Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0376561 Lupinus albus HOM05D003632 ORTHO05D005497 0.0e+00 1208.7 607 100.0
Lalb_Chr09g0320141 Lupinus albus HOM05D003632 ORTHO05D005497 4.9e-263 911.0 515 89.3
Glyma.01G233300 Glycine max HOM05D003632 ORTHO05D005497 2.4e-257 892.1 526 85.7
Glyma.11G009500 Glycine max HOM05D003632 ORTHO05D005497 1.2e-256 889.8 526 85.6
Phvul.002G040800 Phaseolus vulgaris HOM05D003632 ORTHO05D005497 2.9e-255 885.2 526 85.6
VMungo1215G1560 Vigna mungo HOM05D003632 ORTHO05D005497 1.5e-251 872.8 526 84.0
LjContig00222g0019593 Lotus japonicus HOM05D003632 ORTHO05D005497 1.3e-247 859.8 515 84.5
arahy.Tifrunner.gnm1.ann1.LR79EL Arachis hypogaea HOM05D003632 ORTHO05D005497 1.9e-246 855.9 526 82.3
arahy.Tifrunner.gnm1.ann1.WPQ8T0 Arachis hypogaea HOM05D003632 ORTHO05D005497 3.5e-245 851.7 526 82.1
Ca_24435_v3 Cicer arietinum L. HOM05D003632 ORTHO05D005497 1.0e-244 850.1 515 83.5
Medtr5g007380 Medicago truncatula HOM05D003632 ORTHO05D005497 1.0e-244 850.1 524 82.1
TPR.G38003 Trifolium pratense HOM05D003632 ORTHO05D005497 5.6e-243 844.3 516 83.1
Psat2g189160 Pisum sativum HOM05D003632 ORTHO05D005497 4.6e-237 824.7 524 79.8
Cfa014172 Carpinus fangiana HOM05D003632 ORTHO05D005497 5.7e-235 817.8 522 78.5
Haze_22896 Corylus avellana HOM05D003632 ORTHO05D005497 6.3e-234 814.3 522 78.5
MD00G1204700 Malus domestica HOM05D003632 ORTHO05D005497 7.7e-232 807.4 518 77.4
CiPaw.08G079400 Carya illinoinensis HOM05D003632 ORTHO05D005497 2.2e-231 805.8 522 77.8
MD00G1159400 Malus domestica HOM05D003632 ORTHO05D005497 5.0e-231 804.7 537 75.0
Ciclev10000050m.g Citrus clementina HOM05D003632 ORTHO05D005497 5.5e-230 801.2 520 78.1
FAN19G1728 Fragaria x ananassa HOM05D003632 ORTHO05D005497 7.2e-230 800.8 518 77.6
QL02p016456 Quercus lobata HOM05D003632 ORTHO05D005497 7.2e-230 800.8 522 76.8
GSVIVG01013468001 Vitis vinifera HOM05D003632 ORTHO05D005497 7.2e-230 800.8 519 76.9
RcHm_v2.0_Chr3g0491051 Rosa chinensis HOM05D003632 ORTHO05D005497 2.1e-229 799.3 537 74.7
Prupe.7G271900 Prunus persica HOM05D003632 ORTHO05D005497 3.6e-229 798.5 517 76.8
FAN23G1588 Fragaria x ananassa HOM05D003632 ORTHO05D005497 7.9e-229 797.3 518 77.2
FAN28G2113 Fragaria x ananassa HOM05D003632 ORTHO05D005497 1.4e-228 796.6 518 77.4
Duzib093G0207 Durio zibethinus HOM05D003632 ORTHO05D005497 3.9e-228 795.0 526 75.5
FvH4_1g30291 Fragaria vesca HOM05D003632 ORTHO05D005497 3.9e-228 795.0 522 76.6
Dinv03487 Davidia involucrata HOM05D003632 ORTHO05D005497 5.1e-228 794.7 525 76.4
Atru.chr13.15 Acer truncatum HOM05D003632 ORTHO05D005497 2.5e-227 792.3 518 77.2
Gorai.002G111600 Gossypium raimondii HOM05D003632 ORTHO05D005497 3.3e-227 792.0 528 75.4
Potri.014G149200 Populus trichocarpa HOM05D003632 ORTHO05D005497 4.3e-227 791.6 524 76.0
