Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr14g0372871 Lupinus albus HOM05D004845 ORTHO05D005957 5.2e-116 421.0 204 100.0
GSVIVG01016889001 Vitis vinifera HOM05D004845 ORTHO05D005957 9.3e-57 224.2 201 59.7
Dinv37932 Davidia involucrata HOM05D004845 ORTHO05D005957 1.1e-54 217.2 197 62.4
arahy.Tifrunner.gnm1.ann1.7F0ZFP Arachis hypogaea HOM05D004845 ORTHO05D005957 1.9e-54 216.5 196 60.7
arahy.Tifrunner.gnm1.ann1.JSQ5P9 Arachis hypogaea HOM05D004845 ORTHO05D005957 2.5e-54 216.1 193 60.1
Duzib160G0801 Durio zibethinus HOM05D004845 ORTHO05D005957 1.3e-53 213.8 198 59.6
Thecc.06G108000 Theobroma cacao HOM05D004845 ORTHO05D005957 1.6e-53 213.4 196 60.2
Phvul.010G141800 Phaseolus vulgaris HOM05D004845 ORTHO05D005957 8.1e-53 211.1 189 63.5
Dinv30397 Davidia involucrata HOM05D004845 ORTHO05D005957 1.1e-52 210.7 167 66.5
Glyma.07G012400 Glycine max HOM05D004845 ORTHO05D005957 3.1e-52 209.1 189 62.4
Lalb_Chr04g0263091 Lupinus albus HOM05D004845 ORTHO05D005957 6.9e-52 208.0 184 64.1
Lj3g0020048 Lotus japonicus HOM05D004845 ORTHO05D005957 1.2e-51 207.2 179 64.2
Duzib235G0635 Durio zibethinus HOM05D004845 ORTHO05D005957 1.5e-51 206.8 195 57.9
vmacro18819 Vaccinium macrocarpon HOM05D004845 ORTHO05D005957 2.6e-51 206.1 195 56.9
Lj3g0006882 Lotus japonicus HOM05D004845 ORTHO05D005957 3.4e-51 205.7 178 62.4
QL05p015844 Quercus lobata HOM05D004845 ORTHO05D005957 3.4e-51 205.7 206 57.3
FAN09G4600 Fragaria x ananassa HOM05D004845 ORTHO05D005957 7.6e-51 204.5 199 57.3
DCAR_026375 Daucus carota HOM05D004845 ORTHO05D005957 1.3e-50 203.8 129 76.0
Nn1g08771 Nelumbo nucifera HOM05D004845 ORTHO05D005957 1.3e-50 203.8 156 67.3
RcHm_v2.0_Chr2g0142521 Rosa chinensis HOM05D004845 ORTHO05D005957 1.3e-50 203.8 180 60.0
Glyma.08G196100 Glycine max HOM05D004845 ORTHO05D005957 1.7e-50 203.4 189 61.9
Rhsim08G0231600 Rhododendron simsii HOM05D004845 ORTHO05D005957 1.7e-50 203.4 140 69.3
FvH4_6g32970 Fragaria vesca HOM05D004845 ORTHO05D005957 4.9e-50 201.8 199 57.3
FAN02G0586 Fragaria x ananassa HOM05D004845 ORTHO05D005957 4.9e-50 201.8 180 60.0
VMungo0331G0639 Vigna mungo HOM05D004845 ORTHO05D005957 4.9e-50 201.8 189 61.4
Manes.04G137600 Manihot esculenta HOM05D004845 ORTHO05D005957 8.4e-50 201.1 129 75.2
Manes.11G028800 Manihot esculenta HOM05D004845 ORTHO05D005957 1.1e-49 200.7 156 63.5
TWI31G1049 Tripterygium wilfordii HOM05D004845 ORTHO05D005957 1.1e-49 200.7 198 57.1
FAN14G1946 Fragaria x ananassa HOM05D004845 ORTHO05D005957 1.9e-49 199.9 199 56.8
Potri.003G033100 Populus trichocarpa HOM05D004845 ORTHO05D005957 2.5e-49 199.5 169 60.4
