Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr14g0373721 Lupinus albus HOM05D007863 ORTHO05D009265 6.6e-45 183.7 97 100.0
Medtr2g103440 Medicago truncatula HOM05D007863 ORTHO05D009265 7.6e-17 90.5 103 60.2
arahy.Tifrunner.gnm1.ann1.JQ3RYK Arachis hypogaea HOM05D007863 ORTHO05D009265 1.0e-16 90.1 88 67.0
TPR.G37228 Trifolium pratense HOM05D007863 ORTHO05D009265 1.0e-16 90.1 108 60.2
Lj3g0003830 Lotus japonicus HOM05D007863 ORTHO05D009265 2.9e-16 88.6 102 58.8
Psat5g301160 Pisum sativum HOM05D007863 ORTHO05D009265 2.9e-16 88.6 105 56.2
Lj3g0006922 Lotus japonicus HOM05D007863 ORTHO05D009265 4.9e-16 87.8 101 56.4
Ca_01070_v3 Cicer arietinum L. HOM05D007863 ORTHO05D009265 3.2e-15 85.1 102 56.9
Lalb_Chr25g0279481 Lupinus albus HOM05D007863 ORTHO05D009265 4.6e-14 81.3 105 53.3
MD17G1207500 Malus domestica HOM05D007863 ORTHO05D009265 4.6e-14 81.3 91 52.7
FAN09G3905 Fragaria x ananassa HOM05D007863 ORTHO05D009265 2.3e-13 79.0 64 68.8
Medtr4g011030 Medicago truncatula HOM05D007863 ORTHO05D009265 2.3e-13 79.0 99 51.5
FAN05G0465 Fragaria x ananassa HOM05D007863 ORTHO05D009265 8.7e-13 77.0 89 55.1
FvH4_6g30170 Fragaria vesca HOM05D007863 ORTHO05D009265 1.5e-12 76.3 89 55.1
FAN14G0247 Fragaria x ananassa HOM05D007863 ORTHO05D009265 1.5e-12 76.3 89 55.1
Prupe.3G082000 Prunus persica HOM05D007863 ORTHO05D009265 1.5e-12 76.3 99 53.5
FAN02G1499 Fragaria x ananassa HOM05D007863 ORTHO05D009265 1.9e-12 75.9 93 51.6
RcHm_v2.0_Chr2g0136401 Rosa chinensis HOM05D007863 ORTHO05D009265 3.3e-12 75.1 94 52.1
Lalb_Chr04g0262451 Lupinus albus HOM05D007863 ORTHO05D009265 4.3e-12 74.7 99 52.5
Psat7g256040 Pisum sativum HOM05D007863 ORTHO05D009265 4.3e-12 74.7 56 71.4
TPR.G38680 Trifolium pratense HOM05D007863 ORTHO05D009265 9.7e-12 73.6 101 51.5
Haze_16524 Corylus avellana HOM05D007863 ORTHO05D009265 1.3e-11 73.2 79 57.0
Glyma.15G009600 Glycine max HOM05D007863 ORTHO05D009265 4.8e-11 71.2 95 51.6
Nitab4.5_0010254g0050 Nicotiana tabacum HOM05D007863 ORTHO05D009265 4.1e-10 68.2 101 48.5
PGR102G1764 Punica granatum HOM05D007863 ORTHO05D009265 4.1e-10 68.2 46 76.1
Thecc.06G070300 Theobroma cacao HOM05D007863 ORTHO05D009265 5.3e-10 67.8 99 46.5
Glyma.13G364100 Glycine max HOM05D007863 ORTHO05D009265 6.9e-10 67.4 95 46.3
Phvul.005G176000 Phaseolus vulgaris HOM05D007863 ORTHO05D009265 6.9e-10 67.4 53 67.9
QL05p028236 Quercus lobata HOM05D007863 ORTHO05D009265 6.9e-10 67.4 77 53.2
Sopen03g035400 Solanum pennellii HOM05D007863 ORTHO05D009265 6.9e-10 67.4 88 47.7
Solyc03g116510.1 Solanum lycopersicum HOM05D007863 ORTHO05D009265 9.0e-10 67.0 62 59.7
Gohir.A10G075500 Gossypium hirsutum HOM05D007863 ORTHO05D009265 1.2e-09 66.6 65 60.0
