Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr15g0089711 Lupinus albus HOM05D003630 ORTHO05D004151 5.5e-54 214.2 116 100.0
Lalb_Chr18g0059451 Lupinus albus HOM05D003630 ORTHO05D004151 1.9e-46 189.1 117 88.9
Lj6g0013661 Lotus japonicus HOM05D003630 ORTHO05D004151 3.6e-45 184.9 113 84.1
arahy.Tifrunner.gnm1.ann1.H8XLFU Arachis hypogaea HOM05D003630 ORTHO05D004151 3.0e-44 181.8 113 83.2
arahy.Tifrunner.gnm1.ann1.S1G93A Arachis hypogaea HOM05D003630 ORTHO05D004151 3.0e-44 181.8 113 83.2
Phvul.006G183600 Phaseolus vulgaris HOM05D003630 ORTHO05D004151 2.0e-43 179.1 113 85.0
VMungo0540G1118 Vigna mungo HOM05D003630 ORTHO05D004151 7.4e-43 177.2 113 85.0
Duzib160G0312 Durio zibethinus HOM05D003630 ORTHO05D004151 3.4e-40 168.3 119 79.0
Ca_00350_v3 Cicer arietinum L. HOM05D003630 ORTHO05D004151 6.5e-39 164.1 113 76.1
TWI38G1513 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 3.2e-38 161.8 120 78.3
Cpa.g.sc373.3 Carica papaya HOM05D003630 ORTHO05D004151 1.2e-37 159.8 117 76.9
Glyma.13G237000 Glycine max HOM05D003630 ORTHO05D004151 2.7e-37 158.7 113 79.6
Gohir.A05G159800 Gossypium hirsutum HOM05D003630 ORTHO05D004151 2.3e-36 155.6 116 65.5
TPR.G16501 Trifolium pratense HOM05D003630 ORTHO05D004151 2.3e-36 155.6 114 75.4
Medtr2g014240 Medicago truncatula HOM05D003630 ORTHO05D004151 3.0e-36 155.2 114 74.6
Nn1g04163 Nelumbo nucifera HOM05D003630 ORTHO05D004151 5.1e-36 154.5 117 75.2
CiPaw.09G062300 Carya illinoinensis HOM05D003630 ORTHO05D004151 6.7e-36 154.1 118 72.9
Gohir.D05G162500 Gossypium hirsutum HOM05D003630 ORTHO05D004151 6.7e-36 154.1 116 64.7
CiPaw.10G051200 Carya illinoinensis HOM05D003630 ORTHO05D004151 8.8e-36 153.7 118 73.7
ClCG01G023140 Citrullus lanatus HOM05D003630 ORTHO05D004151 2.6e-35 152.1 117 70.9
Sed0017838 Sechium edule HOM05D003630 ORTHO05D004151 2.6e-35 152.1 117 73.5
arahy.Tifrunner.gnm1.ann1.Q5B35H Arachis hypogaea HOM05D003630 ORTHO05D004151 3.3e-35 151.8 120 70.8
Thecc.06G183500 Theobroma cacao HOM05D003630 ORTHO05D004151 3.3e-35 151.8 106 83.0
Glyma.15G076500 Glycine max HOM05D003630 ORTHO05D004151 5.7e-35 151.0 114 76.3
RcHm_v2.0_Chr5g0008921 Rosa chinensis HOM05D003630 ORTHO05D004151 9.7e-35 150.2 119 72.3
Sed0001316 Sechium edule HOM05D003630 ORTHO05D004151 9.7e-35 150.2 113 63.7
GSVIVG01021092001 Vitis vinifera HOM05D003630 ORTHO05D004151 1.3e-34 149.8 121 74.4
Actinidia07592 Actinidia chinensis HOM05D003630 ORTHO05D004151 1.7e-34 149.4 119 73.9
Manes.17G047900 Manihot esculenta HOM05D003630 ORTHO05D004151 1.7e-34 149.4 115 73.0
CsaV3_6G050280 Cucumis sativus L. HOM05D003630 ORTHO05D004151 4.8e-34 147.9 117 70.9
Dinv17335 Davidia involucrata HOM05D003630 ORTHO05D004151 8.2e-34 147.1 123 69.1