CANSAT56G3316 Cannabis sativa HOM05D004845 ORTHO05D005957 3.2e-49 199.1 140 69.3
Cfa003605 Carpinus fangiana HOM05D004845 ORTHO05D005957 5.5e-49 198.4 135 70.4
Gohir.D05G135700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 5.5e-49 198.4 194 56.2
TAR629G3185 Trochodendron aralioides HOM05D004845 ORTHO05D005957 5.5e-49 198.4 139 69.1
DCAR_007608 Daucus carota HOM05D004845 ORTHO05D005957 7.1e-49 198.0 182 59.9
MD17G1176700 Malus domestica HOM05D004845 ORTHO05D005957 7.1e-49 198.0 177 58.2
Gohir.A05G133700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 1.6e-48 196.8 194 55.7
Gorai.009G139700 Gossypium raimondii HOM05D004845 ORTHO05D005957 1.6e-48 196.8 194 55.7
PGR102G0505 Punica granatum HOM05D004845 ORTHO05D005957 1.6e-48 196.8 192 54.7
EL10Ac9g21102 Beta vulgaris HOM05D004845 ORTHO05D005957 3.5e-48 195.7 134 71.6
ClCG07G013620 Citrullus lanatus HOM05D004845 ORTHO05D005957 3.5e-48 195.7 198 54.5
COL.COLO4_30609 Corchorus olitorius HOM05D004845 ORTHO05D005957 3.5e-48 195.7 198 56.1
CsaV3_3G044010 Cucumis sativus L. HOM05D004845 ORTHO05D005957 3.5e-48 195.7 198 55.1
Sed0014548 Sechium edule HOM05D004845 ORTHO05D005957 1.0e-47 194.1 198 53.0
Ah.01g016900 Amaranthus hybridus HOM05D004845 ORTHO05D005957 1.8e-47 193.4 129 71.3
MELO3C013040.2 Cucumis melo HOM05D004845 ORTHO05D005957 1.8e-47 193.4 198 54.5
Cc04_g02180 Coffea canephora HOM05D004845 ORTHO05D005957 2.3e-47 193.0 129 72.9
Medtr8g015620 Medicago truncatula HOM05D004845 ORTHO05D005957 2.3e-47 193.0 184 60.3
MD09G1196000 Malus domestica HOM05D004845 ORTHO05D005957 3.0e-47 192.6 179 57.0
Prupe.3G052500 Prunus persica HOM05D004845 ORTHO05D005957 3.0e-47 192.6 132 68.9
Atru.chr1.3636 Acer truncatum HOM05D004845 ORTHO05D005957 5.1e-47 191.8 129 70.5
Ca_23299_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 5.1e-47 191.8 183 58.5
Sabra03G0019000 Salix brachista HOM05D004845 ORTHO05D005957 5.1e-47 191.8 166 59.6
CiPaw.02G142000 Carya illinoinensis HOM05D004845 ORTHO05D005957 6.7e-47 191.4 202 55.4
Oeu026736.3 Olea europaea HOM05D004845 ORTHO05D005957 1.5e-46 190.3 196 54.1
Hund07666 Selenicereus undatus HOM05D004845 ORTHO05D005957 1.9e-46 189.9 138 68.1
AUR62023919 Chenopodium quinoa HOM05D004845 ORTHO05D005957 3.3e-46 189.1 144 64.6
A05p27330 Brassica napus HOM05D004845 ORTHO05D005957 4.3e-46 188.7 129 69.0
BraA05t21625Z Brassica rapa HOM05D004845 ORTHO05D005957 4.3e-46 188.7 129 69.0
ECA232G1750 Erigeron canadensis HOM05D004845 ORTHO05D005957 4.3e-46 188.7 198 54.5
BcaB06g26218 Brassica carinata HOM05D004845 ORTHO05D005957 5.7e-46 188.3 129 68.2
