Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr14g0374171 Lupinus albus HOM05D002310 ORTHO05D002326 0.0e+00 1203.3 672 100.0
arahy.Tifrunner.gnm1.ann1.CLV3JT Arachis hypogaea HOM05D002310 ORTHO05D002326 9.9e-39 166.0 654 30.4
arahy.Tifrunner.gnm1.ann1.TMAT12 Arachis hypogaea HOM05D002310 ORTHO05D002326 6.4e-38 163.3 666 29.3
Duzib168G1650 Durio zibethinus HOM05D002310 ORTHO05D002326 1.2e-15 89.4 97 50.5
CSS0005169 Camellia sinensis var. sinensis HOM05D002310 ORTHO05D002326 6.5e-14 83.6 172 34.9
GSVIVG01031382001 Vitis vinifera HOM05D002310 ORTHO05D002326 6.5e-14 83.6 105 47.6
Gohir.D07G112001 Gossypium hirsutum HOM05D002310 ORTHO05D002326 2.5e-13 81.6 192 30.7
Actinidia07217 Actinidia chinensis HOM05D002310 ORTHO05D002326 9.3e-13 79.7 144 38.2
Gorai.001G120400 Gossypium raimondii HOM05D002310 ORTHO05D002326 6.0e-12 77.0 89 43.8
COL.COLO4_19955 Corchorus olitorius HOM05D002310 ORTHO05D002326 1.3e-11 75.9 79 50.6
PGR102G1882 Punica granatum HOM05D002310 ORTHO05D002326 3.0e-11 74.7 116 37.9
Thecc.09G289700 Theobroma cacao HOM05D002310 ORTHO05D002326 3.9e-11 74.3 90 43.3
Gohir.A07G108250 Gossypium hirsutum HOM05D002310 ORTHO05D002326 1.9e-10 72.0 89 42.7
Actinidia24186 Actinidia chinensis HOM05D002310 ORTHO05D002326 2.5e-10 71.6 167 33.5
Nn6g35014 Nelumbo nucifera HOM05D002310 ORTHO05D002326 2.5e-10 71.6 104 42.3
Manes.11G158900 Manihot esculenta HOM05D002310 ORTHO05D002326 4.3e-10 70.9 92 39.1
CANSAT54G1082 Cannabis sativa HOM05D002310 ORTHO05D002326 1.6e-09 68.9 117 40.2
CANSAT54G1757 Cannabis sativa HOM05D002310 ORTHO05D002326 1.6e-09 68.9 117 40.2
Dinv42583 Davidia involucrata HOM05D002310 ORTHO05D002326 1.6e-09 68.9 157 34.4
CAN.G644.19 Capsicum annuum HOM05D002310 ORTHO05D002326 2.8e-09 68.2 110 40.9
Hma1.2p1_0246F.1_g101720 Hydrangea macrophylla HOM05D002310 ORTHO05D002326 2.8e-09 68.2 66 48.5
Lj2A990G28 Lonicera japonica HOM05D002310 ORTHO05D002326 3.7e-09 67.8 47 63.8
SGA_v2.0_scaffold147G36352 Striga asiatica HOM05D002310 ORTHO05D002326 4.8e-09 67.4 87 36.8
Nitab4.5_0004070g0010 Nicotiana tabacum HOM05D002310 ORTHO05D002326 1.1e-08 66.2 101 40.6
Rhsim13G0106900 Rhododendron simsii HOM05D002310 ORTHO05D002326 1.1e-08 66.2 179 31.8
PGSC0003DMG400026527 Solanum tuberosum HOM05D002310 ORTHO05D002326 1.4e-08 65.9 48 62.5
Dinv20806 Davidia involucrata HOM05D002310 ORTHO05D002326 1.8e-08 65.5 67 49.3
Nitab4.5_0006089g0010 Nicotiana tabacum HOM05D002310 ORTHO05D002326 1.8e-08 65.5 202 31.7
TAR633G0746 Trochodendron aralioides HOM05D002310 ORTHO05D002326 1.8e-08 65.5 399 23.1
MELO3C019889.2 Cucumis melo HOM05D002310 ORTHO05D002326 3.1e-08 64.7 68 51.5
Solyc11g066990.2 Solanum lycopersicum HOM05D002310 ORTHO05D002326 4.1e-08 64.3 48 60.4
Sopen11g026700 Solanum pennellii HOM05D002310 ORTHO05D002326 4.1e-08 64.3 48 60.4
Atru.chr3.3356 Acer truncatum HOM05D002310 ORTHO05D002326 5.3e-08 63.9 190 30.5
ClCG02G021960 Citrullus lanatus HOM05D002310 ORTHO05D002326 6.9e-08 63.5 134 36.6
CsaV3_6G004130 Cucumis sativus L. HOM05D002310 ORTHO05D002326 6.9e-08 63.5 59 54.2
Thecc.10G104000 Theobroma cacao HOM05D002310 ORTHO05D002326 6.9e-08 63.5 99 39.4
TWI79G0679 Tripterygium wilfordii HOM05D002310 ORTHO05D002326 6.9e-08 63.5 136 33.8
Eucgr.B03884 Eucalyptus grandis HOM05D002310 ORTHO05D002326 9.0e-08 63.2 109 33.0
