Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr14g0372881 Lupinus albus HOM05D004845 ORTHO05D005957 0.0e+00 1632.5 902 100.0
Lalb_Chr15g0087461 Lupinus albus HOM05D004845 ORTHO05D005957 3.8e-179 632.9 919 47.8
Glyma.08G196100 Glycine max HOM05D004845 ORTHO05D005957 2.5e-146 523.9 1050 43.2
Glyma.07G012400 Glycine max HOM05D004845 ORTHO05D005957 3.3e-146 523.5 1049 42.6
arahy.Tifrunner.gnm1.ann1.JSQ5P9 Arachis hypogaea HOM05D004845 ORTHO05D005957 4.3e-146 523.1 1050 43.0
Medtr8g015620 Medicago truncatula HOM05D004845 ORTHO05D005957 5.2e-144 516.2 1046 42.6
Ca_23299_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 8.9e-144 515.4 1051 43.8
arahy.Tifrunner.gnm1.ann1.7F0ZFP Arachis hypogaea HOM05D004845 ORTHO05D005957 3.6e-137 493.4 1052 42.4
VMungo0331G0639 Vigna mungo HOM05D004845 ORTHO05D005957 5.2e-136 489.6 1042 42.0
Psat4g193760 Pisum sativum HOM05D004845 ORTHO05D005957 1.3e-134 485.0 1041 41.9
Lj3g0006882 Lotus japonicus HOM05D004845 ORTHO05D005957 1.2e-132 478.4 1049 40.8
Phvul.010G141800 Phaseolus vulgaris HOM05D004845 ORTHO05D005957 7.6e-127 459.1 1045 41.0
Lj3g0020048 Lotus japonicus HOM05D004845 ORTHO05D005957 6.0e-124 449.5 1000 41.0
Lalb_Chr04g0263091 Lupinus albus HOM05D004845 ORTHO05D005957 9.0e-112 409.1 1042 39.6
TPR.G8763 Trifolium pratense HOM05D004845 ORTHO05D005957 1.8e-104 384.8 933 40.2
Atru.chr1.3636 Acer truncatum HOM05D004845 ORTHO05D005957 5.9e-87 326.6 1052 34.9
QL05p015844 Quercus lobata HOM05D004845 ORTHO05D005957 1.7e-86 325.1 1068 35.3
RcHm_v2.0_Chr2g0142521 Rosa chinensis HOM05D004845 ORTHO05D005957 1.6e-84 318.5 1041 35.3
Medtr8g015610 Medicago truncatula HOM05D004845 ORTHO05D005957 7.4e-82 309.7 1010 32.9
CiPaw.02G142000 Carya illinoinensis HOM05D004845 ORTHO05D005957 1.4e-80 305.4 1043 35.2
Duzib160G0801 Durio zibethinus HOM05D004845 ORTHO05D005957 5.9e-79 300.1 1049 34.3
Thecc.06G108000 Theobroma cacao HOM05D004845 ORTHO05D005957 7.7e-79 299.7 1065 34.2
Cpa.g.sc131.35 Carica papaya HOM05D004845 ORTHO05D005957 2.2e-73 281.6 1060 32.5
FAN14G1946 Fragaria x ananassa HOM05D004845 ORTHO05D005957 3.7e-73 280.8 1047 33.6
Ciclev10024729m.g Citrus clementina HOM05D004845 ORTHO05D005957 8.2e-73 279.6 1081 32.7
Dinv30397 Davidia involucrata HOM05D004845 ORTHO05D005957 8.2e-73 279.6 1016 34.5
FAN02G0586 Fragaria x ananassa HOM05D004845 ORTHO05D005957 4.1e-72 277.3 1048 33.5
Prupe.3G052500 Prunus persica HOM05D004845 ORTHO05D005957 9.1e-72 276.2 1043 33.6
FAN09G4600 Fragaria x ananassa HOM05D004845 ORTHO05D005957 2.0e-71 275.0 1047 33.5
FvH4_6g32970 Fragaria vesca HOM05D004845 ORTHO05D005957 5.9e-71 273.5 1048 33.2
Cfa003605 Carpinus fangiana HOM05D004845 ORTHO05D005957 3.8e-70 270.8 1056 33.0
CANSAT56G3316 Cannabis sativa HOM05D004845 ORTHO05D005957 7.2e-69 266.5 1046 33.4