CSS0037547 Camellia sinensis var. sinensis HOM05D003632 ORTHO05D005497 9.7e-227 790.4 521 76.2
Potri.002G235700 Populus trichocarpa HOM05D003632 ORTHO05D005497 1.3e-226 790.0 533 74.7
Gohir.A01G101300 Gossypium hirsutum HOM05D003632 ORTHO05D005497 4.8e-226 788.1 534 74.2
Duzib248G0791 Durio zibethinus HOM05D003632 ORTHO05D005497 6.3e-226 787.7 526 75.5
FvH4_7g03800 Fragaria vesca HOM05D003632 ORTHO05D005497 6.3e-226 787.7 513 77.2
Gohir.D01G086200 Gossypium hirsutum HOM05D003632 ORTHO05D005497 6.3e-226 787.7 528 75.0
TWI63G1168 Tripterygium wilfordii HOM05D003632 ORTHO05D005497 8.2e-226 787.3 520 75.2
TWI38G0156 Tripterygium wilfordii HOM05D003632 ORTHO05D005497 3.1e-225 785.4 520 76.0
TAR381G0543 Trochodendron aralioides HOM05D003632 ORTHO05D005497 3.1e-225 785.4 521 75.2
CANSAT25G0240 Cannabis sativa HOM05D003632 ORTHO05D005497 5.3e-225 784.6 523 76.3
Manes.05G198000 Manihot esculenta HOM05D003632 ORTHO05D005497 9.1e-225 783.9 520 75.8
Thecc.08G097100 Theobroma cacao HOM05D003632 ORTHO05D005497 7.7e-224 780.8 516 75.8
Eucgr.F03633 Eucalyptus grandis HOM05D003632 ORTHO05D005497 1.3e-223 780.0 519 75.3
Nn6g31540 Nelumbo nucifera HOM05D003632 ORTHO05D005497 1.6e-221 773.1 520 73.7
Ah.11g049790 Amaranthus hybridus HOM05D003632 ORTHO05D005497 5.1e-220 768.1 533 72.0
COL.COLO4_04620 Corchorus olitorius HOM05D003632 ORTHO05D005497 5.7e-219 764.6 565 69.4
Rhsim02G0142400 Rhododendron simsii HOM05D003632 ORTHO05D005497 3.7e-218 761.9 516 73.6
Actinidia15538 Actinidia chinensis HOM05D003632 ORTHO05D005497 6.3e-218 761.1 537 71.3
PGSC0003DMG400014254 Solanum tuberosum HOM05D003632 ORTHO05D005497 8.2e-218 760.8 515 73.4
Cc04_g05970 Coffea canephora HOM05D003632 ORTHO05D005497 1.1e-217 760.4 522 71.8
PGR031G0531 Punica granatum HOM05D003632 ORTHO05D005497 2.4e-217 759.2 532 72.0
Sabra14G0112500 Salix brachista HOM05D003632 ORTHO05D005497 3.1e-217 758.8 576 67.9
CANSAT01G2380 Cannabis sativa HOM05D003632 ORTHO05D005497 5.3e-217 758.1 513 74.5
Sc17g0000620 Simmondsia chinensis HOM05D003632 ORTHO05D005497 5.3e-217 758.1 518 73.9
Sopen03g037320 Solanum pennellii HOM05D003632 ORTHO05D005497 7.0e-217 757.7 515 73.6
AUR62011864 Chenopodium quinoa HOM05D003632 ORTHO05D005497 9.1e-217 757.3 518 75.7
Solyc03g118430.3 Solanum lycopersicum HOM05D003632 ORTHO05D005497 1.2e-216 756.9 515 72.8
MELO3C008771.2 Cucumis melo HOM05D003632 ORTHO05D005497 2.6e-216 755.7 513 73.5
PSO541G6510 Papaver somniferum HOM05D003632 ORTHO05D005497 2.6e-216 755.7 520 72.1
Nitab4.5_0002046g0120 Nicotiana tabacum HOM05D003632 ORTHO05D005497 3.5e-216 755.4 515 73.0
THA.LOC104806863 Tarenaya hassleriana HOM05D003632 ORTHO05D005497 3.5e-216 755.4 530 72.5
AUR62024707 Chenopodium quinoa HOM05D003632 ORTHO05D005497 5.9e-216 754.6 519 74.6
