05D007578 ORTHO05D009497 7.5e-23 111.3 165 59.4
Nitab4.5_0007463g0020 Nicotiana tabacum HOM05D007578 ORTHO05D009497 1.7e-22 110.2 128 71.9
Nitab4.5_0000108g0140 Nicotiana tabacum HOM05D007578 ORTHO05D009497 2.8e-22 109.4 128 71.1
Manes.13G132100 Manihot esculenta HOM05D007578 ORTHO05D009497 8.3e-22 107.8 163 62.0
COL.COLO4_22180 Corchorus olitorius HOM05D007578 ORTHO05D009497 1.8e-21 106.7 172 60.5
THA.LOC104804219 Tarenaya hassleriana HOM05D007578 ORTHO05D009497 1.8e-21 106.7 127 74.0
CiPaw.01G029100 Carya illinoinensis HOM05D007578 ORTHO05D009497 3.1e-21 105.9 172 61.6
Solyc02g090100.1 Solanum lycopersicum HOM05D007578 ORTHO05D009497 5.4e-21 105.1 128 73.4
Sopen02g034790 Solanum pennellii HOM05D007578 ORTHO05D009497 5.4e-21 105.1 128 73.4
Peaxi162Scf00535g00071 Petunia axillaris HOM05D007578 ORTHO05D009497 7.0e-21 104.8 157 58.6
Potri.007G034300 Populus trichocarpa HOM05D007578 ORTHO05D009497 9.2e-21 104.4 171 60.2
MSTRG.23805 Avicennia marina HOM05D007578 ORTHO05D009497 1.6e-20 103.6 173 54.9
Duzib147G1180 Durio zibethinus HOM05D007578 ORTHO05D009497 2.0e-20 103.2 166 60.2
Duzib264G1198 Durio zibethinus HOM05D007578 ORTHO05D009497 2.0e-20 103.2 172 55.2
Gohir.A02G161500 Gossypium hirsutum HOM05D007578 ORTHO05D009497 3.5e-20 102.4 172 51.2
Gorai.003G019400 Gossypium raimondii HOM05D007578 ORTHO05D009497 3.5e-20 102.4 172 52.9
Sabra07G0029900 Salix brachista HOM05D007578 ORTHO05D009497 7.8e-20 101.3 169 60.9
Gohir.A11G045100 Gossypium hirsutum HOM05D007578 ORTHO05D009497 1.0e-19 100.9 169 59.2
Migut.H00501 Erythranthe guttata HOM05D007578 ORTHO05D009497 1.3e-19 100.5 158 57.0
CAN.G836.20 Capsicum annuum HOM05D007578 ORTHO05D009497 2.3e-19 99.8 128 69.5
TAR628G0552 Trochodendron aralioides HOM05D007578 ORTHO05D009497 3.8e-19 99.0 134 70.9
Gohir.D11G048600 Gossypium hirsutum HOM05D007578 ORTHO05D009497 5.0e-19 98.6 172 59.9
Oeu032922.1 Olea europaea HOM05D007578 ORTHO05D009497 6.6e-19 98.2 162 59.9
SGA_v2.0_scaffold15G07205 Striga asiatica HOM05D007578 ORTHO05D009497 6.6e-19 98.2 133 66.2
TWI53G0440 Tripterygium wilfordii HOM05D007578 ORTHO05D009497 6.6e-19 98.2 124 74.2
Gorai.007G052200 Gossypium raimondii HOM05D007578 ORTHO05D009497 2.5e-18 96.3 172 59.3
TAR376G0355 Trochodendron aralioides HOM05D007578 ORTHO05D009497 2.5e-18 96.3 128 69.5
AL4G13660 Arabidopsis lyrata HOM05D007578 ORTHO05D009497 3.3e-18 95.9 129 65.1
Sed0003773 Sechium edule HOM05D007578 ORTHO05D009497 3.3e-18 95.9 129 69.0
CSS0031523 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 4.3e-18 95.5 164 56.7
CSS0032257 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 4.3e-18 95.5 164 56.7
Thhalv10000353m.g Eutrema salsugineum HOM05D007578 ORTHO05D009497 4.3e-18 95.5 127 66.9
PGSC0003DMG400037576 Solanum tuberosum HOM05D007578 ORTHO05D009497 4.3e-18 95.5 128 69.5
Sc03g0001220 Simmondsia chinensis HOM05D007578 ORTHO05D009497 5.6e-18 95.1 145 52.4
CARHR114700 Cardamine hirsuta HOM05D007578 ORTHO05D009497 7.3e-18 94.7 129 64.3
Lj4P136T24 Lonicera japonica HOM05D007578 ORTHO05D009497 9.5e-18 94.4 129 62.8
ClCG02G013060 Citrullus lanatus HOM05D007578 ORTHO05D009497 1.2e-17 94.0 150 63.3
SalBow1G1613 Salvia bowleyana HOM05D007578 ORTHO05D009497 2.8e-17 92.8 127 70.9
Aa31LG7G13200 Aethionema arabicum HOM05D007578 ORTHO05D009497 3.6e-17 92.4 152 58.6
BraA04t17423Z Brassica rapa HOM05D007578 ORTHO05D009497 3.6e-17 92.4 129 65.1
AT2G23670 Arabidopsis thaliana HOM05D007578 ORTHO05D009497 4.7e-17 92.0 163 58.9
A04p18050 Brassica napus HOM05D007578 ORTHO05D009497 4.7e-17 92.0 129 65.1
C04p52990 Brassica napus HOM05D007578 ORTHO05D009497 4.7e-17 92.0 129 65.1