QL04p042592 Quercus lobata HOM05D002310 ORTHO05D002326 1.5e-07 62.4 47 59.6
CiPaw.13G037400 Carya illinoinensis HOM05D002310 ORTHO05D002326 2.0e-07 62.0 60 53.3
Migut.D02361 Erythranthe guttata HOM05D002310 ORTHO05D002326 2.0e-07 62.0 137 32.8
SalBow6G0002 Salvia bowleyana HOM05D002310 ORTHO05D002326 2.6e-07 61.6 175 28.0
COL.COLO4_20106 Corchorus olitorius HOM05D002310 ORTHO05D002326 3.4e-07 61.2 67 46.3
SEGI_33353 Sequoiadendron giganteum HOM05D002310 ORTHO05D002326 3.4e-07 61.2 89 36.0
Cpa.g.sc19.12 Carica papaya HOM05D002310 ORTHO05D002326 4.5e-07 60.8 60 50.0
CiPaw.14G029600 Carya illinoinensis HOM05D002310 ORTHO05D002326 4.5e-07 60.8 57 52.6
DCAR_012177 Daucus carota HOM05D002310 ORTHO05D002326 4.5e-07 60.8 171 31.0
Lj2C29T14 Lonicera japonica HOM05D002310 ORTHO05D002326 4.5e-07 60.8 65 44.6
Potri.009G147201 Populus trichocarpa HOM05D002310 ORTHO05D002326 4.5e-07 60.8 74 40.5
DCAR_006351 Daucus carota HOM05D002310 ORTHO05D002326 5.9e-07 60.5 194 27.3
Rhsim03G0104900 Rhododendron simsii HOM05D002310 ORTHO05D002326 5.9e-07 60.5 56 55.4
ATR0820G154 Amborella trichopoda HOM05D002310 ORTHO05D002326 7.7e-07 60.1 107 33.6
MELO3C021446.2 Cucumis melo HOM05D002310 ORTHO05D002326 1.0e-06 59.7 112 36.6
Duzib114G0931 Durio zibethinus HOM05D002310 ORTHO05D002326 1.0e-06 59.7 99 38.4
RcHm_v2.0_Chr1g0332961 Rosa chinensis HOM05D002310 ORTHO05D002326 1.0e-06 59.7 57 52.6
Actinidia18583 Actinidia chinensis HOM05D002310 ORTHO05D002326 1.3e-06 59.3 117 35.0
Aqoxy4G02858 Aquilegia oxysepala HOM05D002310 ORTHO05D002326 1.3e-06 59.3 81 43.2
PSO384G5061 Papaver somniferum HOM05D002310 ORTHO05D002326 1.7e-06 58.9 87 42.5
PSO443G0025 Papaver somniferum HOM05D002310 ORTHO05D002326 1.7e-06 58.9 48 56.2
TWI38G0268 Tripterygium wilfordii HOM05D002310 ORTHO05D002326 1.7e-06 58.9 48 56.2
CSS0033098 Camellia sinensis var. sinensis HOM05D002310 ORTHO05D002326 2.2e-06 58.5 226 28.8
Cpa.g.sc509.3 Carica papaya HOM05D002310 ORTHO05D002326 2.2e-06 58.5 117 35.9
Ciclev10030758m.g Citrus clementina HOM05D002310 ORTHO05D002326 2.2e-06 58.5 48 54.2
vmacro07230 Vaccinium macrocarpon HOM05D002310 ORTHO05D002326 2.2e-06 58.5 203 30.5
Cc01_g09630 Coffea canephora HOM05D002310 ORTHO05D002326 2.9e-06 58.2 43 55.8
Duzib106G1173 Durio zibethinus HOM05D002310 ORTHO05D002326 2.9e-06 58.2 99 37.4
Migut.O00646 Erythranthe guttata HOM05D002310 ORTHO05D002326 2.9e-06 58.2 198 29.3
Aqoxy2G01357 Aquilegia oxysepala HOM05D002310 ORTHO05D002326 3.8e-06 57.8 47 57.4
ClCG08G008160 Citrullus lanatus HOM05D002310 ORTHO05D002326 3.8e-06 57.8 65 49.2
Cc02_g09970 Coffea canephora HOM05D002310 ORTHO05D002326 3.8e-06 57.8 131 34.4
MD03G1136700 Malus domestica HOM05D002310 ORTHO05D002326 3.8e-06 57.8 57 52.6
Gohir.A05G395100 Gossypium hirsutum HOM05D002310 ORTHO05D002326 5.0e-06 57.4 99 36.4
HanXRQChr08g0217861 Helianthus annuus HOM05D002310 ORTHO05D002326 5.0e-06 57.4 48 54.2
MD02G1254600 Malus domestica HOM05D002310 ORTHO05D002326 5.0e-06 57.4 57 50.9
MD07G1067200 Malus domestica HOM05D002310 ORTHO05D002326 5.0e-06 57.4 57 50.9
CAN.G534.15 Capsicum annuum HOM05D002310 ORTHO05D002326 6.5e-06 57.0 111 36.0


User provided reference genes

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