Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr14g0372461 Lupinus albus HOM05D007749 ORTHO05D009809 3.7e-80 301.6 165 100.0
Glyma.13G344000 Glycine max HOM05D007749 ORTHO05D009809 1.0e-45 187.2 124 77.4
Lj3g0008958 Lotus japonicus HOM05D007749 ORTHO05D009809 5.1e-45 184.9 130 74.6
Phvul.005G152700 Phaseolus vulgaris HOM05D007749 ORTHO05D009809 2.1e-43 179.5 124 75.8
VMungo1080G1081 Vigna mungo HOM05D007749 ORTHO05D009809 8.1e-43 177.6 124 75.0
Manes.11G120200 Manihot esculenta HOM05D007749 ORTHO05D009809 4.0e-42 175.3 118 71.2
Psat1g007040 Pisum sativum HOM05D007749 ORTHO05D009809 5.2e-42 174.9 115 76.5
TAR633G0982 Trochodendron aralioides HOM05D007749 ORTHO05D009809 2.0e-41 172.9 115 74.8
CANSAT56G0324 Cannabis sativa HOM05D007749 ORTHO05D009809 2.6e-41 172.6 116 71.6
CANSAT56G2176 Cannabis sativa HOM05D007749 ORTHO05D009809 2.6e-41 172.6 116 71.6
ClCG08G004660 Citrullus lanatus HOM05D007749 ORTHO05D009809 3.4e-41 172.2 116 75.0
CsaV3_6G003910 Cucumis sativus L. HOM05D007749 ORTHO05D009809 3.4e-41 172.2 116 75.0
Dinv44193 Davidia involucrata HOM05D006659 ORTHO05D008372 4.4e-41 171.8 115 73.0
MELO3C011656.2 Cucumis melo HOM05D007749 ORTHO05D009809 9.9e-41 170.6 117 73.5
Rhsim09G0028100 Rhododendron simsii HOM05D007749 ORTHO05D009809 1.7e-40 169.9 115 74.8
MD04G1040200 Malus domestica HOM05D007749 ORTHO05D009809 6.4e-40 167.9 116 74.1
Lsat_1_v5_gn_5_23460 Lactuca sativa HOM05D007749 ORTHO05D009809 1.2e-38 163.7 115 67.0
Sed0008576 Sechium edule HOM05D007749 ORTHO05D009809 1.2e-38 163.7 115 71.3
Medtr2g098870 Medicago truncatula HOM05D007749 ORTHO05D009809 3.5e-38 162.2 118 68.6
AUR62000855 Chenopodium quinoa HOM05D007749 ORTHO05D009809 7.8e-38 161.0 115 69.6
CDE04G2919 Ceratophyllum demersum HOM05D007749 ORTHO05D009809 5.1e-37 158.3 115 67.8
AUR62005121 Chenopodium quinoa HOM05D007749 ORTHO05D009809 8.6e-37 157.5 115 67.0
Oeu037445.1 Olea europaea HOM05D007749 ORTHO05D009809 8.6e-37 157.5 115 64.3
GSVIVG01010752001 Vitis vinifera HOM05D007749 ORTHO05D009809 1.5e-36 156.8 107 69.2
CDE07G1555 Ceratophyllum demersum HOM05D007749 ORTHO05D009809 1.9e-36 156.4 115 67.0
PGR142G0736 Punica granatum HOM05D007749 ORTHO05D009809 7.3e-36 154.5 125 65.6
Duzib151G1147 Durio zibethinus HOM05D007749 ORTHO05D009809 9.6e-36 154.1 121 60.3
Eucgr.H00373 Eucalyptus grandis HOM05D007749 ORTHO05D009809 1.2e-35 153.7 119 67.2
THA.LOC104803661 Tarenaya hassleriana HOM05D007749 ORTHO05D009809 1.6e-35 153.3 118 65.3
Glyma.15G030300 Glycine max HOM05D007749 ORTHO05D009809 3.6e-35 152.1 106 71.7
ECA246G4014 Erigeron canadensis HOM05D007749 ORTHO05D009809 4.7e-35 151.8 115 64.3
