Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr14g0374511 Lupinus albus HOM05D007861 ORTHO05D007271 7.1e-53 210.3 104 100.0
Lalb_Chr24g0394821 Lupinus albus HOM05D007861 ORTHO05D007271 2.1e-49 198.7 104 93.3
Lj3g0021425 Lotus japonicus HOM05D007861 ORTHO05D007271 4.9e-38 161.0 105 74.3
Glyma.12G177000 Glycine max HOM05D007861 ORTHO05D007271 6.4e-38 160.6 102 78.4
Glyma.13G323700 Glycine max HOM05D007861 ORTHO05D007271 6.4e-38 160.6 101 77.2
Phvul.005G132100 Phaseolus vulgaris HOM05D007861 ORTHO05D007271 7.1e-37 157.1 102 77.5
arahy.Tifrunner.gnm1.ann1.ALS1H8 Arachis hypogaea HOM05D007861 ORTHO05D007271 5.1e-35 151.0 102 74.5
TPR.G11489 Trifolium pratense HOM05D007861 ORTHO05D007271 2.4e-32 142.1 104 70.2
Glyma.12G079100 Glycine max HOM05D007861 ORTHO05D007271 5.3e-32 141.0 100 68.0
Glyma.11G195000 Glycine max HOM05D007861 ORTHO05D007271 1.2e-31 139.8 100 68.0
Medtr2g095310 Medicago truncatula HOM05D007861 ORTHO05D007271 1.0e-30 136.7 103 68.0
Lj3g0027314 Lotus japonicus HOM05D007861 ORTHO05D007271 1.3e-30 136.3 100 66.0
Lalb_Chr01g0004491 Lupinus albus HOM05D007861 ORTHO05D007271 1.3e-30 136.3 101 66.3
Phvul.011G083700 Phaseolus vulgaris HOM05D007861 ORTHO05D007271 1.3e-30 136.3 98 68.4
TPR.G6167 Trifolium pratense HOM05D007861 ORTHO05D007271 1.3e-30 136.3 111 64.9
VMungo1127G1395 Vigna mungo HOM05D007861 ORTHO05D007271 2.5e-29 132.1 99 65.7
Lalb_Chr03g0027611 Lupinus albus HOM05D007861 ORTHO05D007271 1.6e-28 129.4 101 64.4
Medtr4g057830 Medicago truncatula HOM05D007861 ORTHO05D007271 4.5e-23 111.3 78 69.2
Haze_23757 Corylus avellana HOM05D007861 ORTHO05D007271 1.0e-19 100.1 88 56.8
Cfa010349 Carpinus fangiana HOM05D007861 ORTHO05D007271 2.3e-19 99.0 82 58.5
CiPaw.14G086500 Carya illinoinensis HOM05D007861 ORTHO05D007271 4.3e-18 94.7 106 50.0
FAN16G3504 Fragaria x ananassa HOM05D007861 ORTHO05D007271 4.3e-18 94.7 108 50.9
FvH4_3g31180 Fragaria vesca HOM05D007861 ORTHO05D007271 9.7e-18 93.6 108 51.9
FAN11G3777 Fragaria x ananassa HOM05D007861 ORTHO05D007271 9.7e-18 93.6 108 51.9
FAN25G1997 Fragaria x ananassa HOM05D007861 ORTHO05D007271 9.7e-18 93.6 108 51.9
Prupe.6G107700 Prunus persica HOM05D007861 ORTHO05D007271 1.3e-17 93.2 106 52.8
CiPaw.13G118000 Carya illinoinensis HOM05D007861 ORTHO05D007271 1.6e-17 92.8 97 54.6
Sed0017526 Sechium edule HOM05D007861 ORTHO05D007271 1.6e-17 92.8 94 54.3
FAN21G2212 Fragaria x ananassa HOM05D007861 ORTHO05D007271 1.1e-16 90.1 108 50.0
RcHm_v2.0_Chr5g0057831 Rosa chinensis HOM05D007861 ORTHO05D007271 1.4e-16 89.7 99 50.5
Sed0005749 Sechium edule HOM05D007861 ORTHO05D007271 5.3e-16 87.8 88 53.4
ClCG02G021400 Citrullus lanatus HOM05D007861 ORTHO05D007271 4.5e-15 84.7 74 59.5
Potri.009G008300 Populus trichocarpa HOM05D007861 ORTHO05D007271 2.9e-14 82.0 103 50.5
CsaV3_6G014180 Cucumis sativus L. HOM05D007861 ORTHO05D007271 3.8e-14 81.6 94 53.2
MELO3C026916.2 Cucumis melo HOM05D007861 ORTHO05D007271 6.5e-14 80.9 95 52.6
Potri.004G213900 Populus trichocarpa HOM05D007861 ORTHO05D007271 3.2e-13 78.6 89 52.8
Manes.11G150200 Manihot esculenta HOM05D007861 ORTHO05D007271 4.2e-13 78.2 106 45.3
Thecc.09G347700 Theobroma cacao HOM05D007861 ORTHO05D007271 4.2e-13 78.2 108 45.4
Atru.chr3.3557 Acer truncatum HOM05D007861 ORTHO05D007271 2.1e-12 75.9 105 47.6
COL.COLO4_34705 Corchorus olitorius HOM05D007861 ORTHO05D007271 2.1e-12 75.9 105 45.7