PSO675G5232 Papaver somniferum HOM05D003632 ORTHO05D005497 5.9e-216 754.6 520 72.3
ATR0605G213 Amborella trichopoda HOM05D003632 ORTHO05D005497 1.3e-215 753.4 534 69.9
CsaV3_2G009400 Cucumis sativus L. HOM05D003632 ORTHO05D005497 3.8e-215 751.9 514 73.3
Migut.D01195 Erythranthe guttata HOM05D003632 ORTHO05D005497 1.9e-214 749.6 519 72.3
MSTRG.9366 Avicennia marina HOM05D003632 ORTHO05D005497 2.5e-214 749.2 532 69.5
PSO017G4161 Papaver somniferum HOM05D003632 ORTHO05D005497 2.5e-214 749.2 518 72.8
PSO170G0589 Papaver somniferum HOM05D003632 ORTHO05D005497 4.2e-214 748.4 518 72.6
Peaxi162Scf00314g00434 Petunia axillaris HOM05D003632 ORTHO05D005497 5.5e-214 748.0 532 70.9
Nitab4.5_0002450g0120 Nicotiana tabacum HOM05D003632 ORTHO05D005497 7.2e-214 747.7 522 72.2
Aa31LG9G12540 Aethionema arabicum HOM05D003632 ORTHO05D005497 1.6e-213 746.5 531 72.1
EL10As5g23474 Beta vulgaris HOM05D003632 ORTHO05D005497 2.1e-213 746.1 545 70.6
Carub.0008s0677 Capsella rubella HOM05D003632 ORTHO05D005497 3.6e-213 745.3 529 71.8
Sp7g08050 Schrenkiella parvula HOM05D003632 ORTHO05D005497 6.1e-213 744.6 529 71.1
Sed0011503 Sechium edule HOM05D003632 ORTHO05D005497 6.1e-213 744.6 512 73.4
AT5G42390 Arabidopsis thaliana HOM05D003632 ORTHO05D005497 1.0e-212 743.8 529 71.1
Thhalv10003133m.g Eutrema salsugineum HOM05D003632 ORTHO05D005497 1.0e-212 743.8 535 70.3
Aqoxy5G00932 Aquilegia oxysepala HOM05D003632 ORTHO05D005497 2.3e-212 742.7 539 70.1
THA.LOC104813211 Tarenaya hassleriana HOM05D003632 ORTHO05D005497 3.0e-212 742.3 531 71.9
ECA236G2986 Erigeron canadensis HOM05D003632 ORTHO05D005497 8.8e-212 740.7 520 71.0
AL8G19100 Arabidopsis lyrata HOM05D003632 ORTHO05D005497 2.0e-211 739.6 529 71.3
BcaC04g21997 Brassica carinata HOM05D003632 ORTHO05D005497 2.6e-211 739.2 529 70.7
C09p25020 Brassica napus HOM05D003632 ORTHO05D005497 2.6e-211 739.2 529 70.7
A09p19660 Brassica napus HOM05D003632 ORTHO05D005497 7.4e-211 737.6 529 70.3
CDE06G0366 Ceratophyllum demersum HOM05D003632 ORTHO05D005497 9.7e-211 737.3 519 70.5
DCAR_003535 Daucus carota HOM05D003632 ORTHO05D005497 9.7e-211 737.3 517 70.8
Hund02917 Selenicereus undatus HOM05D003632 ORTHO05D005497 1.3e-210 736.9 519 71.5
Oeu015114.3 Olea europaea HOM05D003632 ORTHO05D005497 1.7e-210 736.5 613 62.6
FAN03G3001 Fragaria x ananassa HOM05D003632 ORTHO05D005497 2.2e-210 736.1 518 72.8
unitig_0.g345 Utricularia gibba HOM05D003632 ORTHO05D005497 3.7e-210 735.3 508 72.2
MBI01_g09379_MAGBIO Magnolia biondii HOM05D003632 ORTHO05D005497 6.3e-210 734.6 538 69.0
CARHR285100 Cardamine hirsuta HOM05D003632 ORTHO05D005497 1.8e-209 733.0 529 71.1
Lj5C162T4 Lonicera japonica HOM05D003632 ORTHO05D005497 5.3e-209 731.5 537 69.3
HanXRQChr04g0119021 Helianthus annuus HOM05D003632 ORTHO05D005497 4.2e-206 721.8 519 69.6