MSTRG.22604 Avicennia marina HOM05D004845 ORTHO05D005957 7.4e-46 188.0 193 56.0
BcaC05g28184 Brassica carinata HOM05D004845 ORTHO05D005957 9.6e-46 187.6 129 68.2
C05p42240 Brassica napus HOM05D004845 ORTHO05D005957 9.6e-46 187.6 129 68.2
BolC5t32952H Brassica oleracea HOM05D004845 ORTHO05D005957 9.6e-46 187.6 129 68.2
Lsat_1_v5_gn_4_95940 Lactuca sativa HOM05D004845 ORTHO05D005957 1.3e-45 187.2 193 54.4
Nitab4.5_0004848g0010 Nicotiana tabacum HOM05D004845 ORTHO05D005957 1.6e-45 186.8 129 70.5
HPP92_028291 Vanilla planifolia HOM05D004845 ORTHO05D005957 1.6e-45 186.8 156 64.1
Zm00001eb006560 Zea mays HOM05D004845 ORTHO05D005957 1.6e-45 186.8 175 57.7
Sc12g0009860 Simmondsia chinensis HOM05D004845 ORTHO05D005957 2.1e-45 186.4 189 57.1
PSO170G6909 Papaver somniferum HOM05D004845 ORTHO05D005957 2.8e-45 186.0 156 60.9
AUR62038325 Chenopodium quinoa HOM05D004845 ORTHO05D005957 4.8e-45 185.3 144 62.5
SGA_v2.0_scaffold45G16992 Striga asiatica HOM05D004845 ORTHO05D005957 4.8e-45 185.3 194 54.1
Thhalv10019924m.g Eutrema salsugineum HOM05D004845 ORTHO05D005957 6.3e-45 184.9 136 65.4
HanXRQChr09g0276331 Helianthus annuus HOM05D004845 ORTHO05D005957 6.3e-45 184.9 189 54.5
Sp3g19330 Schrenkiella parvula HOM05D004845 ORTHO05D005957 8.2e-45 184.5 129 66.7
CDE10G0270 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 1.1e-44 184.1 193 56.5
Aqoxy7G00060 Aquilegia oxysepala HOM05D004845 ORTHO05D005957 1.4e-44 183.7 129 69.8
THA.LOC104817934 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 1.4e-44 183.7 137 65.0
AL3G35330 Arabidopsis lyrata HOM05D004845 ORTHO05D005957 3.1e-44 182.6 142 64.1
Carub.0003s2130 Capsella rubella HOM05D004845 ORTHO05D005957 3.1e-44 182.6 168 57.7
Aa31LG8G7990 Aethionema arabicum HOM05D004845 ORTHO05D005957 4.1e-44 182.2 139 63.3
Migut.I01002 Erythranthe guttata HOM05D004845 ORTHO05D005957 4.1e-44 182.2 184 57.1
ATR0730G184 Amborella trichopoda HOM05D004845 ORTHO05D005957 5.3e-44 181.8 168 56.5
CDE10G0876 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 5.3e-44 181.8 192 56.2
HanXRQChr05g0140141 Helianthus annuus HOM05D004845 ORTHO05D005957 1.5e-43 180.3 193 53.4
Actinidia21743 Actinidia chinensis HOM05D004845 ORTHO05D005957 2.6e-43 179.5 198 52.5
AT3G21290 Arabidopsis thaliana HOM05D004845 ORTHO05D005957 3.4e-43 179.1 129 65.9
THA.LOC104810560 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 3.4e-43 179.1 195 51.3
Sed0023831 Sechium edule HOM05D004845 ORTHO05D005957 1.3e-42 177.2 199 51.3
Sopen03g040190 Solanum pennellii HOM05D004845 ORTHO05D005957 1.3e-42 177.2 202 52.5
