Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0376621 Lupinus albus HOM05D004299 ORTHO05D003557 2.8e-247 858.2 456 100.0
Lalb_Chr09g0320301 Lupinus albus HOM05D004299 ORTHO05D003557 3.5e-128 462.6 460 63.5
arahy.Tifrunner.gnm1.ann1.R3QID6 Arachis hypogaea HOM05D004299 ORTHO05D003557 5.9e-19 99.8 402 31.1
arahy.Tifrunner.gnm1.ann1.KHZX7Q Arachis hypogaea HOM05D004299 ORTHO05D003557 2.2e-18 97.8 427 31.1
Ca_04929_v3 Cicer arietinum L. HOM05D004299 ORTHO05D003557 4.7e-16 90.1 313 32.3
Glyma.11G092600 Glycine max HOM05D004299 ORTHO05D003557 6.8e-15 86.3 525 26.5
GSVIVG01024444001 Vitis vinifera HOM05D004299 ORTHO05D003557 6.8e-15 86.3 243 34.6
QL09p025753 Quercus lobata HOM05D004299 ORTHO05D003557 8.8e-15 85.9 397 28.5
Prupe.2G324100 Prunus persica HOM05D004299 ORTHO05D003557 1.2e-14 85.5 326 30.7
Lj3g0021850 Lotus japonicus HOM05D004299 ORTHO05D003557 1.5e-14 85.1 643 26.4
Lalb_Chr01g0001001 Lupinus albus HOM05D004299 ORTHO05D003557 1.5e-14 85.1 345 30.7
Haze_00596 Corylus avellana HOM05D004299 ORTHO05D003557 2.6e-14 84.3 434 25.6
PGR042G3162 Punica granatum HOM05D004299 ORTHO05D003557 2.6e-14 84.3 211 34.1
Cfa015894 Carpinus fangiana HOM05D004299 ORTHO05D003557 5.7e-14 83.2 290 29.3
Phvul.011G021300 Phaseolus vulgaris HOM05D004299 ORTHO05D003557 9.8e-14 82.4 366 29.8
Ciclev10023566m.g Citrus clementina HOM05D004299 ORTHO05D003557 2.2e-13 81.3 364 29.4
CiPaw.05G237300 Carya illinoinensis HOM05D004299 ORTHO05D003557 4.8e-13 80.1 412 27.2
Glyma.12G018900 Glycine max HOM05D004299 ORTHO05D003557 8.3e-13 79.3 657 24.0
ClCG01G005040 Citrullus lanatus HOM05D013728 ORTHO05D003557 1.8e-12 78.2 655 24.4
Manes.09G124200 Manihot esculenta HOM05D004299 ORTHO05D003557 9.1e-12 75.9 130 44.6
Atru.chr12.1996 Acer truncatum HOM05D004299 ORTHO05D003557 1.6e-11 75.1 233 33.9
Manes.08G164200 Manihot esculenta HOM05D004299 ORTHO05D003557 3.5e-11 73.9 158 39.9
TPR.G8414 Trifolium pratense HOM05D004299 ORTHO05D003557 5.9e-11 73.2 265 30.9
RcHm_v2.0_Chr1g0383881 Rosa chinensis HOM05D012506 ORTHO05D003557 1.3e-10 72.0 340 27.1
Actinidia08739 Actinidia chinensis HOM05D004299 ORTHO05D003557 2.9e-10 70.9 233 29.6
CANSAT35G1347 Cannabis sativa HOM05D004299 ORTHO05D003557 2.9e-10 70.9 141 41.8
FvH4_7g33621 Fragaria vesca HOM05D012506 ORTHO05D003557 6.6e-10 69.7 365 27.4
BraA03t10142Z Brassica rapa HOM05D004299 ORTHO05D003557 8.6e-10 69.3 358 27.4
Sc19g0000210 Simmondsia chinensis HOM05D004299 ORTHO05D003557 8.6e-10 69.3 115 40.9
FAN10G0189 Fragaria x ananassa HOM05D012506 ORTHO05D003557 1.1e-09 68.9 315 27.9
Sed0000182 Sechium edule HOM05D004299 ORTHO05D003557 1.1e-09 68.9 188 33.0
ECA246G3276 Erigeron canadensis HOM05D004299 ORTHO05D003557 1.5e-09 68.6 240 32.1
Medtr4g077590 Medicago truncatula HOM05D004299 ORTHO05D003557 1.5e-09 68.6 418 27.8
Sed0018309 Sechium edule HOM05D004299 ORTHO05D003557 1.5e-09 68.6 120 41.7
Psat7g171480 Pisum sativum HOM05D004299 ORTHO05D003557 1.9e-09 68.2 279 28.7
CsaV3_5G005290 Cucumis sativus L. HOM05D013728 ORTHO05D003557 2.5e-09 67.8 412 26.2