Zm00001eb275640 Zea mays HOM05D003632 ORTHO05D005497 2.1e-205 719.5 512 69.3
Os06g0625400 Oryza sativa ssp. japonica HOM05D003632 ORTHO05D005497 3.6e-205 718.8 515 69.7
HanXRQChr15g0481001 Helianthus annuus HOM05D003632 ORTHO05D005497 6.1e-205 718.0 541 66.5
Zm00001eb387800 Zea mays HOM05D003632 ORTHO05D005497 1.0e-204 717.2 512 69.5
BolC9t55396H Brassica oleracea HOM05D003632 ORTHO05D005497 1.8e-204 716.5 529 69.2
BraA09t37577Z Brassica rapa HOM05D003632 ORTHO05D005497 2.3e-204 716.1 529 69.0
Lsat_1_v5_gn_7_31540 Lactuca sativa HOM05D003632 ORTHO05D005497 9.7e-203 710.7 515 69.3
CDE07G1872 Ceratophyllum demersum HOM05D003632 ORTHO05D005497 1.4e-201 706.8 519 69.4
SHI18575 Sapria himalayana HOM05D003632 ORTHO05D005497 3.5e-184 649.0 522 63.8
SalBow1G1353 Salvia bowleyana HOM05D003632 ORTHO05D005497 1.5e-179 633.6 520 63.3
BcaNung05247 Brassica carinata HOM05D003632 ORTHO05D005497 8.0e-173 611.3 433 71.6
Mapoly0022s0090 Marchantia polymorpha HOM05D003632 ORTHO05D005497 2.0e-171 606.7 538 56.5
Pp3c16_2100 Physcomitrium patens HOM05D003632 ORTHO05D005497 4.6e-168 595.5 523 57.7
HPP92_022034 Vanilla planifolia HOM05D003632 ORTHO05D005497 4.6e-168 595.5 523 59.3
CBR_g32249 Chara braunii HOM05D003632 ORTHO05D005497 4.4e-147 525.8 621 46.5
CAN.G843.30 Capsicum annuum HOM05D003632 ORTHO05D005497 5.8e-147 525.4 375 69.9
vmacro15971 Vaccinium macrocarpon HOM05D003632 ORTHO05D005497 2.1e-144 516.9 363 70.8
SMO117G0011 Selaginella moellendorffii HOM05D003632 ORTHO05D005497 1.8e-140 503.8 524 50.4
AagrBONN_evm.TU.Sc2ySwM_117.2840 Anthoceros agrestis HOM05D003632 ORTHO05D005497 5.8e-139 498.8 480 54.8
Rhsim09G0100400 Rhododendron simsii HOM05D003632 ORTHO05D005497 9.0e-132 474.9 338 69.5
Cpa.g.sc36.89 Carica papaya HOM05D003632 ORTHO05D005497 6.4e-130 468.8 520 51.7
BcaB07g31078 Brassica carinata HOM05D003632 ORTHO05D005497 3.9e-127 459.5 340 67.9
Cre17.g723250 Chlamydomonas reinhardtii HOM05D003632 ORTHO05D005497 8.5e-114 415.2 511 43.6
CAN.G2827.1 Capsicum annuum HOM05D003632 ORTHO05D005497 7.7e-107 392.1 317 63.4
PRCOL_00001043 Prasinoderma coloniale HOM05D003632 ORTHO05D005497 2.1e-104 384.0 541 39.7
CAN.G2827.2 Capsicum annuum HOM05D003632 ORTHO05D005497 3.0e-95 353.6 230 76.5
SEGI_09953 Sequoiadendron giganteum HOM05D003632 ORTHO05D005497 1.6e-83 314.7 241 63.1
CAN.G1425.12 Capsicum annuum HOM05D003632 ORTHO05D005497 6.5e-82 309.3 230 69.1
MCO10G275 Micromonas commoda HOM05D003632 ORTHO05D005497 1.2e-80 305.1 557 34.6
BcaB07g31079 Brassica carinata HOM05D003632 ORTHO05D005497 5.2e-63 246.5 166 74.1
Hma1.2p1_0471F.1_g159520 Hydrangea macrophylla HOM05D003632 ORTHO05D005497 9.8e-54 215.7 154 70.8
FAN28G2388 Fragaria x ananassa HOM05D003632 ORTHO05D017240 1.6e-48 198.4 151 68.9
CAN.G1425.13 Capsicum annuum HOM05D003632 ORTHO05D005497 2.1e-48 198.0 300 40.0
