Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0376281 Lupinus albus HOM05D005641 ORTHO05D007953 3.8e-30 134.0 61 100.0
Glyma.01G243000 Glycine max HOM05D005641 ORTHO05D007953 8.7e-19 96.3 57 77.2
arahy.Tifrunner.gnm1.ann1.C5GEYC Arachis hypogaea HOM05D005641 ORTHO05D007953 5.3e-16 87.0 46 82.6
arahy.Tifrunner.gnm1.ann1.GRNJ5W Arachis hypogaea HOM05D005641 ORTHO05D007953 5.3e-16 87.0 46 82.6
Lj1g0011960 Lotus japonicus HOM05D005641 ORTHO05D007953 6.9e-16 86.7 56 71.4
Rhsim05G0090100 Rhododendron simsii HOM05D005641 ORTHO05D007953 9.0e-16 86.3 56 66.1
vmacro19527 Vaccinium macrocarpon HOM05D005641 ORTHO05D007953 9.0e-16 86.3 56 66.1
FvH4_2g04060 Fragaria vesca HOM05D005641 ORTHO05D007953 2.0e-15 85.1 56 66.1
FAN24G2036 Fragaria x ananassa HOM05D005641 ORTHO05D007953 2.0e-15 85.1 56 66.1
Cpa.g.sc106.73 Carica papaya HOM05D005641 ORTHO05D007953 4.5e-15 84.0 56 66.1
FAN20G2714 Fragaria x ananassa HOM05D005641 ORTHO05D007953 4.5e-15 84.0 56 64.3
Phvul.002G052300 Phaseolus vulgaris HOM05D005641 ORTHO05D007953 5.9e-15 83.6 56 66.1
ECA240G0483 Erigeron canadensis HOM05D005641 ORTHO05D007953 7.7e-15 83.2 56 62.5
HanXRQChr03g0069981 Helianthus annuus HOM05D005641 ORTHO05D007953 7.7e-15 83.2 56 62.5
MD05G1097100 Malus domestica HOM05D005641 ORTHO05D007953 7.7e-15 83.2 56 62.5
Cc02_g19690 Coffea canephora HOM05D005641 ORTHO05D007953 1.0e-14 82.8 56 60.7
MELO3C017992.2 Cucumis melo HOM05D005641 ORTHO05D007953 1.7e-14 82.0 56 62.5
CsaV3_4G000430 Cucumis sativus L. HOM05D005641 ORTHO05D007953 1.7e-14 82.0 56 62.5
FAN15G3008 Fragaria x ananassa HOM05D005641 ORTHO05D007953 1.7e-14 82.0 56 64.3
CDE06G0500 Ceratophyllum demersum HOM05D005641 ORTHO05D007953 2.2e-14 81.6 56 64.3
Actinidia27984 Actinidia chinensis HOM05D005641 ORTHO05D007953 2.9e-14 81.3 56 64.3
DCAR_029115 Daucus carota HOM05D005641 ORTHO05D007953 2.9e-14 81.3 56 62.5
QL02p069388 Quercus lobata HOM05D005641 ORTHO05D007953 2.9e-14 81.3 56 62.5
Prupe.8G141700 Prunus persica HOM05D005641 ORTHO05D007953 3.8e-14 80.9 56 62.5
TPR.G8292 Trifolium pratense HOM05D005641 ORTHO05D007953 3.8e-14 80.9 57 66.7
Psat4g227920 Pisum sativum HOM05D005641 ORTHO05D007953 6.5e-14 80.1 56 64.3
Cfa004645 Carpinus fangiana HOM05D005641 ORTHO05D007953 8.5e-14 79.7 56 60.7
Haze_10242 Corylus avellana HOM05D005641 ORTHO05D007953 8.5e-14 79.7 56 60.7
Dinv42223 Davidia involucrata HOM05D005641 ORTHO05D007953 8.5e-14 79.7 56 60.7
RcHm_v2.0_Chr6g0253411 Rosa chinensis HOM05D005641 ORTHO05D007953 8.5e-14 79.7 56 64.3
CSS0033790 Camellia sinensis var. sinensis HOM05D005641 ORTHO05D007953 1.1e-13 79.3 54 64.8
FAN27G3103 Fragaria x ananassa HOM05D005641 ORTHO05D007953 1.1e-13 79.3 59 62.7
Oeu037265.1 Olea europaea HOM05D005641 ORTHO05D007953 1.1e-13 79.3 54 66.7
Eucgr.G01263 Eucalyptus grandis HOM05D005641 ORTHO05D007953 1.4e-13 79.0 56 57.1
Manes.10G080400 Manihot esculenta HOM05D005641 ORTHO05D007953 1.4e-13 79.0 57 63.2
Aqoxy6G02714 Aquilegia oxysepala HOM05D005641 ORTHO05D007953 2.5e-13 78.2 56 60.7
Hma1.2p1_1023F.1_g248880 Hydrangea macrophylla HOM05D005641 ORTHO05D007953 2.5e-13 78.2 56 58.9
Hma1.2p1_1023F.1_g248890 Hydrangea macrophylla HOM05D005641 ORTHO05D007953 2.5e-13 78.2 56 58.9