Dinv37932 Davidia involucrata HOM05D004845 ORTHO05D005957 3.6e-68 264.2 1041 33.1
Gohir.A05G133700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 2.0e-66 258.5 1050 33.4
Gohir.D05G135700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 2.8e-65 254.6 1049 33.4
Actinidia32134 Actinidia chinensis HOM05D004845 ORTHO05D005957 1.8e-64 251.9 1005 33.1
ClCG07G013620 Citrullus lanatus HOM05D004845 ORTHO05D005957 2.4e-64 251.5 1045 32.2
Gorai.009G139700 Gossypium raimondii HOM05D004845 ORTHO05D005957 7.0e-64 250.0 1033 32.8
Potri.003G033100 Populus trichocarpa HOM05D004845 ORTHO05D005957 3.8e-62 244.2 1071 31.3
TAR629G3185 Trochodendron aralioides HOM05D004845 ORTHO05D005957 3.8e-62 244.2 1082 32.7
Rhsim08G0231600 Rhododendron simsii HOM05D004845 ORTHO05D005957 2.5e-61 241.5 1052 32.3
CsaV3_3G044010 Cucumis sativus L. HOM05D004845 ORTHO05D005957 5.5e-61 240.4 1044 31.6
MD09G1196000 Malus domestica HOM05D004845 ORTHO05D005957 9.5e-61 239.6 1040 32.7
MELO3C013040.2 Cucumis melo HOM05D004845 ORTHO05D005957 1.2e-60 239.2 1053 31.4
GSVIVG01016889001 Vitis vinifera HOM05D004845 ORTHO05D005957 2.8e-60 238.0 933 30.5
Duzib235G0635 Durio zibethinus HOM05D004845 ORTHO05D005957 8.0e-60 236.5 1031 31.9
Sed0014548 Sechium edule HOM05D004845 ORTHO05D005957 2.0e-58 231.9 1048 31.2
Sed0023831 Sechium edule HOM05D004845 ORTHO05D005957 3.4e-58 231.1 1054 31.1
Sabra03G0019000 Salix brachista HOM05D004845 ORTHO05D005957 4.4e-58 230.7 1052 31.1
FAN05G2503 Fragaria x ananassa HOM05D004845 ORTHO05D005957 1.8e-56 225.3 1182 29.7
vmacro18819 Vaccinium macrocarpon HOM05D004845 ORTHO05D005957 1.2e-55 222.6 1025 31.3
Nn1g08771 Nelumbo nucifera HOM05D004845 ORTHO05D005957 7.8e-55 219.9 1083 31.1
Manes.04G137600 Manihot esculenta HOM05D004845 ORTHO05D005957 6.1e-52 210.3 1051 31.1
TWI31G1049 Tripterygium wilfordii HOM05D004845 ORTHO05D005957 6.1e-52 210.3 1051 31.9
Oeu052809.1 Olea europaea HOM05D004845 ORTHO05D005957 6.8e-51 206.8 1021 32.3
HanXRQChr09g0276331 Helianthus annuus HOM05D004845 ORTHO05D005957 4.1e-48 197.6 940 31.4
Sc12g0009860 Simmondsia chinensis HOM05D004845 ORTHO05D005957 3.5e-47 194.5 1018 30.3
Eucgr.J02886 Eucalyptus grandis HOM05D004845 ORTHO05D005957 7.8e-47 193.4 1014 31.5
MD17G1176700 Malus domestica HOM05D004845 ORTHO05D005957 7.3e-45 186.8 1051 30.0
CAN.G1668.10 Capsicum annuum HOM05D004845 ORTHO05D005957 9.5e-45 186.4 1042 30.4
Oeu026736.3 Olea europaea HOM05D004845 ORTHO05D005957 2.8e-44 184.9 920 28.6
THA.LOC104817934 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 8.0e-44 183.3 1088 26.9
Lsat_1_v5_gn_4_95940 Lactuca sativa HOM05D004845 ORTHO05D005957 3.1e-43 181.4 916 32.4
Peaxi162Scf00038g01322 Petunia axillaris HOM05D004845 ORTHO05D005957 4.0e-43 181.0 1061 30.4