SEGI_17718 Sequoiadendron giganteum HOM05D003632 ORTHO05D005497 1.5e-46 191.8 152 64.5
FAN26G0913 Fragaria x ananassa HOM05D003632 ORTHO05D005497 2.9e-45 187.6 188 56.4
CAN.G843.29 Capsicum annuum HOM05D003632 ORTHO05D005497 3.7e-45 187.2 130 70.8
FAN26G0474 Fragaria x ananassa HOM05D003632 ORTHO05D017240 1.9e-41 174.9 161 60.2
FAN28G1390 Fragaria x ananassa HOM05D003632 ORTHO05D017240 1.2e-38 165.6 161 57.8
Rhsim02G0141400 Rhododendron simsii HOM05D003632 ORTHO05D005497 4.4e-38 163.7 189 47.6
FAN10G0430 Fragaria x ananassa HOM05D003632 ORTHO05D005497 1.3e-34 152.1 129 61.2
FAN10G0294 Fragaria x ananassa HOM05D003632 ORTHO05D005497 1.6e-32 145.2 109 67.0
FvH4_7g05210 Fragaria vesca HOM05D003632 ORTHO05D017240 2.1e-32 144.8 107 72.0
FAN06G1370 Fragaria x ananassa HOM05D006280 ORTHO05D007876 3.6e-32 144.1 120 61.7
FAN06G1218 Fragaria x ananassa HOM05D003632 ORTHO05D005497 4.0e-31 140.6 104 67.3
Oeu015113.1 Olea europaea HOM05D003632 ORTHO05D005497 3.9e-26 124.0 66 87.9
FAN28G0698 Fragaria x ananassa HOM05D003632 ORTHO05D017240 5.1e-26 123.6 120 55.8
FAN23G2090 Fragaria x ananassa HOM05D003632 ORTHO05D005497 1.3e-24 119.0 99 63.6
Aa31LG9G5100 Aethionema arabicum HOM05D003632 ORTHO05D005497 4.5e-22 110.5 62 83.9
FAN06G4184 Fragaria x ananassa HOM05D003632 ORTHO05D005497 1.7e-21 108.6 107 59.8
FAN03G2152 Fragaria x ananassa HOM05D003632 ORTHO05D005497 1.1e-20 105.9 90 63.3
FvH4_7g01540 Fragaria vesca HOM05D003632 ORTHO05D005497 2.5e-17 94.7 107 51.4
FvH4_1g28270 Fragaria vesca HOM05D003632 ORTHO05D005497 7.4e-17 93.2 91 62.6
FvH4_1g30300 Fragaria vesca HOM05D003632 ORTHO05D005497 1.1e-15 89.4 52 84.6
FAN19G0570 Fragaria x ananassa HOM05D003632 ORTHO05D005497 6.9e-15 86.7 92 56.5
FAN06G3471 Fragaria x ananassa HOM05D003632 ORTHO05D017240 1.5e-14 85.5 61 72.1
FvH4_7g02670 Fragaria vesca HOM05D003632 ORTHO05D017240 6.5e-13 80.1 60 68.3
FvH4_7g00590 Fragaria vesca HOM05D003632 ORTHO05D046112 1.1e-12 79.3 154 35.7
CAN.G962.8 Capsicum annuum HOM05D003632 ORTHO05D001064 1.4e-12 79.0 49 77.6
FAN10G1660 Fragaria x ananassa HOM05D003632 ORTHO05D046112 1.9e-12 78.6 50 74.0
FvH4_7g00770 Fragaria vesca HOM05D003632 ORTHO05D002531 6.0e-11 73.6 58 60.3
FAN03G0989 Fragaria x ananassa HOM05D003632 ORTHO05D005497 8.7e-10 69.7 141 33.3
FAN10G3171 Fragaria x ananassa HOM05D003632 ORTHO05D005497 1.6e-08 65.5 49 69.4
FAN06G0859 Fragaria x ananassa HOM05D003632 ORTHO05D046128 4.8e-08 63.9 65 55.4
Aa31LG2G1380 Aethionema arabicum HOM05D003632 ORTHO05D017240 9.0e-07 59.7 49 63.3
FvH4_7g01860 Fragaria vesca HOM05D003632 ORTHO05D046128 3.4e-06 57.8 52 61.5
SEGI_24244 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 7.6e-06 56.6 64 37.5


User provided reference genes

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