Sed0024812 Sechium edule HOM05D003630 ORTHO05D004151 8.2e-34 147.1 115 68.7
arahy.Tifrunner.gnm1.ann1.RY2Y1Z Arachis hypogaea HOM05D003630 ORTHO05D004151 2.4e-33 145.6 120 69.2
CsaV3_1G012460 Cucumis sativus L. HOM05D003630 ORTHO05D004151 3.1e-33 145.2 113 66.4
FvH4_3g08830 Fragaria vesca HOM05D003630 ORTHO05D004151 3.1e-33 145.2 118 71.2
FAN11G3953 Fragaria x ananassa HOM05D003630 ORTHO05D004151 3.1e-33 145.2 118 71.2
ClCG03G008090 Citrullus lanatus HOM05D003630 ORTHO05D004151 7.0e-33 144.1 113 65.5
QL05p041782 Quercus lobata HOM05D003630 ORTHO05D004151 7.0e-33 144.1 121 67.8
Lalb_Chr09g0327781 Lupinus albus HOM05D003630 ORTHO05D004151 9.1e-33 143.7 118 65.3
Psat1g203680 Pisum sativum HOM05D003630 ORTHO05D004151 1.2e-32 143.3 103 74.8
MELO3C002620.2 Cucumis melo HOM05D003630 ORTHO05D004151 1.5e-32 142.9 113 65.5
Hma1.2p1_0208F.1_g088370 Hydrangea macrophylla HOM05D003630 ORTHO05D004151 1.5e-32 142.9 122 67.2
ATR0752G193 Amborella trichopoda HOM05D003630 ORTHO05D004151 2.0e-32 142.5 121 63.6
Cc02_g13650 Coffea canephora HOM05D003630 ORTHO05D004151 2.0e-32 142.5 122 67.2
FAN21G0750 Fragaria x ananassa HOM05D003630 ORTHO05D004151 3.5e-32 141.7 118 69.5
TAR626G1897 Trochodendron aralioides HOM05D003630 ORTHO05D004151 3.5e-32 141.7 117 70.1
FAN16G2355 Fragaria x ananassa HOM05D003630 ORTHO05D004151 4.5e-32 141.4 118 67.8
FAN25G0655 Fragaria x ananassa HOM05D003630 ORTHO05D004151 4.5e-32 141.4 118 67.8
Gohir.A06G129700 Gossypium hirsutum HOM05D003630 ORTHO05D004151 5.9e-32 141.0 120 70.0
Gohir.D06G133900 Gossypium hirsutum HOM05D003630 ORTHO05D004151 5.9e-32 141.0 120 70.0
Prupe.4G050800 Prunus persica HOM05D003630 ORTHO05D004151 1.3e-31 139.8 116 66.4
PGR004G0839 Punica granatum HOM05D003630 ORTHO05D004151 1.3e-31 139.8 121 65.3
CSS0035295 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 2.2e-31 139.0 119 68.1
Migut.H01476 Erythranthe guttata HOM05D003630 ORTHO05D004151 2.2e-31 139.0 120 64.2
CANSAT35G1140 Cannabis sativa HOM05D003630 ORTHO05D004151 2.9e-31 138.7 122 64.8
PGR042G3375 Punica granatum HOM05D003630 ORTHO05D004151 2.9e-31 138.7 114 72.8
SalBow8G2511 Salvia bowleyana HOM05D003630 ORTHO05D004151 2.9e-31 138.7 113 56.6
Aqoxy1G02347 Aquilegia oxysepala HOM05D003630 ORTHO05D004151 3.8e-31 138.3 123 61.0
Ah.09g237490 Amaranthus hybridus HOM05D003630 ORTHO05D004151 1.1e-30 136.7 122 66.4
Nitab4.5_0000516g0130 Nicotiana tabacum HOM05D003630 ORTHO05D004151 1.1e-30 136.7 121 68.6
Oeu012144.1 Olea europaea HOM05D003630 ORTHO05D004151 1.5e-30 136.3 119 69.7
Solyc02g077880.3 Solanum lycopersicum HOM05D003630 ORTHO05D004151 1.5e-30 136.3 118 63.6