Zm00001eb401540 Zea mays HOM05D004845 ORTHO05D005957 1.3e-42 177.2 177 54.2
Solyc03g121380.3 Solanum lycopersicum HOM05D004845 ORTHO05D005957 3.8e-42 175.6 209 51.2
SGA_v2.0_scaffold71G23747 Striga asiatica HOM05D004845 ORTHO05D005957 5.0e-42 175.3 189 53.4
Ciclev10024729m.g Citrus clementina HOM05D004845 ORTHO05D005957 1.9e-41 173.3 136 65.4
CAN.G1668.10 Capsicum annuum HOM05D004845 ORTHO05D005957 4.2e-41 172.2 120 68.3
Peaxi162Scf00038g01322 Petunia axillaris HOM05D004845 ORTHO05D005957 1.2e-40 170.6 152 56.6
FAN05G2503 Fragaria x ananassa HOM05D004845 ORTHO05D005957 7.9e-40 167.9 209 49.3
SEGI_05846 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 1.1e-38 164.1 129 61.2
SEGI_07021 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 1.1e-38 164.1 129 61.2
BcaC09g49066 Brassica carinata HOM05D004845 ORTHO05D005957 4.1e-36 155.6 189 49.7
unitig_749.g14048 Utricularia gibba HOM05D004845 ORTHO05D005957 7.7e-35 151.4 174 48.9
C01p42960 Brassica napus HOM05D004845 ORTHO05D005957 3.8e-34 149.1 130 58.5
Lalb_Chr15g0087461 Lupinus albus HOM05D004845 ORTHO05D005957 5.0e-34 148.7 79 93.7
BolC1t04240H Brassica oleracea HOM05D004845 ORTHO05D005957 8.5e-34 147.9 144 54.9
Duzib192G0218 Durio zibethinus HOM05D004845 ORTHO05D005957 5.5e-33 145.2 91 76.9
Mapoly0021s0057 Marchantia polymorpha HOM05D004845 ORTHO05D005957 4.5e-27 125.6 138 47.1
Pp3c12_1570 Physcomitrium patens HOM05D004845 ORTHO05D005957 5.9e-27 125.2 135 46.7
AagrBONN_evm.TU.Sc2ySwM_344.5033 Anthoceros agrestis HOM05D004845 ORTHO05D005957 2.5e-25 119.8 150 45.3
SMO334G0114 Selaginella moellendorffii HOM05D004845 ORTHO05D005957 5.5e-25 118.6 130 44.6
SHI11164 Sapria himalayana HOM05D004845 ORTHO05D003034 3.3e-22 109.4 61 80.3
Oeu052809.1 Olea europaea HOM05D004845 ORTHO05D005957 2.8e-21 106.3 60 86.7
Cpa.g.sc131.35 Carica papaya HOM05D004845 ORTHO05D005957 6.3e-21 105.1 59 89.8
CBR_g20996 Chara braunii HOM05D004845 ORTHO05D005957 3.8e-18 95.9 132 39.4
Zm00001eb424050 Zea mays HOM05D002942 ORTHO05D003270 5.2e-15 85.5 60 63.3
Actinidia32135 Actinidia chinensis HOM05D004845 ORTHO05D005957 2.6e-14 83.2 129 40.3
TPR.G8763 Trifolium pratense HOM05D004845 ORTHO05D005957 4.4e-14 82.4 107 43.9
Cpa.g.sc131.32 Carica papaya HOM05D004845 ORTHO05D005957 7.0e-12 75.1 125 41.6
Medtr1g021875 Medicago truncatula HOM05D004845 ORTHO05D005957 2.9e-10 69.7 58 65.5
PGSC0003DMG400002508 Solanum tuberosum HOM05D004845 ORTHO05D005957 4.7e-08 62.4 131 38.2


User provided reference genes

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