Lj5C49T6 Lonicera japonica HOM05D004845 ORTHO05D005957 2.6e-42 178.3 950 27.2
Solyc03g121380.3 Solanum lycopersicum HOM05D004845 ORTHO05D005957 5.8e-42 177.2 1051 29.9
Sopen03g040190 Solanum pennellii HOM05D004845 ORTHO05D005957 1.3e-41 176.0 1054 30.3
THA.LOC104810560 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 2.9e-41 174.9 1071 25.5
Manes.11G028800 Manihot esculenta HOM05D004845 ORTHO05D005957 3.2e-40 171.4 1056 29.8
Migut.I01002 Erythranthe guttata HOM05D004845 ORTHO05D005957 1.2e-39 169.5 1031 29.6
DCAR_026375 Daucus carota HOM05D004845 ORTHO05D005957 3.5e-39 167.9 1053 29.7
Actinidia21742 Actinidia chinensis HOM05D004845 ORTHO05D005957 1.1e-37 162.9 801 27.0
EL10Ac9g21102 Beta vulgaris HOM05D004845 ORTHO05D005957 1.9e-37 162.2 1028 29.1
DCAR_007608 Daucus carota HOM05D004845 ORTHO05D005957 2.5e-37 161.8 945 31.1
Cc04_g02180 Coffea canephora HOM05D004845 ORTHO05D005957 3.3e-37 161.4 1058 30.2
ECA232G1750 Erigeron canadensis HOM05D004845 ORTHO05D005957 2.3e-35 155.2 976 29.7
Hund07666 Selenicereus undatus HOM05D004845 ORTHO05D005957 4.0e-35 154.5 1005 28.9
Thhalv10019924m.g Eutrema salsugineum HOM05D004845 ORTHO05D005957 1.5e-34 152.5 1027 27.8
Aqoxy7G00060 Aquilegia oxysepala HOM05D004845 ORTHO05D005957 5.8e-34 150.6 1083 29.6
Sp3g19330 Schrenkiella parvula HOM05D004845 ORTHO05D005957 9.9e-34 149.8 970 26.9
MSTRG.22604 Avicennia marina HOM05D004845 ORTHO05D005957 2.9e-33 148.3 1050 28.7
HanXRQChr05g0140141 Helianthus annuus HOM05D004845 ORTHO05D005957 4.1e-32 144.4 900 28.9
PSO170G6909 Papaver somniferum HOM05D004845 ORTHO05D005957 3.5e-31 141.4 998 30.4
AL3G35330 Arabidopsis lyrata HOM05D004845 ORTHO05D005957 4.6e-31 141.0 1034 27.3
AT3G21290 Arabidopsis thaliana HOM05D004845 ORTHO05D005957 1.0e-30 139.8 1028 28.4
CARHR097190 Cardamine hirsuta HOM05D004845 ORTHO05D005957 3.9e-30 137.9 985 29.0
PGR102G0505 Punica granatum HOM05D004845 ORTHO05D005957 5.1e-30 137.5 1008 30.4
SGA_v2.0_scaffold71G23747 Striga asiatica HOM05D004845 ORTHO05D005957 1.9e-29 135.6 894 26.8
CSS0001379 Camellia sinensis var. sinensis HOM05D004845 ORTHO05D005957 4.3e-29 134.4 826 31.1
Carub.0003s2130 Capsella rubella HOM05D004845 ORTHO05D005957 2.1e-28 132.1 1028 27.6
COL.COLO4_30609 Corchorus olitorius HOM05D004845 ORTHO05D005957 1.4e-27 129.4 964 23.4
Haze_15920 Corylus avellana HOM05D004845 ORTHO05D005957 3.1e-27 128.3 571 27.0
BcaC05g28184 Brassica carinata HOM05D004845 ORTHO05D005957 4.0e-27 127.9 954 28.5
C05p42240 Brassica napus HOM05D004845 ORTHO05D005957 4.0e-27 127.9 954 28.5
BolC5t32952H Brassica oleracea HOM05D004845 ORTHO05D005957 4.0e-27 127.9 954 28.5
Nitab4.5_0004848g0010 Nicotiana tabacum HOM05D004845 ORTHO05D005957 4.4e-26 124.4 864 30.8