BcaB06g29301 Brassica carinata HOM05D007749 ORTHO05D009809 6.2e-35 151.4 118 66.1
C04p70340 Brassica napus HOM05D007749 ORTHO05D009809 6.2e-35 151.4 118 66.1
BolC4t28537H Brassica oleracea HOM05D007749 ORTHO05D009809 6.2e-35 151.4 118 66.1
Sp4g25410 Schrenkiella parvula HOM05D007749 ORTHO05D009809 6.2e-35 151.4 117 65.8
COL.COLO4_07660 Corchorus olitorius HOM05D007749 ORTHO05D009809 8.1e-35 151.0 118 62.7
Aa31LG1G25110 Aethionema arabicum HOM05D007749 ORTHO05D009809 1.1e-34 150.6 118 64.4
BcaC02g07190 Brassica carinata HOM05D007749 ORTHO05D009809 1.1e-34 150.6 118 66.1
A04p32650 Brassica napus HOM05D007749 ORTHO05D009809 1.1e-34 150.6 118 66.1
BraA04t18728Z Brassica rapa HOM05D007749 ORTHO05D009809 1.1e-34 150.6 118 66.1
Thhalv10001764m.g Eutrema salsugineum HOM05D007749 ORTHO05D009809 4.0e-34 148.7 118 63.6
Potri.017G030200 Populus trichocarpa HOM05D007749 ORTHO05D009809 5.2e-34 148.3 120 65.8
CARHR138400 Cardamine hirsuta HOM05D007749 ORTHO05D009809 6.9e-34 147.9 118 62.7
Thecc.04G180100 Theobroma cacao HOM05D007749 ORTHO05D009809 1.2e-33 147.1 122 58.2
Nitab4.5_0005487g0020 Nicotiana tabacum HOM05D002689 ORTHO05D003129 2.0e-33 146.4 122 61.5
AT2G43310 Arabidopsis thaliana HOM05D007749 ORTHO05D009809 4.4e-33 145.2 118 62.7
Migut.B01511 Erythranthe guttata HOM05D007749 ORTHO05D009809 5.8e-33 144.8 115 61.7
FvH4_4g10741 Fragaria vesca HOM05D007749 ORTHO05D009809 5.8e-33 144.8 115 66.1
Gohir.D10G129800 Gossypium hirsutum HOM05D007749 ORTHO05D009809 5.8e-33 144.8 118 57.6
Sabra07G0104500 Salix brachista HOM05D007749 ORTHO05D009809 5.8e-33 144.8 120 66.7
Gohir.A10G136900 Gossypium hirsutum HOM05D007749 ORTHO05D009809 9.9e-33 144.1 118 56.8
PGSC0003DMG400020513 Solanum tuberosum HOM05D007749 ORTHO05D009809 9.9e-33 144.1 115 62.6
AL4G41990 Arabidopsis lyrata HOM05D007749 ORTHO05D009809 1.7e-32 143.3 122 59.8
SalBow7G2644 Salvia bowleyana HOM05D007749 ORTHO05D009809 2.2e-32 142.9 115 58.3
Sopen08g003040 Solanum pennellii HOM05D007749 ORTHO05D009809 2.2e-32 142.9 115 60.9
MD07G1093600 Malus domestica HOM05D007749 ORTHO05D009809 2.9e-32 142.5 100 73.0
SGA_v2.0_scaffold52G19242 Striga asiatica HOM05D007749 ORTHO05D009809 2.9e-32 142.5 118 59.3
Ca_01260_v3 Cicer arietinum L. HOM05D007749 ORTHO05D009809 3.8e-32 142.1 92 73.9
QL10p048728 Quercus lobata HOM05D007749 ORTHO05D009809 3.8e-32 142.1 115 62.6
TWI15G0305 Tripterygium wilfordii HOM05D007749 ORTHO05D009809 4.9e-32 141.7 118 58.5
TWI15G0741 Tripterygium wilfordii HOM05D007749 ORTHO05D009809 4.9e-32 141.7 118 58.5
Atru.chr3.1496 Acer truncatum HOM05D007749 ORTHO05D009809 6.4e-32 141.4 118 58.5
CAN.G845.29 Capsicum annuum HOM05D007749 ORTHO05D009809 6.4e-32 141.4 115 63.5