Sabra13G0071500 Salix brachista HOM05D004299 ORTHO05D003557 2.5e-09 67.8 299 27.4
FAN01G2289 Fragaria x ananassa HOM05D012506 ORTHO05D003557 3.3e-09 67.4 280 28.9
Actinidia34301 Actinidia chinensis HOM05D004299 ORTHO05D003557 4.2e-09 67.0 245 29.8
C03p09520 Brassica napus HOM05D004299 ORTHO05D003557 5.5e-09 66.6 230 32.6
MELO3C005430.2 Cucumis melo HOM05D013728 ORTHO05D003557 5.5e-09 66.6 418 24.4
ECA247G1921 Erigeron canadensis HOM05D004299 ORTHO05D003557 7.2e-09 66.2 294 29.6
Potri.019G046801 Populus trichocarpa HOM05D004299 ORTHO05D003557 7.2e-09 66.2 88 46.6
MD01G1233900 Malus domestica HOM05D004299 ORTHO05D003557 9.5e-09 65.9 472 26.5
Nn1g01977 Nelumbo nucifera HOM05D004299 ORTHO05D003557 1.2e-08 65.5 241 28.6
BcaB01g05216 Brassica carinata HOM05D004299 ORTHO05D003557 1.6e-08 65.1 355 27.3
CARHR196070 Cardamine hirsuta HOM05D004299 ORTHO05D003557 2.1e-08 64.7 206 31.6
Potri.013G081600 Populus trichocarpa HOM05D004299 ORTHO05D003557 2.1e-08 64.7 291 26.5
CsaV3_5G015680 Cucumis sativus L. HOM05D004299 ORTHO05D003557 2.8e-08 64.3 293 30.0
PGSC0003DMG400026934 Solanum tuberosum HOM05D004299 ORTHO05D003557 2.8e-08 64.3 139 38.1
BcaB01g04949 Brassica carinata HOM05D004299 ORTHO05D003557 3.6e-08 63.9 348 27.9
Dinv29171 Davidia involucrata HOM05D004299 ORTHO05D003557 3.6e-08 63.9 124 38.7
Migut.F00952 Erythranthe guttata HOM05D004299 ORTHO05D003557 3.6e-08 63.9 355 28.7
Eucgr.G02658 Eucalyptus grandis HOM05D004299 ORTHO05D003557 3.6e-08 63.9 407 24.8
FAN10G3788 Fragaria x ananassa HOM05D012506 ORTHO05D003557 3.6e-08 63.9 315 26.3
Hund21092 Selenicereus undatus HOM05D004299 ORTHO05D003557 3.6e-08 63.9 206 33.5
Solyc06g072810.4 Solanum lycopersicum HOM05D004299 ORTHO05D003557 3.6e-08 63.9 134 38.8
A03p08220 Brassica napus HOM05D004299 ORTHO05D003557 4.7e-08 63.5 338 27.5
SalBow4G2051 Salvia bowleyana HOM05D004299 ORTHO05D003557 6.1e-08 63.2 349 24.9
A02p03950 Brassica napus HOM05D004299 ORTHO05D003557 8.0e-08 62.8 457 25.4
Gorai.004G259400 Gossypium raimondii HOM05D004299 ORTHO05D003557 8.0e-08 62.8 313 31.6
vmacro06502 Vaccinium macrocarpon HOM05D004299 ORTHO05D003557 8.0e-08 62.8 325 27.7
Thhalv10013127m.g Eutrema salsugineum HOM05D004299 ORTHO05D003557 1.0e-07 62.4 250 30.4
TWI34G1775 Tripterygium wilfordii HOM05D004299 ORTHO05D003557 1.0e-07 62.4 478 24.1
MD07G1306000 Malus domestica HOM05D004299 ORTHO05D003557 1.4e-07 62.0 350 26.9
Nitab4.5_0000021g0310 Nicotiana tabacum HOM05D004299 ORTHO05D003557 1.4e-07 62.0 370 25.9
Nitab4.5_0005081g0100 Nicotiana tabacum HOM05D004299 ORTHO05D003557 1.4e-07 62.0 356 26.1
Sp6g27070 Schrenkiella parvula HOM05D004299 ORTHO05D003557 1.4e-07 62.0 248 28.2
BNapus_Darmor_BZH_scaffold_162p00030 Brassica napus HOM05D004299 ORTHO05D003557 1.8e-07 61.6 503 23.3
BolC1t05844H Brassica oleracea HOM05D004299 ORTHO05D003557 1.8e-07 61.6 503 23.3
EL10Ac3g05093 Beta vulgaris HOM05D022644 ORTHO05D003557 2.3e-07 61.2 210 28.6
BolC3t13447H Brassica oleracea HOM05D004299 ORTHO05D003557 2.3e-07 61.2 357 26.6