Gorai.004G230800 Gossypium raimondii HOM05D007861 ORTHO05D007271 2.1e-12 75.9 106 42.5
Ciclev10029681m.g Citrus clementina HOM05D007861 ORTHO05D007271 4.6e-12 74.7 92 48.9
Nn2g11569 Nelumbo nucifera HOM05D007861 ORTHO05D007271 4.6e-12 74.7 105 45.7
Gohir.A05G106400 Gossypium hirsutum HOM05D007861 ORTHO05D007271 6.1e-12 74.3 99 43.4
Gohir.D08G217100 Gossypium hirsutum HOM05D007861 ORTHO05D007271 6.1e-12 74.3 106 42.5
Gohir.A08G200000 Gossypium hirsutum HOM05D007861 ORTHO05D007271 7.9e-12 73.9 106 42.5
Nn2g13767 Nelumbo nucifera HOM05D007861 ORTHO05D007271 1.0e-11 73.6 110 47.3
TAR633G0087 Trochodendron aralioides HOM05D007861 ORTHO05D007271 1.0e-11 73.6 100 45.0
MSTRG.21100 Avicennia marina HOM05D007861 ORTHO05D007271 1.8e-11 72.8 103 44.7
Hma1.2p1_0569F.1_g180260 Hydrangea macrophylla HOM05D007861 ORTHO05D007271 2.3e-11 72.4 69 50.7
DCAR_018786 Daucus carota HOM05D007861 ORTHO05D007271 5.1e-11 71.2 82 45.1
Gohir.D05G106401 Gossypium hirsutum HOM05D007861 ORTHO05D007271 5.1e-11 71.2 99 42.4
Gorai.009G110500 Gossypium raimondii HOM05D007861 ORTHO05D007271 5.1e-11 71.2 99 42.4
Sabra09G0004800 Salix brachista HOM05D007861 ORTHO05D007271 2.0e-10 69.3 90 51.1
Sabra04G0145100 Salix brachista HOM05D007861 ORTHO05D007271 5.7e-10 67.8 86 53.5
PGSC0003DMG400019683 Solanum tuberosum HOM05D007861 ORTHO05D007271 7.4e-10 67.4 63 55.6
Cpa.g.sc65.32 Carica papaya HOM05D007861 ORTHO05D007271 9.7e-10 67.0 96 45.8
Migut.D02257 Erythranthe guttata HOM05D007861 ORTHO05D007271 9.7e-10 67.0 74 51.4
Sp4g10850 Schrenkiella parvula HOM05D014739 ORTHO05D007271 3.7e-09 65.1 69 55.1
Manes.04G015900 Manihot esculenta HOM05D007861 ORTHO05D007271 6.3e-09 64.3 91 46.2
BraA04t17695Z Brassica rapa HOM05D014739 ORTHO05D007271 1.1e-08 63.5 96 42.7
Aqoxy1G01166 Aquilegia oxysepala HOM05D007861 ORTHO05D007271 1.8e-08 62.8 109 41.3
BcaB06g28183 Brassica carinata HOM05D014739 ORTHO05D007271 2.4e-08 62.4 96 42.7
C04p57110 Brassica napus HOM05D014739 ORTHO05D007271 3.1e-08 62.0 96 42.7
Hma1.2p1_0344F.1_g131140 Hydrangea macrophylla HOM05D007861 ORTHO05D007271 3.1e-08 62.0 54 53.7
BcaC02g08213 Brassica carinata HOM05D014739 ORTHO05D007271 4.1e-08 61.6 96 42.7
A04p21280 Brassica napus HOM05D014739 ORTHO05D007271 4.1e-08 61.6 96 42.7
BolC4t27246H Brassica oleracea HOM05D014739 ORTHO05D007271 4.1e-08 61.6 96 42.7
Migut.N02575 Erythranthe guttata HOM05D007861 ORTHO05D007271 4.1e-08 61.6 75 45.3
Carub.0004s0882 Capsella rubella HOM05D014739 ORTHO05D007271 5.3e-08 61.2 84 44.0
Solyc11g069730.1 Solanum lycopersicum HOM05D007861 ORTHO05D007271 5.3e-08 61.2 47 61.7
Migut.F01962 Erythranthe guttata HOM05D007861 ORTHO05D007271 2.0e-07 59.3 92 41.3
Potri.008G036000 Populus trichocarpa HOM05D007861 ORTHO05D007271 2.6e-07 58.9 109 39.4
CARHR120770 Cardamine hirsuta HOM05D014739 ORTHO05D007271 3.4e-07 58.5 90 41.1
Thhalv10017662m.g Eutrema salsugineum HOM05D014739 ORTHO05D007271 4.5e-07 58.2 84 41.7
CSS0012629 Camellia sinensis var. sinensis HOM05D007861 ORTHO05D007271 1.0e-06 57.0 106 41.5
Manes.10G049800 Manihot esculenta HOM05D009695 ORTHO05D007271 1.0e-06 57.0 97 41.2
Cfa001682 Carpinus fangiana HOM05D009695 ORTHO05D007271 2.2e-06 55.8 107 38.3
Sopen06g031390 Solanum pennellii HOM05D039995 ORTHO05D007271 2.2e-06 55.8 66 48.5
Eucgr.J00896 Eucalyptus grandis HOM05D007861 ORTHO05D007271 3.8e-06 55.1 75 41.3


User provided reference genes

Program Settings