Sopen02g022730 Solanum pennellii HOM05D003630 ORTHO05D004151 1.5e-30 136.3 118 63.6
CiPaw.04G030300 Carya illinoinensis HOM05D003630 ORTHO05D004151 1.9e-30 136.0 108 72.2
DCAR_003387 Daucus carota HOM05D003630 ORTHO05D004151 1.9e-30 136.0 120 66.7
PGSC0003DMG400029732 Solanum tuberosum HOM05D003630 ORTHO05D004151 1.9e-30 136.0 118 60.2
TAR624G0603 Trochodendron aralioides HOM05D003630 ORTHO05D004151 1.9e-30 136.0 117 58.1
unitig_749.g13657 Utricularia gibba HOM05D003630 ORTHO05D004151 1.9e-30 136.0 120 62.5
Duzib235G1039 Durio zibethinus HOM05D003630 ORTHO05D004151 3.2e-30 135.2 108 75.0
Nitab4.5_0003487g0100 Nicotiana tabacum HOM05D003630 ORTHO05D004151 5.5e-30 134.4 122 65.6
MSTRG.13203 Avicennia marina HOM05D003630 ORTHO05D004151 7.2e-30 134.0 117 65.0
Carub.0001s2678 Capsella rubella HOM05D003630 ORTHO05D004151 9.4e-30 133.7 120 62.5
MELO3C007269.2 Cucumis melo HOM05D003630 ORTHO05D004151 9.4e-30 133.7 107 71.0
Cfa000510 Carpinus fangiana HOM05D003630 ORTHO05D004151 2.1e-29 132.5 108 73.1
ECA236G4733 Erigeron canadensis HOM05D003630 ORTHO05D004151 2.1e-29 132.5 116 61.2
Migut.M01120 Erythranthe guttata HOM05D003630 ORTHO05D004151 2.1e-29 132.5 122 54.9
Oeu056100.2 Olea europaea HOM05D003630 ORTHO05D004151 2.7e-29 132.1 118 65.3
Haze_06402 Corylus avellana HOM05D003630 ORTHO05D004151 3.6e-29 131.7 110 71.8
Oeu029367.1 Olea europaea HOM05D003630 ORTHO05D004151 3.6e-29 131.7 115 61.7
TWI38G1867 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 3.6e-29 131.7 106 74.5
AUR62014851 Chenopodium quinoa HOM05D003630 ORTHO05D004151 4.7e-29 131.3 120 67.5
CDE11G0243 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 6.1e-29 131.0 116 61.2
Thhalv10009086m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 6.1e-29 131.0 120 63.3
SGA_v2.0_scaffold100G29703 Striga asiatica HOM05D003630 ORTHO05D004151 6.1e-29 131.0 119 63.9
AUR62017046 Chenopodium quinoa HOM05D003630 ORTHO05D004151 8.0e-29 130.6 120 65.8
MBI02_g32444_MAGBIO Magnolia biondii HOM05D003630 ORTHO05D004151 8.0e-29 130.6 125 64.0
CSS0037340 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 1.0e-28 130.2 106 71.7
BcaB07g32449 Brassica carinata HOM05D003630 ORTHO05D004151 1.4e-28 129.8 117 61.5
CSS0033873 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 1.8e-28 129.4 105 68.6
Solyc03g006360.3 Solanum lycopersicum HOM05D003630 ORTHO05D004151 3.0e-28 128.6 127 58.3
BcaC05g26841 Brassica carinata HOM05D003630 ORTHO05D004151 3.9e-28 128.3 117 59.8
Dinv40586 Davidia involucrata HOM05D003630 ORTHO05D004151 3.9e-28 128.3 108 73.1
Os11g0671000 Oryza sativa ssp. japonica HOM05D003630 ORTHO05D004151 3.9e-28 128.3 124 62.9