BolC4t26860H Brassica oleracea HOM05D007578 ORTHO05D009497 4.7e-17 92.0 129 65.1
MELO3C020917.2 Cucumis melo HOM05D007578 ORTHO05D009497 4.7e-17 92.0 161 59.6
Gohir.D03G019000 Gossypium hirsutum HOM05D007578 ORTHO05D009497 1.0e-16 90.9 163 52.1
CANSAT01G2356 Cannabis sativa HOM05D007578 ORTHO05D009497 1.4e-16 90.5 133 67.7
Carub.0004s0288 Capsella rubella HOM05D007578 ORTHO05D009497 1.4e-16 90.5 129 65.1
Ah.03g142130 Amaranthus hybridus HOM05D007578 ORTHO05D009497 1.8e-16 90.1 153 61.4
CsaV3_2G017140 Cucumis sativus L. HOM05D007578 ORTHO05D009497 1.8e-16 90.1 162 59.9
Hma1.2p1_0261F.1_g104930 Hydrangea macrophylla HOM05D007578 ORTHO05D009497 2.3e-16 89.7 129 58.9
Sp4g02640 Schrenkiella parvula HOM05D007578 ORTHO05D009497 2.3e-16 89.7 145 57.9
DCAR_010946 Daucus carota HOM05D007578 ORTHO05D009497 3.0e-16 89.4 163 58.9
MBI07_g23234_MAGBIO Magnolia biondii HOM05D007578 ORTHO05D009497 4.0e-16 89.0 126 71.4
BcaB06g27923 Brassica carinata HOM05D007578 ORTHO05D009497 6.8e-16 88.2 167 53.9
CDE11G1131 Ceratophyllum demersum HOM05D007578 ORTHO05D009497 6.8e-16 88.2 130 56.9
Ciclev10026636m.g Citrus clementina HOM05D007578 ORTHO05D009497 2.0e-15 86.7 157 46.5
Cpa.g.sc15.63 Carica papaya HOM05D007578 ORTHO05D009497 3.4e-15 85.9 129 58.1
PGR102G1240 Punica granatum HOM05D007578 ORTHO05D009497 5.8e-15 85.1 160 58.1
AUR62027241 Chenopodium quinoa HOM05D003724 ORTHO05D009497 7.5e-15 84.7 138 64.5
EL10Ac6g14844 Beta vulgaris HOM05D007578 ORTHO05D009497 1.3e-14 84.0 149 52.3
Actinidia36527 Actinidia chinensis HOM05D007578 ORTHO05D009497 2.2e-14 83.2 123 68.3
Rhsim06G0070400 Rhododendron simsii HOM05D002920 ORTHO05D009497 2.9e-14 82.8 142 64.1
Lsat_1_v5_gn_3_94000 Lactuca sativa HOM05D007578 ORTHO05D009497 3.7e-14 82.4 124 61.3
Prupe.7G145300 Prunus persica HOM05D007578 ORTHO05D009497 4.9e-14 82.0 150 57.3
FAN19G1163 Fragaria x ananassa HOM05D007578 ORTHO05D009497 5.4e-13 78.6 147 61.2
FAN26G3047 Fragaria x ananassa HOM05D007578 ORTHO05D009497 5.4e-13 78.6 147 57.8
FAN23G2171 Fragaria x ananassa HOM05D007578 ORTHO05D009497 1.6e-12 77.0 146 57.5
FvH4_1g14510 Fragaria vesca HOM05D007578 ORTHO05D009497 2.0e-12 76.6 147 57.1
MD15G1273300 Malus domestica HOM05D007578 ORTHO05D009497 3.5e-12 75.9 168 52.4
Dinv39922 Davidia involucrata HOM05D007578 ORTHO05D009497 4.6e-12 75.5 212 47.6
MD02G1158500 Malus domestica HOM05D007578 ORTHO05D009497 6.0e-12 75.1 167 52.1
Dinv26776 Davidia involucrata HOM05D007578 ORTHO05D009497 3.0e-11 72.8 137 54.7
RcHm_v2.0_Chr2g0103251 Rosa chinensis HOM05D007578 ORTHO05D009497 3.0e-11 72.8 167 55.1
CAN.G1525.2 Capsicum annuum HOM05D007578 ORTHO05D009497 1.1e-10 70.9 115 65.2
HanXRQChr12g0378461 Helianthus annuus HOM05D007578 ORTHO05D009497 4.3e-10 68.9 123 42.3
ECA246G0471 Erigeron canadensis HOM05D007578 ORTHO05D009497 5.6e-10 68.6 116 62.1
PSO170G5738 Papaver somniferum HOM05D007578 ORTHO05D009497 5.6e-10 68.6 165 53.3
Aqoxy2G01906 Aquilegia oxysepala HOM05D007578 ORTHO05D009497 9.5e-10 67.8 143 57.3
Peaxi162Scf00150g00132 Petunia axillaris HOM05D007578 ORTHO05D009497 1.2e-09 67.4 107 65.4
HPP92_014833 Vanilla planifolia HOM05D007578 ORTHO05D009497 1.6e-09 67.0 128 47.7
ATR0787G067 Amborella trichopoda HOM05D007578 ORTHO05D009497 2.8e-09 66.2 126 50.0
PSO017G5052 Papaver somniferum HOM05D007578 ORTHO05D009497 4.7e-09 65.5 161 54.0
FAN28G2485 Fragaria x ananassa HOM05D007578 ORTHO05D009497 8.0e-09 64.7 101 64.4
Atru.chr3.471 Acer truncatum HOM05D007578 ORTHO05D009497 5.2e-08 62.0 161 46.0
unitig_21.g20937 Utricularia gibba HOM05D000261 ORTHO05D001168 6.4e-06 55.1 141 47.5


User provided reference genes

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