Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr14g0373351 Lupinus albus HOM05D000013 ORTHO05D023202 6.3e-24 113.2 56 100.0
Lj3g0002176 Lotus japonicus HOM05D000662 ORTHO05D015424 7.5e-17 89.7 56 75.0
Phvul.005G167700 Phaseolus vulgaris HOM05D000013 ORTHO05D015424 2.4e-15 84.7 56 71.4
VMungo1080G0521 Vigna mungo HOM05D000013 ORTHO05D023202 5.4e-15 83.6 56 71.4
Glyma.15G015100 Glycine max HOM05D000662 ORTHO05D015424 3.5e-14 80.9 56 69.6
Glyma.07G005700 Glycine max HOM05D000013 ORTHO05D011766 8.9e-10 66.2 54 59.3
Glyma.20G035400 Glycine max HOM05D000662 ORTHO05D015424 1.2e-09 65.9 57 61.4
arahy.Tifrunner.gnm1.ann1.20WGQW Arachis hypogaea HOM05D000662 ORTHO05D015424 5.8e-09 63.5 56 55.4
arahy.Tifrunner.gnm1.ann1.Q4USAB Arachis hypogaea HOM05D000662 ORTHO05D015424 1.7e-08 62.0 56 53.6
Manes.11G045400 Manihot esculenta HOM05D000013 ORTHO05D000011 1.7e-08 62.0 56 50.0
QL05p022806 Quercus lobata HOM05D000004 ORTHO05D000002 1.7e-08 62.0 55 49.1
arahy.Tifrunner.gnm1.ann1.36XQKP Arachis hypogaea HOM05D000662 ORTHO05D015424 3.7e-08 60.8 56 53.6
QL05p022830 Quercus lobata HOM05D000013 ORTHO05D006595 3.7e-08 60.8 55 52.7
QL05p022931 Quercus lobata HOM05D000225 ORTHO05D001817 4.9e-08 60.5 55 47.3
Ciclev10024927m.g Citrus clementina HOM05D000013 ORTHO05D000011 1.9e-07 58.5 58 55.2
QL05p022816 Quercus lobata HOM05D000013 ORTHO05D000011 1.9e-07 58.5 55 47.3
arahy.Tifrunner.gnm1.ann1.A6GVEG Arachis hypogaea HOM05D000662 ORTHO05D015424 3.2e-07 57.8 50 54.0
Ciclev10014441m.g Citrus clementina HOM05D000013 ORTHO05D000011 3.2e-07 57.8 58 53.4
QL05p022689 Quercus lobata HOM05D000013 ORTHO05D025114 4.1e-07 57.4 55 58.2
Lj3g0023389 Lotus japonicus HOM05D000662 ORTHO05D015424 5.4e-07 57.0 40 70.0
Prupe.3G070000 Prunus persica HOM05D000013 ORTHO05D000011 5.4e-07 57.0 56 51.8
Gohir.D10G071100 Gossypium hirsutum HOM05D000013 ORTHO05D000011 9.2e-07 56.2 56 48.2
Gorai.011G075500 Gossypium raimondii HOM05D000013 ORTHO05D000011 9.2e-07 56.2 56 48.2
QL05p022711 Quercus lobata HOM05D000013 ORTHO05D000011 9.2e-07 56.2 55 56.4
QL05p023138 Quercus lobata HOM05D000013 ORTHO05D000011 1.6e-06 55.5 52 50.0
TAR624G0002 Trochodendron aralioides HOM05D000013 ORTHO05D000011 1.6e-06 55.5 56 48.2
Ciclev10027600m.g Citrus clementina HOM05D000013 ORTHO05D000011 2.1e-06 55.1 56 46.4
TAR624G0775 Trochodendron aralioides HOM05D000013 ORTHO05D000011 2.1e-06 55.1 56 48.2
Ciclev10024887m.g Citrus clementina HOM05D000013 ORTHO05D000011 3.5e-06 54.3 58 51.7
QL05p030683 Quercus lobata HOM05D000013 ORTHO05D000011 6.0e-06 53.5 55 49.1
Prupe.1G474500 Prunus persica HOM05D000013 ORTHO05D000011 7.8e-06 53.1 56 46.4
QL05p023275 Quercus lobata HOM05D000013 ORTHO05D000011 7.8e-06 53.1 55 47.3
Thecc.06G089700 Theobroma cacao HOM05D000013 ORTHO05D000011 7.8e-06 53.1 56 46.4


User provided reference genes

Program Settings