PGSC0003DMG400012826 Solanum tuberosum HOM05D003630 ORTHO05D004151 3.9e-28 128.3 126 57.1
COL.COLO4_31436 Corchorus olitorius HOM05D003630 ORTHO05D004151 6.7e-28 127.5 107 73.8
Potri.004G047100 Populus trichocarpa HOM05D003630 ORTHO05D004151 1.1e-27 126.7 112 71.4
EL10Ac8g20421 Beta vulgaris HOM05D003630 ORTHO05D004151 1.5e-27 126.3 124 62.1
Manes.16G030000 Manihot esculenta HOM05D003630 ORTHO05D004151 1.5e-27 126.3 105 70.5
THA.LOC104812301 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 1.5e-27 126.3 114 63.2
vmacro15923 Vaccinium macrocarpon HOM05D003630 ORTHO05D004151 1.5e-27 126.3 120 56.7
PSO541G4117 Papaver somniferum HOM05D003630 ORTHO05D004151 4.4e-27 124.8 122 58.2
MSTRG.15866 Avicennia marina HOM05D003630 ORTHO05D004151 5.7e-27 124.4 119 58.0
Gorai.009G167500 Gossypium raimondii HOM05D003630 ORTHO05D004151 5.7e-27 124.4 101 62.4
THA.LOC104814224 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 1.7e-26 122.9 109 65.1
HPP92_018480 Vanilla planifolia HOM05D003630 ORTHO05D004151 2.2e-26 122.5 123 57.7
HPP92_018482 Vanilla planifolia HOM05D003630 ORTHO05D004151 2.8e-26 122.1 123 57.7
Ciclev10017162m.g Citrus clementina HOM05D003630 ORTHO05D004151 3.7e-26 121.7 110 70.0
Peaxi162Scf01100g00009 Petunia axillaris HOM05D003630 ORTHO05D004151 3.7e-26 121.7 118 63.6
Thhalv10003427m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 8.2e-26 120.6 117 56.4
Sp2g09130 Schrenkiella parvula HOM05D003630 ORTHO05D004151 8.2e-26 120.6 118 55.1
BraA02t07868Z Brassica rapa HOM05D003630 ORTHO05D004151 1.4e-25 119.8 118 55.9
CDE05G2086 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 1.4e-25 119.8 117 57.3
Atru.chr10.1820 Acer truncatum HOM05D003630 ORTHO05D004151 2.4e-25 119.0 108 66.7
Atru.chr10.1837 Acer truncatum HOM05D003630 ORTHO05D004151 2.4e-25 119.0 108 66.7
AL8G15690 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 2.4e-25 119.0 118 55.1
A02p28330 Brassica napus HOM05D003630 ORTHO05D004151 3.1e-25 118.6 118 55.1
C02p44910 Brassica napus HOM05D003630 ORTHO05D004151 3.1e-25 118.6 118 55.1
BolC2t10526H Brassica oleracea HOM05D003630 ORTHO05D004151 3.1e-25 118.6 118 55.1
AT2G33830 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 5.3e-25 117.9 118 55.9
AT5G44300 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 5.3e-25 117.9 118 54.2
HanXRQChr04g0123791 Helianthus annuus HOM05D003630 ORTHO05D004151 5.3e-25 117.9 112 62.5
BcaB02g10597 Brassica carinata HOM05D003630 ORTHO05D004151 7.0e-25 117.5 119 55.5
Aa31LG9G8870 Aethionema arabicum HOM05D003630 ORTHO05D004151 1.2e-24 116.7 115 52.2
Gorai.010G155600 Gossypium raimondii HOM05D003630 ORTHO05D004151 1.6e-24 116.3 107 67.3