Aa31LG8G7990 Aethionema arabicum HOM05D004845 ORTHO05D005957 5.8e-26 124.0 996 29.9
CDE10G0270 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 5.8e-26 124.0 1003 27.8
ATR0730G184 Amborella trichopoda HOM05D004845 ORTHO05D005957 1.3e-25 122.9 1082 27.7
BcaB06g26218 Brassica carinata HOM05D004845 ORTHO05D005957 1.4e-24 119.4 951 26.5
BraA05t21625Z Brassica rapa HOM05D004845 ORTHO05D005957 2.4e-24 118.6 941 27.3
Ca_23296_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 9.2e-24 116.7 231 40.3
A05p27330 Brassica napus HOM05D004845 ORTHO05D005957 1.2e-23 116.3 941 27.2
AUR62038325 Chenopodium quinoa HOM05D004845 ORTHO05D005957 2.1e-23 115.5 1017 24.3
Ca_23298_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 4.7e-20 104.4 114 48.2
CDE10G0326 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 8.1e-20 103.6 547 24.3
MBI01_g37799_MAGBIO Magnolia biondii HOM05D004845 ORTHO05D005957 3.1e-19 101.7 147 41.5
SGA_v2.0_scaffold45G16992 Striga asiatica HOM05D004845 ORTHO05D005957 4.0e-19 101.3 253 36.4
Haze_15921 Corylus avellana HOM05D004845 ORTHO05D005957 6.9e-19 100.5 224 38.4
Os03g0187100 Oryza sativa ssp. japonica HOM05D004845 ORTHO05D005957 5.8e-18 97.4 131 42.0
AUR62023919 Chenopodium quinoa HOM05D004845 ORTHO05D005957 9.9e-18 96.7 1030 22.7
CDE10G0876 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 4.9e-17 94.4 237 34.2
Lalb_Chr15g0087471 Lupinus albus HOM05D004845 ORTHO05D005957 8.4e-17 93.6 332 28.6
HPP92_028293 Vanilla planifolia HOM05D004845 ORTHO05D005957 1.9e-16 92.4 146 37.0
unitig_749.g14049 Utricularia gibba HOM05D004845 ORTHO05D005957 1.6e-15 89.4 105 43.8
BcaC09g49066 Brassica carinata HOM05D004845 ORTHO05D005957 2.1e-15 89.0 122 40.2
CBR_g20995 Chara braunii HOM05D004845 ORTHO05D005957 4.8e-12 77.8 156 34.6
unitig_749.g14048 Utricularia gibba HOM05D004845 ORTHO05D005957 6.2e-12 77.4 300 28.3
Duzib192G0218 Durio zibethinus HOM05D004845 ORTHO05D005957 3.1e-11 75.1 159 42.8
Atru.chr1.3631 Acer truncatum HOM05D001194 ORTHO05D005909 4.0e-11 74.7 276 28.3
Ah.01g016900 Amaranthus hybridus HOM05D004845 ORTHO05D005957 2.6e-10 72.0 1033 25.8
C01p42950 Brassica napus HOM05D004845 ORTHO05D005957 9.9e-10 70.1 100 42.0
SEGI_05846 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 4.9e-09 67.8 541 24.2
SHI11167 Sapria himalayana HOM05D004845 ORTHO05D005957 6.4e-09 67.4 216 31.0
Actinidia21743 Actinidia chinensis HOM05D004845 ORTHO05D005957 1.4e-08 66.2 126 44.4
Zm00001eb401540 Zea mays HOM05D004845 ORTHO05D005957 3.2e-08 65.1 1037 20.8
Mapoly0021s0057 Marchantia polymorpha HOM05D004845 ORTHO05D005957 9.3e-08 63.5 142 32.4
AagrBONN_evm.TU.Sc2ySwM_344.5033 Anthoceros agrestis HOM05D004845 ORTHO05D005957 8.7e-06 57.0 119 31.1


User provided reference genes

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