Medtr5g005150 Medicago truncatula HOM05D005641 ORTHO05D007953 2.5e-13 78.2 56 62.5
Zm00001eb137960 Zea mays HOM05D005641 ORTHO05D007953 3.2e-13 77.8 56 64.3
Lj9A326T80 Lonicera japonica HOM05D005641 ORTHO05D007953 4.2e-13 77.4 56 58.9
SEGI_20221 Sequoiadendron giganteum HOM05D005641 ORTHO05D007953 4.2e-13 77.4 56 60.7
SEGI_25796 Sequoiadendron giganteum HOM05D005641 ORTHO05D007953 4.2e-13 77.4 56 60.7
Thecc.02G114700 Theobroma cacao HOM05D005641 ORTHO05D007953 4.2e-13 77.4 56 57.1
Sc14g0002550 Simmondsia chinensis HOM05D005641 ORTHO05D007953 5.5e-13 77.0 56 60.7
CSS0039741 Camellia sinensis var. sinensis HOM05D005641 ORTHO05D007953 7.2e-13 76.6 54 63.0
AUR62022504 Chenopodium quinoa HOM05D005641 ORTHO05D007953 7.2e-13 76.6 56 60.7
Eucgr.G01266 Eucalyptus grandis HOM05D005641 ORTHO05D007953 7.2e-13 76.6 56 53.6
TAR376G1148 Trochodendron aralioides HOM05D005641 ORTHO05D007953 7.2e-13 76.6 54 64.8
Carub.0003s2882 Capsella rubella HOM05D005641 ORTHO05D007953 9.4e-13 76.3 56 58.9
Gohir.A03G183900 Gossypium hirsutum HOM05D005641 ORTHO05D007953 9.4e-13 76.3 56 58.9
Gohir.D02G205400 Gossypium hirsutum HOM05D005641 ORTHO05D007953 9.4e-13 76.3 56 58.9
Gorai.005G232800 Gossypium raimondii HOM05D005641 ORTHO05D007953 9.4e-13 76.3 56 58.9
Sabra09G0069700 Salix brachista HOM05D005641 ORTHO05D007953 9.4e-13 76.3 47 66.0
Sp3g28020 Schrenkiella parvula HOM05D005641 ORTHO05D007953 9.4e-13 76.3 56 58.9
PSO541G1794 Papaver somniferum HOM05D005641 ORTHO05D007953 1.2e-12 75.9 56 57.1
PSO675G2895 Papaver somniferum HOM05D005641 ORTHO05D007953 1.2e-12 75.9 56 58.9
TWI14G0306 Tripterygium wilfordii HOM05D005641 ORTHO05D007953 1.2e-12 75.9 56 58.9
Aa31LG8G12890 Aethionema arabicum HOM05D005641 ORTHO05D007953 1.6e-12 75.5 57 61.4
AL3G46570 Arabidopsis lyrata HOM05D005641 ORTHO05D007953 1.6e-12 75.5 56 58.9
AT2G14825 Arabidopsis thaliana HOM05D005641 ORTHO05D007953 1.6e-12 75.5 56 58.9
AUR62031337 Chenopodium quinoa HOM05D005641 ORTHO05D007953 1.6e-12 75.5 56 60.7
PGR042G1829 Punica granatum HOM05D005641 ORTHO05D007953 1.6e-12 75.5 56 57.1
unitig_744.g24456 Utricularia gibba HOM05D005641 ORTHO05D007953 1.6e-12 75.5 56 60.7
GSVIVG01037858001 Vitis vinifera HOM05D005641 ORTHO05D007953 1.6e-12 75.5 56 58.9
Ah.09g231980 Amaranthus hybridus HOM05D005641 ORTHO05D007953 2.1e-12 75.1 56 57.1
BcaC04g23064 Brassica carinata HOM05D005641 ORTHO05D007953 2.1e-12 75.1 56 58.9
BolC9t54144H Brassica oleracea HOM05D005641 ORTHO05D007953 2.1e-12 75.1 56 58.9
CiPaw.06G166900 Carya illinoinensis HOM05D005641 ORTHO05D007953 2.1e-12 75.1 56 55.4
Ca_24352_v3 Cicer arietinum L. HOM05D005641 ORTHO05D007953 2.1e-12 75.1 56 60.7
Thhalv10022899m.g Eutrema salsugineum HOM05D005641 ORTHO05D007953 2.1e-12 75.1 56 58.9
Os12g0508266 Oryza sativa ssp. japonica HOM05D005641 ORTHO05D007953 2.1e-12 75.1 56 57.1
A09p10560 Brassica napus HOM05D005641 ORTHO05D007953 2.7e-12 74.7 56 57.1
BraA09t36698Z Brassica rapa HOM05D005641 ORTHO05D007953 2.7e-12 74.7 56 57.1
SGA_v2.0_scaffold337G49200 Striga asiatica HOM05D005641 ORTHO05D007953 2.7e-12 74.7 57 59.6
Atru.chr5.2402 Acer truncatum HOM05D005641 ORTHO05D007953 3.6e-12 74.3 56 55.4