Sp4g16220 Schrenkiella parvula HOM05D003630 ORTHO05D004151 2.0e-24 115.9 114 55.3
CARHR027820 Cardamine hirsuta HOM05D003630 ORTHO05D004151 2.6e-24 115.5 119 58.0
AL4G29600 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 3.5e-24 115.2 114 55.3
Carub.0004s1550 Capsella rubella HOM05D003630 ORTHO05D004151 3.5e-24 115.2 114 54.4
BcaC02g11461 Brassica carinata HOM05D003630 ORTHO05D004151 4.5e-24 114.8 116 55.2
A03p18920 Brassica napus HOM05D003630 ORTHO05D004151 4.5e-24 114.8 115 54.8
C04p15210 Brassica napus HOM05D003630 ORTHO05D004151 4.5e-24 114.8 119 53.8
BolC4t23094H Brassica oleracea HOM05D003630 ORTHO05D004151 4.5e-24 114.8 119 53.8
A05p11750 Brassica napus HOM05D003630 ORTHO05D004151 5.9e-24 114.4 119 53.8
BolC3t14590H Brassica oleracea HOM05D003630 ORTHO05D004151 5.9e-24 114.4 114 53.5
BraA05t20119Z Brassica rapa HOM05D003630 ORTHO05D004151 5.9e-24 114.4 119 53.8
HanXRQChr01g0003821 Helianthus annuus HOM05D003630 ORTHO05D004151 5.9e-24 114.4 114 58.8
Sc24g0001020 Simmondsia chinensis HOM05D003630 ORTHO05D004151 5.9e-24 114.4 108 60.2
CARHR127940 Cardamine hirsuta HOM05D003630 ORTHO05D004151 1.0e-23 113.6 117 54.7
Carub.0008s0422 Capsella rubella HOM05D003630 ORTHO05D004151 1.3e-23 113.2 116 53.4
AL1G41920 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 1.7e-23 112.8 119 55.5
BcaB01g03917 Brassica carinata HOM05D003630 ORTHO05D004151 1.7e-23 112.8 114 54.4
BcaC01g05821 Brassica carinata HOM05D003630 ORTHO05D004151 1.7e-23 112.8 114 54.4
BcaC01g05822 Brassica carinata HOM05D003630 ORTHO05D004151 1.7e-23 112.8 114 54.4
BraA03t11151Z Brassica rapa HOM05D003630 ORTHO05D004151 1.7e-23 112.8 114 54.4
Sabra04G0029500 Salix brachista HOM05D003630 ORTHO05D004151 1.7e-23 112.8 111 64.9
Sp1g24570 Schrenkiella parvula HOM05D003630 ORTHO05D004151 1.7e-23 112.8 120 56.7
SEGI_31386 Sequoiadendron giganteum HOM05D003630 ORTHO05D004151 1.7e-23 112.8 132 49.2
AT1G28330 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 2.2e-23 112.5 111 58.6
PSO675G3190 Papaver somniferum HOM05D003630 ORTHO05D004151 2.2e-23 112.5 122 54.1
CARHR178890 Cardamine hirsuta HOM05D003630 ORTHO05D004151 2.9e-23 112.1 120 60.8
DCAR_008021 Daucus carota HOM05D003630 ORTHO05D004151 3.8e-23 111.7 118 60.2
Aa31sc86G60 Aethionema arabicum HOM05D003630 ORTHO05D004151 5.0e-23 111.3 107 56.1
HPP92_014190 Vanilla planifolia HOM05D003630 ORTHO05D004151 6.5e-23 110.9 117 47.9
Lsat_1_v5_gn_7_20981 Lactuca sativa HOM05D003630 ORTHO05D004151 1.1e-22 110.2 106 57.5
Sed0007569 Sechium edule HOM05D003630 ORTHO05D004151 1.5e-22 109.8 102 55.9
Rhsim02G0132700 Rhododendron simsii HOM05D003630 ORTHO05D004151 2.5e-22 109.0 111 55.9
A09p37730 Brassica napus HOM05D003630 ORTHO05D004151 4.2e-22 108.2 117 54.7