Gohir.D10G076000 Gossypium hirsutum HOM05D007863 ORTHO05D009265 1.2e-09 66.6 65 60.0
Gorai.011G081800 Gossypium raimondii HOM05D007863 ORTHO05D009265 1.2e-09 66.6 65 60.0
CAN.G407.102 Capsicum annuum HOM05D007863 ORTHO05D009265 2.0e-09 65.9 52 71.2
Glyma.07G031800 Glycine max HOM05D007863 ORTHO05D009265 2.0e-09 65.9 54 66.7
Manes.11G054000 Manihot esculenta HOM05D007863 ORTHO05D009265 4.5e-09 64.7 67 55.2
Nitab4.5_0001764g0040 Nicotiana tabacum HOM05D007863 ORTHO05D009265 4.5e-09 64.7 101 45.5
AUR62011544 Chenopodium quinoa HOM05D007863 ORTHO05D009265 5.9e-09 64.3 59 62.7
Ciclev10027122m.g Citrus clementina HOM05D007863 ORTHO05D009265 5.9e-09 64.3 62 61.3
Sabra03G0036200 Salix brachista HOM05D007863 ORTHO05D009265 5.9e-09 64.3 84 47.6
SalBow2G0248 Salvia bowleyana HOM05D007863 ORTHO05D009265 7.6e-09 63.9 42 73.8
CANSAT56G0457 Cannabis sativa HOM05D007863 ORTHO05D009265 1.0e-08 63.5 45 73.3
COL.COLO4_12919 Corchorus olitorius HOM05D007863 ORTHO05D009265 1.3e-08 63.2 72 52.8
Glyma.08G211000 Glycine max HOM05D007863 ORTHO05D009265 1.3e-08 63.2 94 46.8
Cpa.g.sc10.233 Carica papaya HOM05D007863 ORTHO05D009265 2.2e-08 62.4 45 73.3
Cfa001994 Carpinus fangiana HOM05D007863 ORTHO05D009265 2.2e-08 62.4 68 57.4
Potri.001G171701 Populus trichocarpa HOM05D007863 ORTHO05D009265 2.9e-08 62.0 84 50.0
Rhsim08G0215300 Rhododendron simsii HOM05D007863 ORTHO05D009265 2.9e-08 62.0 80 50.0
Potri.003G062300 Populus trichocarpa HOM05D007863 ORTHO05D009265 5.0e-08 61.2 86 48.8
TWI12G0528 Tripterygium wilfordii HOM05D007863 ORTHO05D009265 5.0e-08 61.2 65 58.5
EL10Ac9g21922 Beta vulgaris HOM05D007863 ORTHO05D009265 8.5e-08 60.5 61 55.7
CiPaw.01G245400 Carya illinoinensis HOM05D007863 ORTHO05D009265 8.5e-08 60.5 97 41.2
Hma1.2p1_0515F.1_g170180 Hydrangea macrophylla HOM05D007863 ORTHO05D009265 8.5e-08 60.5 92 48.9
Manes.04G115800 Manihot esculenta HOM05D007863 ORTHO05D009265 8.5e-08 60.5 88 46.6
CSS0005162 Camellia sinensis var. sinensis HOM05D007863 ORTHO05D009265 1.4e-07 59.7 48 66.7
DCAR_025492 Daucus carota HOM05D007863 ORTHO05D009265 4.2e-07 58.2 53 62.3
ClCG09G002780 Citrullus lanatus HOM05D007863 ORTHO05D009265 4.6e-06 54.7 47 63.8
DCAR_016255 Daucus carota HOM05D007863 ORTHO05D009265 4.6e-06 54.7 41 65.9
Migut.I00793 Erythranthe guttata HOM05D007863 ORTHO05D009265 4.6e-06 54.7 74 48.6
Phvul.010G154300 Phaseolus vulgaris HOM05D007863 ORTHO05D009265 6.1e-06 54.3 61 49.2
Rhsim12G0192500 Rhododendron simsii HOM05D007863 ORTHO05D009265 6.1e-06 54.3 82 45.1
arahy.Tifrunner.gnm1.ann1.YMK8B4 Arachis hypogaea HOM05D007863 ORTHO05D009265 7.9e-06 53.9 44 65.9


User provided reference genes

Program Settings