EL10Ac8g19366 Beta vulgaris HOM05D005641 ORTHO05D007953 3.6e-12 74.3 56 58.9
Migut.O00678 Erythranthe guttata HOM05D005641 ORTHO05D007953 3.6e-12 74.3 56 62.5
CANSAT25G1977 Cannabis sativa HOM05D005641 ORTHO05D007953 4.6e-12 73.9 56 57.1
CARHR284800 Cardamine hirsuta HOM05D005641 ORTHO05D007953 4.6e-12 73.9 56 57.1
Ciclev10029502m.g Citrus clementina HOM05D005641 ORTHO05D007953 4.6e-12 73.9 56 58.9
Migut.N01150 Erythranthe guttata HOM05D005641 ORTHO05D007953 4.6e-12 73.9 56 62.5
COL.COLO4_32537 Corchorus olitorius HOM05D005641 ORTHO05D007953 6.1e-12 73.6 56 55.4
C09p12490 Brassica napus HOM05D005641 ORTHO05D007953 7.9e-12 73.2 56 55.4
Sed0000346 Sechium edule HOM05D005641 ORTHO05D007953 7.9e-12 73.2 56 57.1
Nn1g04606 Nelumbo nucifera HOM05D005641 ORTHO05D007953 1.4e-11 72.4 56 55.4
THA.LOC104819534 Tarenaya hassleriana HOM05D005641 ORTHO05D007953 1.4e-11 72.4 56 58.9
Hund12610 Selenicereus undatus HOM05D005641 ORTHO05D007953 3.0e-11 71.2 56 58.9
Potri.009G090100 Populus trichocarpa HOM05D005641 ORTHO05D007953 3.9e-11 70.9 56 51.8
SalBow3G4250 Salvia bowleyana HOM05D005641 ORTHO05D007953 3.9e-11 70.9 56 57.1
Duzib052G0024 Durio zibethinus HOM05D005641 ORTHO05D007953 6.7e-11 70.1 56 53.6
VMungo1215G0158 Vigna mungo HOM05D005641 ORTHO05D007953 6.7e-11 70.1 46 63.0
QL02p069415 Quercus lobata HOM05D000030 ORTHO05D000009 2.0e-10 68.6 51 54.9
Lsat_1_v5_gn_9_112460 Lactuca sativa HOM05D005641 ORTHO05D007953 2.6e-10 68.2 56 53.6
MSTRG.5328 Avicennia marina HOM05D005641 ORTHO05D007953 3.3e-10 67.8 56 53.6
Hma1.2p1_1023F.1_g248900 Hydrangea macrophylla HOM05D005641 ORTHO05D007953 7.4e-10 66.6 50 58.0
Nitab4.5_0012285g0030 Nicotiana tabacum HOM05D005641 ORTHO05D007953 7.4e-10 66.6 54 57.4
Sopen10g020870 Solanum pennellii HOM05D005641 ORTHO05D007953 9.7e-10 66.2 54 57.4
HPP92_020459 Vanilla planifolia HOM05D005641 ORTHO05D007953 9.7e-10 66.2 54 53.7
PGSC0003DMG400005454 Solanum tuberosum HOM05D005641 ORTHO05D007953 1.7e-09 65.5 56 53.6
Peaxi162Scf00083g00163 Petunia axillaris HOM05D005641 ORTHO05D007953 2.2e-09 65.1 55 49.1
HPP92_026175 Vanilla planifolia HOM05D005641 ORTHO05D007953 2.2e-09 65.1 54 53.7
CAN.G1.68 Capsicum annuum HOM05D005641 ORTHO05D007953 2.8e-09 64.7 56 51.8
Solyc10g049650.3 Solanum lycopersicum HOM05D005641 ORTHO05D007953 2.8e-09 64.7 54 55.6
Ciclev10028542m.g Citrus clementina HOM05D005641 ORTHO05D007953 1.8e-08 62.0 54 53.7
ClCG10G010510 Citrullus lanatus HOM05D005641 ORTHO05D007953 2.4e-08 61.6 38 65.8
Nitab4.5_0001259g0120 Nicotiana tabacum HOM05D005641 ORTHO05D007953 1.5e-07 58.9 50 54.0
Zm00001eb264710 Zea mays HOM05D005641 ORTHO05D007953 1.5e-07 58.9 41 65.9
Pp3c6_20250 Physcomitrium patens HOM05D005641 ORTHO05D007953 2.6e-07 58.2 56 46.4
SMO119G0506 Selaginella moellendorffii HOM05D005641 ORTHO05D007953 2.6e-07 58.2 56 48.2
Peaxi162Scf00003g02633 Petunia axillaris HOM05D005641 ORTHO05D007953 1.0e-06 56.2 39 59.0
PGR042G3728 Punica granatum HOM05D005641 ORTHO05D007953 1.7e-06 55.5 50 48.0
Cfa004644 Carpinus fangiana HOM05D005641 ORTHO05D002074 6.5e-06 53.5 38 57.9


User provided reference genes

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