C02p08770 Brassica napus HOM05D004299 ORTHO05D003557 3.0e-07 60.8 330 27.3
C03p60040 Brassica napus HOM05D004299 ORTHO05D003557 3.0e-07 60.8 92 47.8
BolC3t18269H Brassica oleracea HOM05D004299 ORTHO05D003557 3.0e-07 60.8 92 47.8
Aqoxy3G02070 Aquilegia oxysepala HOM05D004299 ORTHO05D003557 4.0e-07 60.5 350 26.0
Duzib128G1020 Durio zibethinus HOM05D004299 ORTHO05D003557 4.0e-07 60.5 77 51.9
COL.COLO4_06387 Corchorus olitorius HOM05D004299 ORTHO05D003557 5.2e-07 60.1 331 25.4
Duzib106G1502 Durio zibethinus HOM05D004299 ORTHO05D003557 5.2e-07 60.1 105 42.9
Gohir.D08G243500 Gossypium hirsutum HOM05D004299 ORTHO05D003557 5.2e-07 60.1 313 31.3
BraA02t05360Z Brassica rapa HOM05D004299 ORTHO05D003557 6.8e-07 59.7 461 23.9
Lsat_1_v5_gn_3_37901 Lactuca sativa HOM05D004299 ORTHO05D003557 6.8e-07 59.7 106 44.3
HanXRQChr17g0554401 Helianthus annuus HOM05D004299 ORTHO05D003557 8.9e-07 59.3 551 25.2
Nitab4.5_0000115g0360 Nicotiana tabacum HOM05D004299 ORTHO05D003557 8.9e-07 59.3 136 36.8
Hma1.2p1_0758F.1_g213620 Hydrangea macrophylla HOM05D004299 ORTHO05D003557 1.2e-06 58.9 184 28.8
Sabra19G0058100 Salix brachista HOM05D004299 ORTHO05D003557 1.2e-06 58.9 477 25.8
MSTRG.13 Avicennia marina HOM05D004299 ORTHO05D003557 1.5e-06 58.5 322 27.6
Gohir.A08G223300 Gossypium hirsutum HOM05D004299 ORTHO05D003557 1.5e-06 58.5 252 30.2
PSO478G3049 Papaver somniferum HOM05D004299 ORTHO05D003557 1.5e-06 58.5 129 36.4
TAR374G0649 Trochodendron aralioides HOM05D004299 ORTHO05D003557 1.5e-06 58.5 107 43.0
TAR374G1619 Trochodendron aralioides HOM05D004299 ORTHO05D003557 1.5e-06 58.5 107 43.0
BcaC04g18829 Brassica carinata HOM05D004299 ORTHO05D003557 2.0e-06 58.2 181 33.1
A06p26270 Brassica napus HOM05D004299 ORTHO05D003557 2.0e-06 58.2 472 24.8
BNapus_Darmor_BZH_scaffold_78p00020 Brassica napus HOM05D004299 ORTHO05D003557 2.0e-06 58.2 472 24.8
CSS0016343 Camellia sinensis var. sinensis HOM05D004299 ORTHO05D003557 2.0e-06 58.2 409 24.9
PSO017G1908 Papaver somniferum HOM05D004299 ORTHO05D003557 3.4e-06 57.4 203 30.0
Peaxi162Scf00815g00349 Petunia axillaris HOM05D004299 ORTHO05D003557 3.4e-06 57.4 368 27.7
Cc02_g00400 Coffea canephora HOM05D004299 ORTHO05D003557 5.7e-06 56.6 137 31.4
AL3G12740 Arabidopsis lyrata HOM05D004299 ORTHO05D003557 7.5e-06 56.2 247 24.3
CSS0010494 Camellia sinensis var. sinensis HOM05D004299 ORTHO05D003557 7.5e-06 56.2 449 24.9
Carub.0003s0228 Capsella rubella HOM05D004299 ORTHO05D003557 7.5e-06 56.2 234 26.5
AUR62005909 Chenopodium quinoa HOM05D022644 ORTHO05D003557 7.5e-06 56.2 403 25.1
PSO782G5567 Papaver somniferum HOM05D018639 ORTHO05D003557 7.5e-06 56.2 45 62.2
FAN03G0789 Fragaria x ananassa HOM05D012506 ORTHO05D003557 9.8e-06 55.8 320 27.2
Lj3A889G76 Lonicera japonica HOM05D004299 ORTHO05D003557 9.8e-06 55.8 332 25.6
Nn3g19291 Nelumbo nucifera HOM05D004299 ORTHO05D003557 9.8e-06 55.8 359 25.3
unitig_52.g17695 Utricularia gibba HOM05D004299 ORTHO05D003557 9.8e-06 55.8 269 29.0


User provided reference genes

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