Cc00_g14450 Coffea canephora HOM05D007749 ORTHO05D009809 6.4e-32 141.4 115 59.1
Gorai.011G143100 Gossypium raimondii HOM05D007749 ORTHO05D009809 6.4e-32 141.4 118 55.9
HanXRQChr02g0051151 Helianthus annuus HOM05D007749 ORTHO05D009809 6.4e-32 141.4 117 57.3
Potri.007G128100 Populus trichocarpa HOM05D007749 ORTHO05D009809 8.4e-32 141.0 120 65.0
Aqoxy7G01782 Aquilegia oxysepala HOM05D007749 ORTHO05D009809 1.1e-31 140.6 116 59.5
DCAR_008501 Daucus carota HOM05D007749 ORTHO05D009809 1.1e-31 140.6 116 59.5
Sc25g0002390 Simmondsia chinensis HOM05D007749 ORTHO05D009809 1.1e-31 140.6 103 68.9
CiPaw.02G055000 Carya illinoinensis HOM05D007749 ORTHO05D009809 1.4e-31 140.2 133 56.4
Aqoxy7G01786 Aquilegia oxysepala HOM05D007749 ORTHO05D009809 1.9e-31 139.8 116 58.6
Carub.0004s2577 Capsella rubella HOM05D007749 ORTHO05D009809 7.1e-31 137.9 117 59.0
Ciclev10022681m.g Citrus clementina HOM05D007749 ORTHO05D009809 1.0e-29 134.0 120 55.8
unitig_61.g26426 Utricularia gibba HOM05D007749 ORTHO05D009809 1.9e-28 129.8 127 48.8
MD07G1010900 Malus domestica HOM05D007749 ORTHO05D009809 3.3e-28 129.0 103 67.0
BcaB06g29300 Brassica carinata HOM05D007749 ORTHO05D009809 5.6e-28 128.3 92 72.8
Prupe.1G192700 Prunus persica HOM05D007749 ORTHO05D009809 7.3e-28 127.9 103 68.0
Sc04g0006060 Simmondsia chinensis HOM05D007749 ORTHO05D009809 2.1e-27 126.3 95 68.4
ATR0824G043 Amborella trichopoda HOM05D007749 ORTHO05D009809 3.6e-27 125.6 132 44.7
HPP92_012796 Vanilla planifolia HOM05D007749 ORTHO05D009809 6.9e-26 121.3 122 54.9
Prupe.1G193800 Prunus persica HOM05D007749 ORTHO05D009809 1.4e-23 113.6 90 66.7
PGSC0003DMG400020496 Solanum tuberosum HOM05D007749 ORTHO05D009809 3.5e-22 109.0 89 60.7
QL02p093050 Quercus lobata HOM05D000759 ORTHO05D000574 2.5e-20 102.8 100 56.0
Nitab4.5_0010461g0010 Nicotiana tabacum HOM05D002689 ORTHO05D003129 1.4e-18 97.1 77 62.3
SEGI_37948 Sequoiadendron giganteum HOM05D007749 ORTHO05D009809 2.0e-17 93.2 112 38.4
Actinidia35976 Actinidia chinensis HOM05D007749 ORTHO05D009809 7.6e-17 91.3 115 47.8
Actinidia34603 Actinidia chinensis HOM05D007749 ORTHO05D009809 1.7e-16 90.1 117 48.7
QL04p015298 Quercus lobata HOM05D007749 ORTHO05D009809 2.9e-16 89.4 89 53.9
HPP92_012728 Vanilla planifolia HOM05D007749 ORTHO05D009809 1.9e-15 86.7 122 46.7
vmacro02359 Vaccinium macrocarpon HOM05D007749 ORTHO05D009809 1.5e-12 77.0 51 68.6
SEGI_10158 Sequoiadendron giganteum HOM05D007749 ORTHO05D009809 9.6e-12 74.3 83 41.0
MD08G1180100 Malus domestica HOM05D007749 ORTHO05D009809 3.7e-11 72.4 52 73.1


User provided reference genes

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