C05p27220 Brassica napus HOM05D003630 ORTHO05D004151 4.2e-22 108.2 117 54.7
BraA09t39285Z Brassica rapa HOM05D003630 ORTHO05D004151 4.2e-22 108.2 117 54.7
Aa31sc652G110 Aethionema arabicum HOM05D003630 ORTHO05D004151 7.2e-22 107.5 114 53.5
Aa31sc652G20 Aethionema arabicum HOM05D003630 ORTHO05D004151 7.2e-22 107.5 114 53.5
Lsat_1_v5_gn_1_124360 Lactuca sativa HOM05D003630 ORTHO05D004151 7.2e-22 107.5 100 54.0
BolC5t31435H Brassica oleracea HOM05D003630 ORTHO05D004151 1.2e-21 106.7 117 53.0
Sopen03g002370 Solanum pennellii HOM05D003630 ORTHO05D004151 1.0e-20 103.6 119 58.8
BcaC03g16649 Brassica carinata HOM05D003630 ORTHO05D004151 3.0e-20 102.1 108 53.7
Thhalv10017461m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 3.0e-20 102.1 120 49.2
C03p22060 Brassica napus HOM05D003630 ORTHO05D004151 1.2e-19 100.1 104 52.9
BcaB07g30534 Brassica carinata HOM05D003630 ORTHO05D004151 9.1e-17 90.5 104 51.0
CAN.G529.26 Capsicum annuum HOM05D003630 ORTHO05D004151 2.0e-16 89.4 49 79.6
SMO343G0126 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 7.7e-16 87.4 157 35.7
MD14G1054500 Malus domestica HOM05D003630 ORTHO05D004151 3.8e-15 85.1 97 49.5
Pp3c15_6160 Physcomitrium patens HOM05D003630 ORTHO05D004151 5.0e-15 84.7 146 32.2
ECA248G1596 Erigeron canadensis HOM05D000885 ORTHO05D008875 1.5e-14 83.2 83 57.8
Mapoly0057s0054 Marchantia polymorpha HOM05D003630 ORTHO05D004151 1.9e-14 82.8 139 35.3
AagrBONN_evm.TU.Sc2ySwM_228.5600 Anthoceros agrestis HOM05D003630 ORTHO05D004151 4.2e-14 81.6 149 34.9
SMO367G0919 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 9.4e-14 80.5 115 40.9
Sc17g0006070 Simmondsia chinensis HOM05D003630 ORTHO05D004151 6.1e-13 77.8 109 53.2
Aa31LG9G7730 Aethionema arabicum HOM05D003630 ORTHO05D004151 2.6e-11 72.4 87 46.0
COL.COLO4_29750 Corchorus olitorius HOM05D003630 ORTHO05D004151 4.1e-09 65.1 40 75.0
Pp3c10_24000 Physcomitrium patens HOM05D003630 ORTHO05D004151 7.7e-08 60.8 153 27.5
Pp3c24_1050 Physcomitrium patens HOM05D003630 ORTHO05D004151 7.7e-08 60.8 150 26.0
AagrBONN_evm.TU.Sc2ySwM_362.1976 Anthoceros agrestis HOM05D003630 ORTHO05D004151 1.0e-07 60.5 42 57.1
Eucgr.E03257 Eucalyptus grandis HOM05D003630 ORTHO05D004151 2.9e-07 58.9 48 58.3
Pp3c23_13750 Physcomitrium patens HOM05D003630 ORTHO05D004151 8.6e-07 57.4 161 23.6
Eucgr.D00606 Eucalyptus grandis HOM05D003630 ORTHO05D004151 1.9e-06 56.2 27 88.9
Pp3c20_21690 Physcomitrium patens HOM05D003630 ORTHO05D004151 1.9e-06 56.2 153 26.8
Actinidia26134 Actinidia chinensis HOM05D003630 ORTHO05D004151 9.5e-06 53.9 36 63.9


User provided reference genes

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